RNA–Protein interactions for RNA: ENST00000361391.10

CTNND1-203, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-203ENST00000361391 SNRPD3P62318 126 aaKnown RBP6.81□□□□□ -1.32
CTNND1-203ENST00000361391 SMAGPQ0VAQ4 97 aa6.81□□□□□ -1.32
CTNND1-203ENST00000361391 RCC1LQ96I51 464 aaKnown RBP6.81□□□□□ -1.32
CTNND1-203ENST00000361391 RPRMQ9NS64 109 aa6.81□□□□□ -1.32
CTNND1-203ENST00000361391 MRPL16Q9NX20 251 aaKnown RBP6.81□□□□□ -1.32
CTNND1-203ENST00000361391 CHCHD2Q9Y6H1 151 aaPredicted RBP6.81□□□□□ -1.32
CTNND1-203ENST00000361391 PTPRFP10586 1907 aa6.81□□□□□ -1.32
CTNND1-203ENST00000361391 CCDC88CQ9P219 2028 aa6.81□□□□□ -1.32
CTNND1-203ENST00000361391 CECR9P0C854 216 aa6.81□□□□□ -1.32
CTNND1-203ENST00000361391 SRSF3P84103 164 aaKnown RBP6.81□□□□□ -1.32
CTNND1-203ENST00000361391 FAM71F2Q6NXP2 309 aa6.81□□□□□ -1.32
CTNND1-203ENST00000361391 TCF24Q7RTU0 167 aa6.81□□□□□ -1.32
CTNND1-203ENST00000361391 SAXO1Q8IYX7 474 aa6.81□□□□□ -1.32
CTNND1-203ENST00000361391 LINC00518Q8N0U6 118 aa6.81□□□□□ -1.32
CTNND1-203ENST00000361391 TMEM186Q96B77 213 aa6.81□□□□□ -1.32
CTNND1-203ENST00000361391 BRWD1Q9NSI6 2320 aa6.81□□□□□ -1.32
CTNND1-203ENST00000361391 DICER1Q9UPY3 1922 aaKnown RBP6.81□□□□□ -1.32
CTNND1-203ENST00000361391 RPS20P60866 119 aaKnown RBP6.81□□□□□ -1.32
CTNND1-203ENST00000361391 C1orf174Q8IYL3 243 aa6.81□□□□□ -1.32
CTNND1-203ENST00000361391 PRELID3AQ96N28 172 aa6.81□□□□□ -1.32
CTNND1-203ENST00000361391 KIR2DL4Q99706 377 aa6.81□□□□□ -1.32
CTNND1-203ENST00000361391 RTBDNQ9BSG5 229 aaPredicted RBP6.81□□□□□ -1.32
CTNND1-203ENST00000361391 TMEM70Q9BUB7 260 aa6.81□□□□□ -1.32
CTNND1-203ENST00000361391 SEPSECSQ9HD40 501 aaKnown RBP6.81□□□□□ -1.32
CTNND1-203ENST00000361391 TOMM7Q9P0U1 55 aa6.81□□□□□ -1.32
CTNND1-203ENST00000361391 TYMSP04818 313 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 SMIM13P0DJ93 91 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 CDKN1AP38936 164 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 STARD6P59095 220 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 EFNB1P98172 346 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 CIRBPQ14011 172 aaKnown RBP6.8□□□□□ -1.32
CTNND1-203ENST00000361391 ZNF362Q5T0B9 420 aaPredicted RBP6.8□□□□□ -1.32
CTNND1-203ENST00000361391 ZCCHC24Q8N2G6 241 aaKnown RBP6.8□□□□□ -1.32
CTNND1-203ENST00000361391 ZNF414Q96IQ9 312 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 DUX3Q96PT4 197 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 SSBP4Q9BWG4 385 aaPredicted RBP6.8□□□□□ -1.32
CTNND1-203ENST00000361391 FBXL7Q9UJT9 491 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 FAM90A26D6RGX4 464 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 CGB3P0DN86 165 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 C3orf36Q3SXR2 165 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 ZNF703Q9H7S9 590 aaPredicted RBP6.8□□□□□ -1.32
CTNND1-203ENST00000361391 TMEM106BQ9NUM4 274 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 LURAP1LQ8IV03 231 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 FAM181AQ8N9Y4 354 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 SFXN3Q9BWM7 321 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 LNP1A1A4G5 178 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 DPRXA6NFQ7 191 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 PEX7O00628 323 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 TBX6O95947 436 aaPredicted RBP6.8□□□□□ -1.32
CTNND1-203ENST00000361391 MRPL32Q9BYC8 188 aaKnown RBP6.8□□□□□ -1.32
CTNND1-203ENST00000361391 SCN8AQ9UQD0 1980 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 CGB7P0DN87 165 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 REC114Q7Z4M0 266 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 GATAD1Q8WUU5 269 aa6.8□□□□□ -1.32
CTNND1-203ENST00000361391 RNASE7Q9H1E1 156 aaKnown RBP6.8□□□□□ -1.32
CTNND1-203ENST00000361391 SOX21Q9Y651 276 aaPredicted RBP6.8□□□□□ -1.32
CTNND1-203ENST00000361391 HOXA3O43365 443 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-203ENST00000361391 SRD5A1P18405 259 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 SPAG8Q99932 426 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-203ENST00000361391 SAA1P0DJI8 122 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-203ENST00000361391 JOSD1Q15040 202 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-203ENST00000361391 ATRAIDQ6UW56 229 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 OR4X2Q8NGF9 303 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 IFI27L2Q9H2X8 130 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 PLSCR2Q9NRY7 297 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 CKAP5Q14008 2032 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 TRAV12-3A0A0B4J271 114 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 LYNX1G3V0Z9 82 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 CD55P08174 381 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 LYNX1P0DP58 116 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 CCL3L1P16619 93 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 IGHV1-2P23083 117 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 Q6ZT83 130 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 TMEM183AQ8IXX5 376 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 NUDT11Q96G61 164 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 NDUFA2O43678 99 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 APOMO95445 188 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 NBEAP1P0C6P0 100 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 CLDND2Q8NHS1 167 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 MESP1Q9BRJ9 268 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 TNFRSF18Q9Y5U5 241 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 RAMP3O60896 148 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 PPIFP30405 207 aaKnown RBP6.79□□□□□ -1.32
CTNND1-203ENST00000361391 ASIPP42127 132 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 C10orf128Q5T292 105 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 DMRTA1Q5VZB9 504 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 SCGB3A1Q96QR1 104 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 AICDAQ9GZX7 198 aa6.79□□□□□ -1.32
CTNND1-203ENST00000361391 F5P12259 2224 aa6.78□□□□□ -1.32
CTNND1-203ENST00000361391 APOBEC3AP31941 199 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-203ENST00000361391 TMEM95Q3KNT9 176 aa6.78□□□□□ -1.32
CTNND1-203ENST00000361391 PPP1R27Q86WC6 154 aa6.78□□□□□ -1.32
CTNND1-203ENST00000361391 PLPPR1Q8TBJ4 325 aa6.78□□□□□ -1.32
CTNND1-203ENST00000361391 IL36BQ9NZH7 164 aa6.78□□□□□ -1.32
CTNND1-203ENST00000361391 A0A1B0GV72 72 aa6.78□□□□□ -1.32
CTNND1-203ENST00000361391 TSPOP30536 169 aa6.78□□□□□ -1.32
CTNND1-203ENST00000361391 SRSF7Q16629 238 aaKnown RBP eCLIP6.78□□□□□ -1.321e-6■■□□□ 13.9
CTNND1-203ENST00000361391 TBR1Q16650 682 aa6.78□□□□□ -1.32
CTNND1-203ENST00000361391 GTSCR1Q86UQ5 136 aa6.78□□□□□ -1.32
CTNND1-203ENST00000361391 MRAPQ8TCY5 172 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms