RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 MFSD2BA6NFX1 497 aa9.7□□□□□ -0.86
SYNE1-204ENST00000367248 J3QRE1 110 aa9.7□□□□□ -0.86
SYNE1-204ENST00000367248 ZNF253O75346 499 aa9.7□□□□□ -0.86
SYNE1-204ENST00000367248 MEF2BQ02080 365 aaPredicted RBP9.7□□□□□ -0.86
SYNE1-204ENST00000367248 GREB1Q4ZG55 1949 aa9.7□□□□□ -0.86
SYNE1-204ENST00000367248 NMBP08949 121 aa9.7□□□□□ -0.86
SYNE1-204ENST00000367248 GLMPQ8WWB7 406 aa9.7□□□□□ -0.86
SYNE1-204ENST00000367248 LINC00862A6NCI5 91 aa9.69□□□□□ -0.86
SYNE1-204ENST00000367248 SCGB1C2P0DMR2 95 aa9.69□□□□□ -0.86
SYNE1-204ENST00000367248 NUTF2P61970 127 aaKnown RBP9.69□□□□□ -0.86
SYNE1-204ENST00000367248 CD69Q07108 199 aa9.69□□□□□ -0.86
SYNE1-204ENST00000367248 RNF212Q495C1 297 aa9.69□□□□□ -0.86
SYNE1-204ENST00000367248 IL17RELQ6ZVW7 336 aa9.69□□□□□ -0.86
SYNE1-204ENST00000367248 ARPC1AQ92747 370 aa9.69□□□□□ -0.86
SYNE1-204ENST00000367248 FAM74A7A6NL05 159 aa9.69□□□□□ -0.86
SYNE1-204ENST00000367248 SRRM5B3KS81 715 aa9.69□□□□□ -0.86
SYNE1-204ENST00000367248 SAP30O75446 220 aa9.69□□□□□ -0.86
SYNE1-204ENST00000367248 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.69□□□□□ -0.86
SYNE1-204ENST00000367248 ABCA1O95477 2261 aa9.69□□□□□ -0.86
SYNE1-204ENST00000367248 WNK2Q9Y3S1 2297 aa9.69□□□□□ -0.86
SYNE1-204ENST00000367248 PAQR4Q8N4S7 273 aaPredicted RBP9.69□□□□□ -0.86
SYNE1-204ENST00000367248 OR51G1Q8NGK1 321 aa9.69□□□□□ -0.86
SYNE1-204ENST00000367248 ISOC2Q96AB3 205 aa9.69□□□□□ -0.86
SYNE1-204ENST00000367248 BPESC1Q9GZL8 116 aa9.69□□□□□ -0.86
SYNE1-204ENST00000367248 TRAV24A0A0B4J272 114 aa9.69□□□□□ -0.86
SYNE1-204ENST00000367248 ZNF880Q6PDB4 577 aa9.69□□□□□ -0.86
SYNE1-204ENST00000367248 KLHDC1Q8N7A1 406 aa9.69□□□□□ -0.86
SYNE1-204ENST00000367248 NABP2Q9BQ15 211 aa9.69□□□□□ -0.86
SYNE1-204ENST00000367248 HEATR5BQ9P2D3 2071 aa9.69□□□□□ -0.86
SYNE1-204ENST00000367248 CACNA1DQ01668 2161 aa9.69□□□□□ -0.86
SYNE1-204ENST00000367248 ZNF646O15015 1829 aaPredicted RBP9.68□□□□□ -0.86
SYNE1-204ENST00000367248 MSGN1A6NI15 193 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 OR4A47Q6IF82 309 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 DICER1Q9UPY3 1922 aaKnown RBP9.68□□□□□ -0.86
SYNE1-204ENST00000367248 SIGLEC5O15389 551 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 CRISP2P16562 243 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 TMEM133Q9H2Q1 129 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 A0A0G2JLM5 398 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 SELLP14151 372 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 DHRS11Q6UWP2 260 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 CYB561D1Q8N8Q1 229 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 DCAF16Q9NXF7 216 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 MPDZO75970 2070 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 FOXI3A8MTJ6 420 aaPredicted RBP9.68□□□□□ -0.86
SYNE1-204ENST00000367248 IFI27L2Q9H2X8 130 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 PHLDA3Q9Y5J5 127 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 IGKV1-12A0A0C4DH73 117 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 NDUFB4O95168 129 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 IGKV1D-12P01611 117 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 C19orf24Q9BVV8 132 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 PHOX2AO14813 284 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 CD33P20138 364 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 TOMM20LQ6UXN7 152 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 C20orf204Q6ZNR8 217 aa9.68□□□□□ -0.86
SYNE1-204ENST00000367248 YPEL1O60688 119 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 C19orf54Q5BKX5 351 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 YPEL2Q96QA6 119 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 B4DSR2 109 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 CBLN2Q8IUK8 224 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 AP5S1Q9NUS5 200 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 SMUG1Q53HV7 270 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 ELOA3CA0A087WX78 387 aaPredicted RBP9.67□□□□□ -0.86
SYNE1-204ENST00000367248 TMEM189A5PLL7 270 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 Q5BKY6 102 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 MBNL2Q5VZF2 373 aaKnown RBP9.67□□□□□ -0.86
SYNE1-204ENST00000367248 SYT8Q8NBV8 401 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 HSPB7Q9UBY9 170 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 ACAA1P09110 424 aaPredicted RBP9.67□□□□□ -0.86
SYNE1-204ENST00000367248 MAS1LP35410 378 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 CX3CL1P78423 397 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 HIST3H3Q16695 136 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 VMO1Q7Z5L0 202 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 DUX3Q96PT4 197 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 LINC01587Q99440 93 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 A8MWL6 223 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 ZNF329Q86UD4 541 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 OR11H4Q8NGC9 324 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 OR51M1Q9H341 326 aa9.67□□□□□ -0.86
SYNE1-204ENST00000367248 MEOX2P50222 304 aa9.66□□□□□ -0.86
SYNE1-204ENST00000367248 DSCR9P59020 149 aa9.66□□□□□ -0.86
SYNE1-204ENST00000367248 ZNF56Q15929 161 aa9.66□□□□□ -0.86
SYNE1-204ENST00000367248 DTX1Q86Y01 620 aa9.66□□□□□ -0.86
SYNE1-204ENST00000367248 RTBDNQ9BSG5 229 aaPredicted RBP9.66□□□□□ -0.86
SYNE1-204ENST00000367248 SAA2-SAA4A0A096LPE2 208 aa9.66□□□□□ -0.86
SYNE1-204ENST00000367248 PSMB11A5LHX3 300 aa9.66□□□□□ -0.86
SYNE1-204ENST00000367248 CD8AP01732 235 aa9.66□□□□□ -0.86
SYNE1-204ENST00000367248 SAA2P0DJI9 122 aaPredicted RBP9.66□□□□□ -0.86
SYNE1-204ENST00000367248 MFAP2P55001 183 aa9.66□□□□□ -0.86
SYNE1-204ENST00000367248 SNRPEP62304 92 aaKnown RBP9.66□□□□□ -0.86
SYNE1-204ENST00000367248 GTSCR1Q86UQ5 136 aa9.66□□□□□ -0.86
SYNE1-204ENST00000367248 H3BUX3 64 aa9.66□□□□□ -0.86
SYNE1-204ENST00000367248 SIGIRRQ6IA17 410 aa9.66□□□□□ -0.86
SYNE1-204ENST00000367248 ZNF474Q6S9Z5 364 aaPredicted RBP9.66□□□□□ -0.86
SYNE1-204ENST00000367248 KIR3DL3Q8N743 410 aa9.66□□□□□ -0.86
SYNE1-204ENST00000367248 C21orf62Q9NYP8 219 aa9.66□□□□□ -0.86
SYNE1-204ENST00000367248 IGKV1D-13A0A0B4J2D9 117 aa9.66□□□□□ -0.86
SYNE1-204ENST00000367248 IGKV1-13P0DP09 117 aa9.66□□□□□ -0.86
SYNE1-204ENST00000367248 STHQ8IWL8 128 aa9.66□□□□□ -0.86
SYNE1-204ENST00000367248 SPSB4Q96A44 273 aa9.66□□□□□ -0.86
SYNE1-204ENST00000367248 PSMG3Q9BT73 122 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms