RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 TEX50A0A1B0GTY4 177 aa11.93□□□□□ -0.5
CKS1B-202ENST00000368436 TGOLN2O43493 480 aa11.93□□□□□ -0.5
CKS1B-202ENST00000368436 S1PR2O95136 353 aa11.93□□□□□ -0.5
CKS1B-202ENST00000368436 FCER2P06734 321 aa11.93□□□□□ -0.5
CKS1B-202ENST00000368436 SERPINE2P07093 398 aa11.93□□□□□ -0.5
CKS1B-202ENST00000368436 TRAPPC2P0DI81 140 aa11.93□□□□□ -0.5
CKS1B-202ENST00000368436 TRAPPC2BP0DI82 140 aa11.93□□□□□ -0.5
CKS1B-202ENST00000368436 AADACL3Q5VUY0 350 aa11.93□□□□□ -0.5
CKS1B-202ENST00000368436 DHRS11Q6UWP2 260 aa11.93□□□□□ -0.5
CKS1B-202ENST00000368436 HSD17B13Q7Z5P4 300 aaPredicted RBP11.93□□□□□ -0.5
CKS1B-202ENST00000368436 OR2C3Q8N628 320 aa11.93□□□□□ -0.5
CKS1B-202ENST00000368436 GDPD1Q8N9F7 314 aa11.93□□□□□ -0.5
CKS1B-202ENST00000368436 DMBX1Q8NFW5 382 aa11.93□□□□□ -0.5
CKS1B-202ENST00000368436 OR51H1Q8NH63 302 aa11.93□□□□□ -0.5
CKS1B-202ENST00000368436 TMEM190Q8WZ59 177 aa11.93□□□□□ -0.5
CKS1B-202ENST00000368436 BORCS5Q969J3 196 aa11.93□□□□□ -0.5
CKS1B-202ENST00000368436 Q9H521 79 aa11.93□□□□□ -0.5
CKS1B-202ENST00000368436 CYB5BO43169 146 aa11.92□□□□□ -0.5
CKS1B-202ENST00000368436 WT1-ASQ06250 92 aa11.92□□□□□ -0.5
CKS1B-202ENST00000368436 TMEM17Q86X19 198 aa11.92□□□□□ -0.5
CKS1B-202ENST00000368436 WFDC3Q8IUB2 231 aa11.92□□□□□ -0.5
CKS1B-202ENST00000368436 CADM3Q8N126 398 aa11.92□□□□□ -0.5
CKS1B-202ENST00000368436 ATP6V0BQ99437 205 aa11.92□□□□□ -0.5
CKS1B-202ENST00000368436 SPAG8Q99932 426 aaPredicted RBP11.92□□□□□ -0.5
CKS1B-202ENST00000368436 NDUFA4L2Q9NRX3 87 aa11.92□□□□□ -0.5
CKS1B-202ENST00000368436 TSPAN4O14817 238 aa11.91□□□□□ -0.5
CKS1B-202ENST00000368436 XRCC3O43542 346 aa11.91□□□□□ -0.5
CKS1B-202ENST00000368436 ATP6V1G2O95670 118 aa11.91□□□□□ -0.5
CKS1B-202ENST00000368436 OR13C7P0DN81 318 aa11.91□□□□□ -0.5
CKS1B-202ENST00000368436 RPA2P15927 270 aa11.91□□□□□ -0.5
CKS1B-202ENST00000368436 F2RP25116 425 aa11.91□□□□□ -0.5
CKS1B-202ENST00000368436 MFAP2P55001 183 aa11.91□□□□□ -0.5
CKS1B-202ENST00000368436 HERV-K104P61576 105 aa11.91□□□□□ -0.5
CKS1B-202ENST00000368436 SLC25A24Q6NUK1 477 aa11.91□□□□□ -0.5
CKS1B-202ENST00000368436 Q6ZWC4 215 aa11.91□□□□□ -0.5
CKS1B-202ENST00000368436 SLC38A6Q8IZM9 456 aa11.91□□□□□ -0.5
CKS1B-202ENST00000368436 OR1L8Q8NGR8 309 aa11.91□□□□□ -0.5
CKS1B-202ENST00000368436 BSCL2Q96G97 398 aaPredicted RBP11.91□□□□□ -0.5
CKS1B-202ENST00000368436 ANAPC10Q9UM13 185 aa11.91□□□□□ -0.5
CKS1B-202ENST00000368436 TP53TG1Q9Y2A0 90 aa11.91□□□□□ -0.5
CKS1B-202ENST00000368436 MEIS3P1A6NDR6 274 aa11.9□□□□□ -0.5
CKS1B-202ENST00000368436 OR2T8A6NH00 312 aa11.9□□□□□ -0.5
CKS1B-202ENST00000368436 MARCH11A6NNE9 402 aa11.9□□□□□ -0.5
CKS1B-202ENST00000368436 F8W735 103 aaPredicted RBP11.9□□□□□ -0.5
CKS1B-202ENST00000368436 PGLYRP1O75594 196 aaPredicted RBP11.9□□□□□ -0.5
CKS1B-202ENST00000368436 SPSB3Q6PJ21 355 aa11.9□□□□□ -0.5
CKS1B-202ENST00000368436 MOB3AQ96BX8 217 aa11.9□□□□□ -0.5
CKS1B-202ENST00000368436 S100A16Q96FQ6 103 aaKnown RBP11.9□□□□□ -0.5
CKS1B-202ENST00000368436 DAZ1Q9NQZ3 744 aaKnown RBP11.9□□□□□ -0.5
CKS1B-202ENST00000368436 EHFQ9NZC4 300 aa11.9□□□□□ -0.5
CKS1B-202ENST00000368436 F11RQ9Y624 299 aaKnown RBP11.9□□□□□ -0.5
CKS1B-202ENST00000368436 NDUFA4O00483 81 aa11.89□□□□□ -0.51
CKS1B-202ENST00000368436 NAT1P18440 290 aa11.89□□□□□ -0.51
CKS1B-202ENST00000368436 APOC4P55056 127 aa11.89□□□□□ -0.51
CKS1B-202ENST00000368436 ERVK-16P61578 105 aa11.89□□□□□ -0.51
CKS1B-202ENST00000368436 TNFRSF9Q07011 255 aa11.89□□□□□ -0.51
CKS1B-202ENST00000368436 SCARB1Q8WTV0 552 aa11.89□□□□□ -0.51
CKS1B-202ENST00000368436 FCAMRQ8WWV6 532 aa11.89□□□□□ -0.51
CKS1B-202ENST00000368436 LINC00476Q8WZB0 136 aa11.89□□□□□ -0.51
CKS1B-202ENST00000368436 LSM10Q969L4 123 aaKnown RBP11.89□□□□□ -0.51
CKS1B-202ENST00000368436 ZNF2Q9BSG1 426 aaPredicted RBP11.89□□□□□ -0.51
CKS1B-202ENST00000368436 CHRDL1Q9BU40 450 aa11.89□□□□□ -0.51
CKS1B-202ENST00000368436 IFT46Q9NQC8 304 aa11.89□□□□□ -0.51
CKS1B-202ENST00000368436 A0A0J9YWU9 116 aa11.88□□□□□ -0.51
CKS1B-202ENST00000368436 K7EMT4 169 aa11.88□□□□□ -0.51
CKS1B-202ENST00000368436 UBE2CO00762 179 aa11.88□□□□□ -0.51
CKS1B-202ENST00000368436 SPRY2O43597 315 aa11.88□□□□□ -0.51
CKS1B-202ENST00000368436 RLN1P04808 185 aa11.88□□□□□ -0.51
CKS1B-202ENST00000368436 BMI1P35226 326 aa11.88□□□□□ -0.51
CKS1B-202ENST00000368436 ADMP35318 185 aa11.88□□□□□ -0.51
CKS1B-202ENST00000368436 LPAR6P43657 344 aa11.88□□□□□ -0.51
CKS1B-202ENST00000368436 RFX2P48378 723 aa11.88□□□□□ -0.51
CKS1B-202ENST00000368436 NEDD8Q15843 81 aa11.88□□□□□ -0.51
CKS1B-202ENST00000368436 ODF3L2Q3SX64 289 aa11.88□□□□□ -0.51
CKS1B-202ENST00000368436 LAMTOR1Q6IAA8 161 aa11.88□□□□□ -0.51
CKS1B-202ENST00000368436 CROCCP3Q8IVE0 287 aa11.88□□□□□ -0.51
CKS1B-202ENST00000368436 DGCR14Q96DF8 476 aaKnown RBP11.88□□□□□ -0.51
CKS1B-202ENST00000368436 C21orf62Q9NYP8 219 aa11.88□□□□□ -0.51
CKS1B-202ENST00000368436 UBQLN2Q9UHD9 624 aa11.88□□□□□ -0.51
CKS1B-202ENST00000368436 OR51B2Q9Y5P1 312 aa11.88□□□□□ -0.51
CKS1B-202ENST00000368436 KIR2DL5BA0A0G2JN68 375 aa11.87□□□□□ -0.51
CKS1B-202ENST00000368436 KIR2DL5BA0A0G2JPC4 375 aa11.87□□□□□ -0.51
CKS1B-202ENST00000368436 K7EIM0 57 aa11.87□□□□□ -0.51
CKS1B-202ENST00000368436 SNAPC5O75971 98 aa11.87□□□□□ -0.51
CKS1B-202ENST00000368436 KRASP01116 189 aa11.87□□□□□ -0.51
CKS1B-202ENST00000368436 PMP2P02689 132 aa11.87□□□□□ -0.51
CKS1B-202ENST00000368436 EWSR1Q01844 656 aaKnown RBP eCLIP11.87□□□□□ -0.51
CKS1B-202ENST00000368436 UBE2NLQ5JXB2 153 aa11.87□□□□□ -0.51
CKS1B-202ENST00000368436 LYG2Q86SG7 212 aa11.87□□□□□ -0.51
CKS1B-202ENST00000368436 KIR2DL5AQ8N109 375 aa11.87□□□□□ -0.51
CKS1B-202ENST00000368436 KIR2DL5BQ8NHK3 375 aa11.87□□□□□ -0.51
CKS1B-202ENST00000368436 ZNF414Q96IQ9 312 aa11.87□□□□□ -0.51
CKS1B-202ENST00000368436 HINT2Q9BX68 163 aa11.87□□□□□ -0.51
CKS1B-202ENST00000368436 NSG2Q9Y328 171 aa11.87□□□□□ -0.51
CKS1B-202ENST00000368436 IGHV3-21A0A0B4J1V1 117 aa11.86□□□□□ -0.51
CKS1B-202ENST00000368436 GPR31O00270 319 aa11.86□□□□□ -0.51
CKS1B-202ENST00000368436 ATF4P18848 351 aaPredicted RBP11.86□□□□□ -0.51
CKS1B-202ENST00000368436 G6PCP35575 357 aa11.86□□□□□ -0.51
CKS1B-202ENST00000368436 TGFBR1P36897 503 aa11.86□□□□□ -0.51
CKS1B-202ENST00000368436 TAS2R46P59540 309 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms