RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 CUBNO60494 3623 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 CA2P00918 260 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 GCHFRP30047 84 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 RAB4BP61018 213 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 IQCJQ1A5X6 159 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 Q6ZT83 130 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 OR8I2Q8N0Y5 310 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 FDCSPQ8NFU4 85 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 CMTM2Q8TAZ6 248 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 PIGBOS1A0A0B4J2F0 54 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 IGHV1-18A0A0C4DH31 117 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 TMEM210A6NLX4 147 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 CRYBB3P26998 211 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 HOXC12P31275 282 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 LOXL3P58215 753 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 SSTP61278 116 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 NUTF2P61970 127 aaKnown RBP8.7□□□□□ -1.02
SMC3-201ENST00000361804 GCSAMQ8N6F7 178 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 RND1Q92730 232 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 NOL4LQ96MY1 436 aaPredicted RBP8.7□□□□□ -1.02
SMC3-201ENST00000361804 ZPBPQ9BS86 351 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 LRFN3Q9BTN0 628 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 MRPL18Q9H0U6 180 aaKnown RBP8.7□□□□□ -1.02
SMC3-201ENST00000361804 CLCF1Q9UBD9 225 aa8.7□□□□□ -1.02
SMC3-201ENST00000361804 RIF1Q5UIP0 2472 aaKnown RBP8.7□□□□□ -1.02
SMC3-201ENST00000361804 IGHV2OR16-5A0A0B4J2B6 119 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.69□□□□□ -1.02
SMC3-201ENST00000361804 ZNF124Q15973 351 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 ZNF718Q3SXZ3 478 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 ST6GALNAC3Q8NDV1 305 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 LINC00479Q96M42 142 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 TP53TG5Q9Y2B4 290 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 IGKV1OR2-108A0A075B7D4 117 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 C21orf140B9A014 251 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 TMPRSS2O15393 492 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 IGKV3-15P01624 115 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 OR1L6Q8NGR2 347 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 DIRC2Q96SL1 478 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 S1PR3Q99500 378 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 SAA2-SAA4A0A096LPE2 208 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 FCN1O00602 326 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 HPRT1P00492 218 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 IGKV1-16P04430 117 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 SAA2P0DJI9 122 aaPredicted RBP8.69□□□□□ -1.02
SMC3-201ENST00000361804 TNFSF10P50591 281 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 CT45A1Q5HYN5 189 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 DNLZQ5SXM8 178 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 MORN5Q5VZ52 161 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 FAM90A1Q86YD7 464 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 LYG1Q8N1E2 194 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 CT45A3Q8NHU0 189 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 OR2V2Q96R30 315 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 RYDENQ9NUL5 291 aaKnown RBP8.69□□□□□ -1.02
SMC3-201ENST00000361804 SNURFLB1AK76 121 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 OPRK1P41145 380 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 ERVFC1-1P60608 527 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 PSG5Q15238 335 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 OR4A47Q6IF82 309 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 OR10W1Q8NGF6 305 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 RCHY1Q96PM5 261 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 GCM1Q9NP62 436 aa8.69□□□□□ -1.02
SMC3-201ENST00000361804 ERVK-16P61578 105 aa8.68□□□□□ -1.02
SMC3-201ENST00000361804 LCN2P80188 198 aa8.68□□□□□ -1.02
SMC3-201ENST00000361804 INO80CQ6PI98 192 aaPredicted RBP8.68□□□□□ -1.02
SMC3-201ENST00000361804 PQLC2Q6ZP29 291 aa8.68□□□□□ -1.02
SMC3-201ENST00000361804 ZCCHC24Q8N2G6 241 aaKnown RBP8.68□□□□□ -1.02
SMC3-201ENST00000361804 SGK494Q96LW2 274 aa8.68□□□□□ -1.02
SMC3-201ENST00000361804 NEU1Q99519 415 aa8.68□□□□□ -1.02
SMC3-201ENST00000361804 ZFHX2Q9C0A1 2572 aaPredicted RBP8.68□□□□□ -1.02
SMC3-201ENST00000361804 CXorf1O96002 111 aa8.68□□□□□ -1.02
SMC3-201ENST00000361804 TFPI2P48307 235 aa8.68□□□□□ -1.02
SMC3-201ENST00000361804 MRPL54Q6P161 138 aaKnown RBP8.68□□□□□ -1.02
SMC3-201ENST00000361804 C22orf34Q6ZV56 151 aa8.68□□□□□ -1.02
SMC3-201ENST00000361804 SEM1Q6ZVN7 128 aa8.68□□□□□ -1.02
SMC3-201ENST00000361804 BAGE3Q86Y29 109 aa8.68□□□□□ -1.02
SMC3-201ENST00000361804 BAGE2Q86Y30 109 aa8.68□□□□□ -1.02
SMC3-201ENST00000361804 TRAV5A0A0B4J249 113 aa8.68□□□□□ -1.02
SMC3-201ENST00000361804 IRF2P14316 349 aa8.68□□□□□ -1.02
SMC3-201ENST00000361804 FER1L6-AS2Q96M78 137 aa8.68□□□□□ -1.02
SMC3-201ENST00000361804 SSBP3Q9BWW4 388 aaPredicted RBP8.68□□□□□ -1.02
SMC3-201ENST00000361804 SRRM4A7MD48 611 aaKnown RBP8.67□□□□□ -1.02
SMC3-201ENST00000361804 CRISP2P16562 243 aa8.67□□□□□ -1.02
SMC3-201ENST00000361804 ZNF25P17030 456 aaPredicted RBP8.67□□□□□ -1.02
SMC3-201ENST00000361804 NPY1RP25929 384 aa8.67□□□□□ -1.02
SMC3-201ENST00000361804 SSBP2P81877 361 aaPredicted RBP8.67□□□□□ -1.02
SMC3-201ENST00000361804 FOXL1Q12952 345 aa8.67□□□□□ -1.02
SMC3-201ENST00000361804 CENPWQ5EE01 88 aa8.67□□□□□ -1.02
SMC3-201ENST00000361804 ZCCHC14Q8WYQ9 949 aaKnown RBP8.67□□□□□ -1.02
SMC3-201ENST00000361804 CALYQ9NYX4 217 aa8.67□□□□□ -1.02
SMC3-201ENST00000361804 LSM4Q9Y4Z0 139 aaKnown RBP8.67□□□□□ -1.02
SMC3-201ENST00000361804 M0R1B8 84 aa8.67□□□□□ -1.02
SMC3-201ENST00000361804 MMD2Q8IY49 270 aa8.67□□□□□ -1.02
SMC3-201ENST00000361804 SLC24A4Q8NFF2 622 aa8.67□□□□□ -1.02
SMC3-201ENST00000361804 OR9G1Q8NH87 305 aa8.67□□□□□ -1.02
SMC3-201ENST00000361804 ITLN1Q8WWA0 313 aa8.67□□□□□ -1.02
SMC3-201ENST00000361804 OR7C2O60412 319 aa8.67□□□□□ -1.02
SMC3-201ENST00000361804 CCKARP32238 428 aa8.67□□□□□ -1.02
SMC3-201ENST00000361804 REG1BP48304 166 aa8.67□□□□□ -1.02
SMC3-201ENST00000361804 LGALS4P56470 323 aa8.67□□□□□ -1.02
SMC3-201ENST00000361804 KRTDAPP60985 99 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms