RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 GNB3P16520 340 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 RPL7P18124 248 aaKnown RBP3.09□□□□□ -1.91
MCF2-203ENST00000370576 MAP2K3P46734 347 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 GLT8D1Q68CQ7 371 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 ZNF664Q8N3J9 261 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 YIPF7Q8N8F6 280 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 SPTSSAQ969W0 71 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 TMEM106AQ96A25 262 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 C18orf12Q96KH6 178 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 SIGMAR1Q99720 223 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 SPANXA1Q9NS26 97 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 KAAG1Q9UBP8 84 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 MCTS1Q9ULC4 181 aaKnown RBP3.09□□□□□ -1.91
MCF2-203ENST00000370576 SEC14L6B5MCN3 397 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 M0R135 149 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 CCL21O00585 134 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 HPRT1P00492 218 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 RBP4P02753 201 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 ZNF32P17041 273 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 MDH2P40926 338 aaKnown RBP3.09□□□□□ -1.91
MCF2-203ENST00000370576 REG1BP48304 166 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 RBM11P57052 281 aaKnown RBP3.09□□□□□ -1.91
MCF2-203ENST00000370576 RAB2AP61019 212 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 SUPT4H1P63272 117 aaKnown RBP3.09□□□□□ -1.91
MCF2-203ENST00000370576 FOXC1Q12948 553 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 TAB1Q15750 504 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 MSMPQ1L6U9 139 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 LINC00242Q5T6M2 205 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 OTPQ5XKR4 325 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 ZNF497Q6ZNH5 498 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 OR13G1Q8NGZ3 307 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 ZFAND1Q8TCF1 268 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 DYRK2Q92630 601 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 TMEM18Q96B42 140 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 ZNF799Q96GE5 643 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 TBX5Q99593 518 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 SULT4A1Q9BR01 284 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 FXYD6Q9H0Q3 95 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 CFAP54Q96N23 3096 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 CABIN1Q9Y6J0 2220 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 SPEGQ15772 3267 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 FREM2Q5SZK8 3169 aa3.09□□□□□ -1.91
MCF2-203ENST00000370576 TMEM269A0A1B0GVZ9 245 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 RNF212BA8MTL3 300 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 ZNF736B4DX44 427 aaPredicted RBP3.09□□□□□ -1.92
MCF2-203ENST00000370576 J3QRK9 145 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 K7EM74 188 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 RHODO00212 210 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 IGHV4-31P0DP07 118 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 ARL9Q6T311 187 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 Q6ZR03 302 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 Q6ZTK2 550 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 Q6ZVH6 145 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 AAED1Q7RTV5 226 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 ZNF439Q8NDP4 499 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 BEST4Q8NFU0 473 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 OR11H7Q8NGC8 314 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 OR1S1Q8NH92 325 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 RITA1Q96K30 269 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 SPATA25Q9BR10 227 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 IFI27L2Q9H2X8 130 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 LIME1Q9H400 295 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 CST9LQ9H4G1 147 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 MED13Q9UHV7 2174 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 AKAP13Q12802 2813 aa3.09□□□□□ -1.92
MCF2-203ENST00000370576 CORTO00230 105 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 NDUFB8O95169 186 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 SNRPBP14678 240 aaKnown RBP3.08□□□□□ -1.92
MCF2-203ENST00000370576 CD34P28906 385 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 TCL1AP56279 114 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 LMO4P61968 165 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 KISS1Q15726 138 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 C1QL2Q7Z5L3 287 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 Q8IYB0 196 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 ZFP41Q8N8Y5 198 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 OR10G4Q8NGN3 311 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 GPR146Q96CH1 333 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 PIK3IP1Q96FE7 263 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 SDSLQ96GA7 329 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 SLC25A33Q9BSK2 321 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 GPR84Q9NQS5 396 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 VAX2Q9UIW0 290 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 KLLNB2CW77 178 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 F5H5K5 113 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 PDE6DO43924 150 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 GGCTO75223 188 aaKnown RBP3.08□□□□□ -1.92
MCF2-203ENST00000370576 ZNF737O75373 536 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 OR5AL1P0C617 328 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 CA7P43166 264 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 IAH1Q2TAA2 248 aaPredicted RBP3.08□□□□□ -1.92
MCF2-203ENST00000370576 CDNFQ49AH0 187 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 C10orf91Q5T1B1 145 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 TEX261Q6UWH6 196 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 ODF3L1Q8IXM7 274 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 SYT8Q8NBV8 401 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 OR5B3Q8NH48 314 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 REEP6Q96HR9 211 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 KIR2DL4Q99706 377 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 NDFIP1Q9BT67 221 aa3.08□□□□□ -1.92
MCF2-203ENST00000370576 SLC25A39Q9BZJ4 359 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms