RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 SAA2-SAA4A0A096LPE2 208 aa16.5■□□□□ 0.23
LMO4-202ENST00000370544 SAA2P0DJI9 122 aaPredicted RBP16.5■□□□□ 0.23
LMO4-202ENST00000370544 CDKN1AP38936 164 aa16.5■□□□□ 0.23
LMO4-202ENST00000370544 SMUG1Q53HV7 270 aa16.5■□□□□ 0.23
LMO4-202ENST00000370544 CGAP01215 116 aa16.5■□□□□ 0.23
LMO4-202ENST00000370544 CCL3L1P16619 93 aa16.5■□□□□ 0.23
LMO4-202ENST00000370544 KIAA1644Q3SXP7 199 aa16.5■□□□□ 0.23
LMO4-202ENST00000370544 TCF24Q7RTU0 167 aa16.5■□□□□ 0.23
LMO4-202ENST00000370544 SCN5AQ14524 2016 aa16.5■□□□□ 0.23
LMO4-202ENST00000370544 IGHV1-18A0A0C4DH31 117 aa16.5■□□□□ 0.23
LMO4-202ENST00000370544 VENTXO95231 258 aa16.5■□□□□ 0.23
LMO4-202ENST00000370544 MST1P26927 711 aa16.5■□□□□ 0.23
LMO4-202ENST00000370544 PMCHL1Q16048 86 aa16.5■□□□□ 0.23
LMO4-202ENST00000370544 C17orf82Q86X59 251 aaPredicted RBP16.5■□□□□ 0.23
LMO4-202ENST00000370544 ZNF319Q9P2F9 582 aa16.5■□□□□ 0.23
LMO4-202ENST00000370544 IGHV3-66A0A0C4DH42 116 aa16.49■□□□□ 0.23
LMO4-202ENST00000370544 NBEAP1P0C6P0 100 aa16.49■□□□□ 0.23
LMO4-202ENST00000370544 ZNF497Q6ZNH5 498 aa16.49■□□□□ 0.23
LMO4-202ENST00000370544 CACNA1IQ9P0X4 2223 aa16.49■□□□□ 0.23
LMO4-202ENST00000370544 RP1P56715 2156 aa16.49■□□□□ 0.23
LMO4-202ENST00000370544 H3BVH4 76 aa16.49■□□□□ 0.23
LMO4-202ENST00000370544 LINC00271P0C7V0 271 aa16.49■□□□□ 0.23
LMO4-202ENST00000370544 C18orf12Q96KH6 178 aa16.49■□□□□ 0.23
LMO4-202ENST00000370544 C21orf62Q9NYP8 219 aa16.49■□□□□ 0.23
LMO4-202ENST00000370544 ABCA7Q8IZY2 2146 aa16.49■□□□□ 0.23
LMO4-202ENST00000370544 MBNL2Q5VZF2 373 aaKnown RBP16.49■□□□□ 0.23
LMO4-202ENST00000370544 ZMAT5Q9UDW3 170 aaKnown RBP16.49■□□□□ 0.23
LMO4-202ENST00000370544 GCSHP23434 173 aa16.49■□□□□ 0.23
LMO4-202ENST00000370544 OR10S1Q8NGN2 331 aa16.49■□□□□ 0.23
LMO4-202ENST00000370544 COL25A1Q9BXS0 654 aaPredicted RBP16.49■□□□□ 0.23
LMO4-202ENST00000370544 YPEL1O60688 119 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 TEX45Q8NA69 505 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 YPEL2Q96QA6 119 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 IGKV1D-13A0A0B4J2D9 117 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 IGKV1-13P0DP09 117 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 EFNB1P98172 346 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 FAM159AQ6UWV7 190 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 FGFBP3Q8TAT2 258 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 IGHV3-49A0A0A0MS15 119 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 PF4P02776 101 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 BTCP35070 178 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 GPX4P36969 197 aaPredicted RBP16.48■□□□□ 0.23
LMO4-202ENST00000370544 FAM74A4Q5TZK3 123 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 ZIC4Q8N9L1 334 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 RNASEH2CQ8TDP1 164 aaKnown RBP16.48■□□□□ 0.23
LMO4-202ENST00000370544 RNF222A6NCQ9 220 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 EFNA2O43921 213 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 IGKV3-20P01619 116 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 STAG3L2P0CL84 134 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 SAA1P0DJI8 122 aaPredicted RBP16.48■□□□□ 0.23
LMO4-202ENST00000370544 ZNF56Q15929 161 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 SPACA3Q8IXA5 215 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 RAB37Q96AX2 223 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 A0A0B4J293 547 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 C7orf69Q9H7B7 122 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 CBLN4Q9NTU7 201 aa16.48■□□□□ 0.23
LMO4-202ENST00000370544 TRAV14DV4A0A0A6YYC5 116 aa16.47■□□□□ 0.23
LMO4-202ENST00000370544 TRAV24A0A0B4J272 114 aa16.47■□□□□ 0.23
LMO4-202ENST00000370544 ZNF207O43670 478 aaKnown RBP16.47■□□□□ 0.23
LMO4-202ENST00000370544 A0A0G2JLM5 398 aa16.47■□□□□ 0.23
LMO4-202ENST00000370544 GPR183P32249 361 aa16.47■□□□□ 0.23
LMO4-202ENST00000370544 HBBP68871 147 aa16.47■□□□□ 0.23
LMO4-202ENST00000370544 OR10AG1Q8NH19 301 aa16.47■□□□□ 0.23
LMO4-202ENST00000370544 FAM181BA6NEQ2 426 aa16.47■□□□□ 0.23
LMO4-202ENST00000370544 CRYGSP22914 178 aa16.47■□□□□ 0.23
LMO4-202ENST00000370544 GGNQ86UU5 652 aa16.47■□□□□ 0.23
LMO4-202ENST00000370544 TFF1P04155 84 aa16.46■□□□□ 0.23
LMO4-202ENST00000370544 FAM89BQ8N5H3 189 aa16.46■□□□□ 0.23
LMO4-202ENST00000370544 ZNF525Q8N782 197 aa16.46■□□□□ 0.23
LMO4-202ENST00000370544 CACNG8Q8WXS5 425 aa16.46■□□□□ 0.23
LMO4-202ENST00000370544 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.46■□□□□ 0.23
LMO4-202ENST00000370544 GRIFINA4D1Z8 144 aa16.46■□□□□ 0.23
LMO4-202ENST00000370544 FOLR2P14207 255 aa16.46■□□□□ 0.22
LMO4-202ENST00000370544 TMEM238LA0A1B0GVL6 79 aa16.45■□□□□ 0.22
LMO4-202ENST00000370544 A6NJY4 79 aa16.45■□□□□ 0.22
LMO4-202ENST00000370544 MORN2Q502X0 79 aa16.45■□□□□ 0.22
LMO4-202ENST00000370544 OR52E5Q8NH55 327 aa16.45■□□□□ 0.22
LMO4-202ENST00000370544 UPK2O00526 184 aa16.45■□□□□ 0.22
LMO4-202ENST00000370544 HLA-DRB1P01911 266 aa16.45■□□□□ 0.22
LMO4-202ENST00000370544 ZNF385CQ66K41 422 aaPredicted RBP16.45■□□□□ 0.22
LMO4-202ENST00000370544 WNT10AQ9GZT5 417 aa16.45■□□□□ 0.22
LMO4-202ENST00000370544 PAQR4Q8N4S7 273 aaPredicted RBP16.45■□□□□ 0.22
LMO4-202ENST00000370544 GTF3AQ92664 365 aaKnown RBP16.45■□□□□ 0.22
LMO4-202ENST00000370544 E9PLN8 166 aa16.45■□□□□ 0.22
LMO4-202ENST00000370544 PEX7O00628 323 aa16.45■□□□□ 0.22
LMO4-202ENST00000370544 GFI1Q99684 422 aa16.45■□□□□ 0.22
LMO4-202ENST00000370544 VKORC1Q9BQB6 163 aa16.45■□□□□ 0.22
LMO4-202ENST00000370544 A0A0A6YYD4 124 aa16.44■□□□□ 0.22
LMO4-202ENST00000370544 CLPSP04118 112 aa16.44■□□□□ 0.22
LMO4-202ENST00000370544 CD69Q07108 199 aa16.44■□□□□ 0.22
LMO4-202ENST00000370544 COL5A1-AS1Q5SY13 56 aa16.44■□□□□ 0.22
LMO4-202ENST00000370544 MARVELD3Q96A59 401 aa16.44■□□□□ 0.22
LMO4-202ENST00000370544 SCO2A0A1W2PP80 73 aa16.44■□□□□ 0.22
LMO4-202ENST00000370544 RBFOX2O43251 390 aaKnown RBP eCLIP16.44■□□□□ 0.22
LMO4-202ENST00000370544 CLEC19AQ6UXS0 136 aa16.44■□□□□ 0.22
LMO4-202ENST00000370544 KLK15Q9H2R5 256 aa16.44■□□□□ 0.22
LMO4-202ENST00000370544 NBR2O15453 112 aa16.44■□□□□ 0.22
LMO4-202ENST00000370544 MIR17HGQ75NE6 70 aa16.44■□□□□ 0.22
LMO4-202ENST00000370544 ZCCHC24Q8N2G6 241 aaKnown RBP16.44■□□□□ 0.22
LMO4-202ENST00000370544 OTX1P32242 354 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms