RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 VDAC2P45880 294 aaPredicted RBP12.33□□□□□ -0.43
NDC1-201ENST00000371429 RND3P61587 244 aa12.33□□□□□ -0.43
NDC1-201ENST00000371429 ZNF841Q6ZN19 808 aa12.33□□□□□ -0.43
NDC1-201ENST00000371429 AMY1AP04745 511 aa12.33□□□□□ -0.44
NDC1-201ENST00000371429 CD81P60033 236 aa12.33□□□□□ -0.44
NDC1-201ENST00000371429 RELBQ01201 579 aa12.33□□□□□ -0.44
NDC1-201ENST00000371429 VAMP3Q15836 100 aa12.33□□□□□ -0.44
NDC1-201ENST00000371429 CLDND2Q8NHS1 167 aa12.33□□□□□ -0.44
NDC1-201ENST00000371429 SGK494Q96LW2 274 aa12.33□□□□□ -0.44
NDC1-201ENST00000371429 MAP1LC3CQ9BXW4 147 aa12.33□□□□□ -0.44
NDC1-201ENST00000371429 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.33□□□□□ -0.44
NDC1-201ENST00000371429 PLA2G2CQ5R387 149 aa12.33□□□□□ -0.44
NDC1-201ENST00000371429 GOLT1AQ6ZVE7 132 aa12.33□□□□□ -0.44
NDC1-201ENST00000371429 CBLN2Q8IUK8 224 aa12.33□□□□□ -0.44
NDC1-201ENST00000371429 GALNT14Q96FL9 552 aa12.33□□□□□ -0.44
NDC1-201ENST00000371429 IGHV3OR16-8A0A075B7F1 116 aa12.33□□□□□ -0.44
NDC1-201ENST00000371429 TRBV6-7A0A0A0MS04 114 aa12.33□□□□□ -0.44
NDC1-201ENST00000371429 CRYBB3P26998 211 aa12.33□□□□□ -0.44
NDC1-201ENST00000371429 MBNL2Q5VZF2 373 aaKnown RBP12.33□□□□□ -0.44
NDC1-201ENST00000371429 UBE2L6O14933 153 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 TMEM177Q53S58 311 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 GLRX5Q86SX6 157 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 CHAC2Q8WUX2 184 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 WNT10AQ9GZT5 417 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 ANK1P16157 1881 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 RRHO14718 337 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 MEOX2P50222 304 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 SIGIRRQ6IA17 410 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 FAM159AQ6UWV7 190 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 PAQR4Q8N4S7 273 aaPredicted RBP12.32□□□□□ -0.44
NDC1-201ENST00000371429 ITLN2Q8WWU7 325 aaPredicted RBP12.32□□□□□ -0.44
NDC1-201ENST00000371429 SPSB4Q96A44 273 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 NABP1Q96AH0 204 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 DOCK7Q96N67 2140 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 LOC389332A0A1B0GUA5 103 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 NBL1P41271 181 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 MORN2Q502X0 79 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 GSX1Q9H4S2 264 aaPredicted RBP12.32□□□□□ -0.44
NDC1-201ENST00000371429 FREM3P0C091 2139 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 NOTCH2Q04721 2471 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 TRAV24A0A0B4J272 114 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 PRR32B1ATL7 298 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 SRRM5B3KS81 715 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 HSPB1P04792 205 aaKnown RBP12.32□□□□□ -0.44
NDC1-201ENST00000371429 SAA1P0DJI8 122 aaPredicted RBP12.32□□□□□ -0.44
NDC1-201ENST00000371429 GAS1P54826 345 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 RPS20P60866 119 aaKnown RBP12.32□□□□□ -0.44
NDC1-201ENST00000371429 FAM53AQ6NSI3 398 aaPredicted RBP12.32□□□□□ -0.44
NDC1-201ENST00000371429 OR8A1Q8NGG7 326 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 KLHDC3Q9BQ90 382 aa12.32□□□□□ -0.44
NDC1-201ENST00000371429 FOXI3A8MTJ6 420 aaPredicted RBP12.31□□□□□ -0.44
NDC1-201ENST00000371429 DLX1P56177 255 aa12.31□□□□□ -0.44
NDC1-201ENST00000371429 C12orf57Q99622 126 aa12.31□□□□□ -0.44
NDC1-201ENST00000371429 AP5S1Q9NUS5 200 aa12.31□□□□□ -0.44
NDC1-201ENST00000371429 CRXO43186 299 aaPredicted RBP12.31□□□□□ -0.44
NDC1-201ENST00000371429 CKS2P33552 79 aa12.31□□□□□ -0.44
NDC1-201ENST00000371429 TMEM183BQ1AE95 376 aa12.31□□□□□ -0.44
NDC1-201ENST00000371429 ZNF497Q6ZNH5 498 aa12.31□□□□□ -0.44
NDC1-201ENST00000371429 SSC4DQ8WTU2 575 aa12.31□□□□□ -0.44
NDC1-201ENST00000371429 SRSF12Q8WXF0 261 aaKnown RBP12.31□□□□□ -0.44
NDC1-201ENST00000371429 F12P00748 615 aaPredicted RBP12.31□□□□□ -0.44
NDC1-201ENST00000371429 ZNF660Q6AZW8 331 aaPredicted RBP12.31□□□□□ -0.44
NDC1-201ENST00000371429 DHRS11Q6UWP2 260 aa12.31□□□□□ -0.44
NDC1-201ENST00000371429 B4DSR2 109 aa12.31□□□□□ -0.44
NDC1-201ENST00000371429 AREGP15514 252 aa12.31□□□□□ -0.44
NDC1-201ENST00000371429 C8orf46Q8TAG6 207 aa12.31□□□□□ -0.44
NDC1-201ENST00000371429 HEATR1Q9H583 2144 aaKnown RBP12.31□□□□□ -0.44
NDC1-201ENST00000371429 ZSWIM8A7E2V4 1837 aa12.31□□□□□ -0.44
NDC1-201ENST00000371429 IL6RP08887 468 aaPredicted RBP12.3□□□□□ -0.44
NDC1-201ENST00000371429 ICAM4Q14773 271 aa12.3□□□□□ -0.44
NDC1-201ENST00000371429 GTF3AQ92664 365 aaKnown RBP12.3□□□□□ -0.44
NDC1-201ENST00000371429 PEMTQ9UBM1 199 aa12.3□□□□□ -0.44
NDC1-201ENST00000371429 NOTCH3Q9UM47 2321 aa12.3□□□□□ -0.44
NDC1-201ENST00000371429 TIMM23O14925 209 aa12.3□□□□□ -0.44
NDC1-201ENST00000371429 C19orf54Q5BKX5 351 aa12.3□□□□□ -0.44
NDC1-201ENST00000371429 A0A087WV48 116 aa12.3□□□□□ -0.44
NDC1-201ENST00000371429 TRAV34A0A0B4J273 112 aa12.3□□□□□ -0.44
NDC1-201ENST00000371429 CD99P14209 185 aa12.3□□□□□ -0.44
NDC1-201ENST00000371429 ZNF250P15622 560 aa12.3□□□□□ -0.44
NDC1-201ENST00000371429 RPL29P47914 159 aaKnown RBP12.3□□□□□ -0.44
NDC1-201ENST00000371429 PRR30Q53SZ7 412 aaPredicted RBP12.3□□□□□ -0.44
NDC1-201ENST00000371429 C1QTNF9BB2RNN3 333 aa12.3□□□□□ -0.44
NDC1-201ENST00000371429 C1QTNF9P0C862 333 aa12.3□□□□□ -0.44
NDC1-201ENST00000371429 CD69Q07108 199 aa12.3□□□□□ -0.44
NDC1-201ENST00000371429 FAM74A4Q5TZK3 123 aa12.3□□□□□ -0.44
NDC1-201ENST00000371429 SH3BGRL3Q9H299 93 aa12.3□□□□□ -0.44
NDC1-201ENST00000371429 FBLN5Q9UBX5 448 aa12.3□□□□□ -0.44
NDC1-201ENST00000371429 HSPB8Q9UJY1 196 aa12.3□□□□□ -0.44
NDC1-201ENST00000371429 C11orf44Q8N8P7 122 aa12.29□□□□□ -0.44
NDC1-201ENST00000371429 DMRTA2Q96SC8 542 aa12.29□□□□□ -0.44
NDC1-201ENST00000371429 GGACTQ9BVM4 153 aa12.29□□□□□ -0.44
NDC1-201ENST00000371429 NBEAP1P0C6P0 100 aa12.29□□□□□ -0.44
NDC1-201ENST00000371429 SAPCD1Q5SSQ6 148 aa12.29□□□□□ -0.44
NDC1-201ENST00000371429 PRSS33Q8NF86 280 aa12.29□□□□□ -0.44
NDC1-201ENST00000371429 GCHFRP30047 84 aa12.29□□□□□ -0.44
NDC1-201ENST00000371429 B3GALT5-AS1P59052 145 aa12.29□□□□□ -0.44
NDC1-201ENST00000371429 SMUG1Q53HV7 270 aa12.29□□□□□ -0.44
NDC1-201ENST00000371429 CACNG8Q8WXS5 425 aa12.29□□□□□ -0.44
NDC1-201ENST00000371429 AP4M1O00189 453 aa12.29□□□□□ -0.44
NDC1-201ENST00000371429 WNT2P09544 360 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms