RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 COTL1Q14019 142 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 FAM201AQ5SY85 155 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 NINQ8N4C6 2090 aa9.25□□□□□ -0.93
CLIP1-203ENST00000361654 PSCAO43653 123 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 GGCTO75223 188 aaKnown RBP9.24□□□□□ -0.93
CLIP1-203ENST00000361654 WISP3O95389 354 aaPredicted RBP9.24□□□□□ -0.93
CLIP1-203ENST00000361654 NBEAP1P0C6P0 100 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 OR9G4Q8NGQ1 327 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 WNT10AQ9GZT5 417 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 MSGN1A6NI15 193 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 CRYBB3P26998 211 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 RNASE4P34096 147 aaKnown RBP9.24□□□□□ -0.93
CLIP1-203ENST00000361654 LRTM2Q8N967 370 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 OR4D5Q8NGN0 318 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 CACNG8Q8WXS5 425 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 QSER1Q2KHR3 1735 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 GVINP1Q7Z2Y8 2422 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 TRBV5-7A0A0A0MS05 114 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 TRAV14DV4A0A0A6YYC5 116 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 TMEM42Q69YG0 159 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 KIR3DL3Q8N743 410 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 ST6GALNAC3Q8NDV1 305 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 MRPL20Q9BYC9 149 aaKnown RBP9.24□□□□□ -0.93
CLIP1-203ENST00000361654 NUP214P35658 2090 aaPredicted RBP9.24□□□□□ -0.93
CLIP1-203ENST00000361654 IGHV3-48P01763 117 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 HLA-DRB1P01911 266 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 UMODP07911 640 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 C3orf36Q3SXR2 165 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 THSD7AQ9UPZ6 1657 aa9.24□□□□□ -0.93
CLIP1-203ENST00000361654 TRGV11A0A075B6L2 103 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 TMEM170BQ5T4T1 132 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 ZNF600Q6ZNG1 722 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 TNFRSF14Q92956 283 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 C1QTNF5Q9BXJ0 243 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 PRO1933Q9H354 126 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 IGKV1D-42A0A075B6H8 117 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 HSPB1P04792 205 aaKnown RBP9.23□□□□□ -0.93
CLIP1-203ENST00000361654 ZP1P60852 638 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 WDR82Q6UXN9 313 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 IGLV3-12A0A075B6K2 115 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 GPX4P36969 197 aaPredicted RBP9.23□□□□□ -0.93
CLIP1-203ENST00000361654 CSRP3P50461 194 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 ERVK11-1P61568 191 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 FUT5Q11128 374 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 DTX1Q86Y01 620 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 NXT2Q9NPJ8 142 aaKnown RBP9.23□□□□□ -0.93
CLIP1-203ENST00000361654 S4R3C0 116 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 TRIP12Q14669 1992 aaPredicted RBP9.23□□□□□ -0.93
CLIP1-203ENST00000361654 EIF3GO75821 320 aaKnown RBP eCLIP9.23□□□□□ -0.93
CLIP1-203ENST00000361654 LHX2P50458 406 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 PRSS53Q2L4Q9 553 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 OR5AN1Q8NGI8 311 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 RNF166Q96A37 237 aaPredicted RBP9.23□□□□□ -0.93
CLIP1-203ENST00000361654 TNS1Q9HBL0 1735 aaKnown RBP9.23□□□□□ -0.93
CLIP1-203ENST00000361654 PMCHL1Q16048 86 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 DNLZQ5SXM8 178 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 NCMAPQ5T1S8 102 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 ZNF818PQ6ZRF7 136 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 CYB561D1Q8N8Q1 229 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 BMPERQ8N8U9 685 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 VN1R17PQ8TDU5 208 aa9.23□□□□□ -0.93
CLIP1-203ENST00000361654 AKIRIN1Q9H9L7 192 aaPredicted RBP9.23□□□□□ -0.93
CLIP1-203ENST00000361654 OR11H12B2RN74 326 aa9.22□□□□□ -0.93
CLIP1-203ENST00000361654 RPLP1P05386 114 aaKnown RBP9.22□□□□□ -0.93
CLIP1-203ENST00000361654 P2RY4P51582 365 aa9.22□□□□□ -0.93
CLIP1-203ENST00000361654 OR11H1Q8NG94 326 aa9.22□□□□□ -0.93
CLIP1-203ENST00000361654 OR11H2Q8NH07 326 aa9.22□□□□□ -0.93
CLIP1-203ENST00000361654 RHOGP84095 191 aa9.22□□□□□ -0.93
CLIP1-203ENST00000361654 ZNF415Q09FC8 603 aa9.22□□□□□ -0.93
CLIP1-203ENST00000361654 PVRIGQ6DKI7 326 aa9.22□□□□□ -0.93
CLIP1-203ENST00000361654 ARL6IP6Q8N6S5 226 aa9.22□□□□□ -0.93
CLIP1-203ENST00000361654 PGPEP1Q9NXJ5 209 aa9.22□□□□□ -0.93
CLIP1-203ENST00000361654 GCHFRP30047 84 aa9.22□□□□□ -0.93
CLIP1-203ENST00000361654 C21orf62-AS1Q17RA5 79 aa9.22□□□□□ -0.93
CLIP1-203ENST00000361654 GLRX5Q86SX6 157 aa9.22□□□□□ -0.93
CLIP1-203ENST00000361654 ISOC2Q96AB3 205 aa9.22□□□□□ -0.93
CLIP1-203ENST00000361654 MCM3APO60318 1980 aa9.22□□□□□ -0.93
CLIP1-203ENST00000361654 A0A0G2JMM0 328 aa9.22□□□□□ -0.93
CLIP1-203ENST00000361654 A0A1W2PPB8 328 aa9.22□□□□□ -0.93
CLIP1-203ENST00000361654 A0A1W2PRS3 328 aa9.22□□□□□ -0.93
CLIP1-203ENST00000361654 KIR3DP1A8MWS1 328 aa9.22□□□□□ -0.93
CLIP1-203ENST00000361654 OR9G9P0C7N8 305 aa9.22□□□□□ -0.93
CLIP1-203ENST00000361654 PRADC1Q9BSG0 188 aa9.22□□□□□ -0.93
CLIP1-203ENST00000361654 A0A087WX48 190 aa9.21□□□□□ -0.93
CLIP1-203ENST00000361654 RFLNBQ8N5W9 214 aa9.21□□□□□ -0.93
CLIP1-203ENST00000361654 REPIN1Q9BWE0 567 aaKnown RBP9.21□□□□□ -0.93
CLIP1-203ENST00000361654 OOSP1A8MZH6 123 aa9.21□□□□□ -0.93
CLIP1-203ENST00000361654 NTN3O00634 580 aaPredicted RBP9.21□□□□□ -0.93
CLIP1-203ENST00000361654 HOXA5P20719 270 aa9.21□□□□□ -0.93
CLIP1-203ENST00000361654 ZNF672Q499Z4 452 aaPredicted RBP9.21□□□□□ -0.93
CLIP1-203ENST00000361654 SP5Q6BEB4 398 aaPredicted RBP9.21□□□□□ -0.93
CLIP1-203ENST00000361654 ABLIM2Q6H8Q1 611 aa9.21□□□□□ -0.93
CLIP1-203ENST00000361654 CIARTQ8N365 385 aaPredicted RBP9.21□□□□□ -0.93
CLIP1-203ENST00000361654 ASCL2Q99929 193 aa9.21□□□□□ -0.93
CLIP1-203ENST00000361654 F12P00748 615 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-203ENST00000361654 MRPL13Q9BYD1 178 aaKnown RBP9.21□□□□□ -0.94
CLIP1-203ENST00000361654 PLXNB2O15031 1838 aa9.21□□□□□ -0.94
CLIP1-203ENST00000361654 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.21□□□□□ -0.94
CLIP1-203ENST00000361654 TRAV41A0A0B4J266 112 aa9.21□□□□□ -0.94
CLIP1-203ENST00000361654 C7orf71A4D174 169 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms