RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 C2orf68Q2NKX9 166 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 TPTE2P1Q5T6R2 138 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 C1QL3Q5VWW1 255 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 SELENOHQ8IZQ5 122 aaKnown RBP11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 A0A1W2PP11 408 aa11.33□□□□□ -0.6
SRGAP3-201ENST00000360413 SRSF6Q13247 344 aaKnown RBP11.33□□□□□ -0.6
SRGAP3-201ENST00000360413 RNF182Q8N6D2 247 aa11.33□□□□□ -0.6
SRGAP3-201ENST00000360413 ESDP10768 282 aa11.33□□□□□ -0.6
SRGAP3-201ENST00000360413 OR4X2Q8NGF9 303 aa11.33□□□□□ -0.6
SRGAP3-201ENST00000360413 DUSP15Q9H1R2 295 aaPredicted RBP11.33□□□□□ -0.6
SRGAP3-201ENST00000360413 SIRT4Q9Y6E7 314 aaPredicted RBP11.33□□□□□ -0.6
SRGAP3-201ENST00000360413 TMEM229AB2RXF0 380 aa11.33□□□□□ -0.6
SRGAP3-201ENST00000360413 SERF1AO75920 110 aa11.33□□□□□ -0.6
SRGAP3-201ENST00000360413 UCP2P55851 309 aa11.33□□□□□ -0.6
SRGAP3-201ENST00000360413 A8MWV9 139 aa11.33□□□□□ -0.6
SRGAP3-201ENST00000360413 CT62P0C5K7 136 aa11.33□□□□□ -0.6
SRGAP3-201ENST00000360413 AQP3Q92482 292 aa11.33□□□□□ -0.6
SRGAP3-201ENST00000360413 NPIPB11E5RHQ5 1161 aa11.33□□□□□ -0.6
SRGAP3-201ENST00000360413 ADRA2AP08913 450 aa11.33□□□□□ -0.6
SRGAP3-201ENST00000360413 FAM27BQ5VT28 67 aa11.33□□□□□ -0.6
SRGAP3-201ENST00000360413 A0A1W2PPE3 182 aa11.33□□□□□ -0.6
SRGAP3-201ENST00000360413 ATXN7O15265 892 aaPredicted RBP11.33□□□□□ -0.6
SRGAP3-201ENST00000360413 SCGB3A1Q96QR1 104 aa11.33□□□□□ -0.6
SRGAP3-201ENST00000360413 THY1P04216 161 aa11.32□□□□□ -0.6
SRGAP3-201ENST00000360413 R4GN57 208 aa11.32□□□□□ -0.6
SRGAP3-201ENST00000360413 B9A039 149 aa11.32□□□□□ -0.6
SRGAP3-201ENST00000360413 SCTP09683 121 aa11.32□□□□□ -0.6
SRGAP3-201ENST00000360413 TDGF1P13385 188 aa11.32□□□□□ -0.6
SRGAP3-201ENST00000360413 TMEM155Q4W5P6 130 aa11.32□□□□□ -0.6
SRGAP3-201ENST00000360413 MGST2Q99735 147 aa11.32□□□□□ -0.6
SRGAP3-201ENST00000360413 LOC105371242A0A075B767 164 aa11.32□□□□□ -0.6
SRGAP3-201ENST00000360413 DCAF10Q5QP82 559 aa11.32□□□□□ -0.6
SRGAP3-201ENST00000360413 VKORC1L1Q8N0U8 176 aa11.32□□□□□ -0.6
SRGAP3-201ENST00000360413 MARF1Q9Y4F3 1742 aaKnown RBP11.32□□□□□ -0.6
SRGAP3-201ENST00000360413 CD8AP01732 235 aa11.32□□□□□ -0.6
SRGAP3-201ENST00000360413 ZNF585BQ52M93 769 aa11.32□□□□□ -0.6
SRGAP3-201ENST00000360413 PSMB11A5LHX3 300 aa11.32□□□□□ -0.6
SRGAP3-201ENST00000360413 DLEU1O43261 78 aa11.32□□□□□ -0.6
SRGAP3-201ENST00000360413 RAMP1O60894 148 aa11.32□□□□□ -0.6
SRGAP3-201ENST00000360413 FAM214BQ7L5A3 538 aa11.32□□□□□ -0.6
SRGAP3-201ENST00000360413 KLHDC2Q9Y2U9 406 aa11.32□□□□□ -0.6
SRGAP3-201ENST00000360413 GOLT1AQ6ZVE7 132 aa11.32□□□□□ -0.6
SRGAP3-201ENST00000360413 TRAV8-1A0A0A6YYK1 113 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 ZNF562Q6V9R5 426 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 FGFRL1Q8N441 504 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 RFLNBQ8N5W9 214 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 COL22A1Q8NFW1 1626 aaPredicted RBP11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 TM4SF5O14894 197 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 MS4A6AQ9H2W1 248 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 NPDC1Q9NQX5 325 aaPredicted RBP11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 KIAA1551Q9HCM1 1747 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 IGHV1OR15-9A0A0B4J2B8 117 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 CD5P06127 495 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 TBR1Q16650 682 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 HCP5Q6MZN7 132 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 RSPO3Q9BXY4 272 aaPredicted RBP11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 UNC119Q13432 240 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 OR9G1Q8NH87 305 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 FMC1Q96HJ9 113 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 SLC25A2Q9BXI2 301 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 TRAV9-2A0A087WT02 112 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 SPSB2Q99619 263 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 MED13LQ71F56 2210 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 GGTLC3B5MD39 225 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 LHFPL4Q7Z7J7 247 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 ZNF488Q96MN9 340 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 TMEM106BQ9NUM4 274 aa11.31□□□□□ -0.6
SRGAP3-201ENST00000360413 TRAV9-1A0A075B6T8 112 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 PGLYRP1O75594 196 aaPredicted RBP11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 NGFRP08138 427 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 ORAOV1Q8WV07 137 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 TAF1LQ8IZX4 1826 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 ODAMA1E959 279 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 LILRA1O75019 489 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 COX5BP10606 129 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 SLC25A53Q5H9E4 307 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 C16orf47Q6ZP98 133 aaPredicted RBP11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 NPIPB4C9JG80 1138 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 HIST1H2BKO60814 126 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 HIST1H2BJP06899 126 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 FSTP19883 344 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 HIST1H2BOP23527 126 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 HIST1H2BBP33778 126 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 HIST1H2BDP58876 126 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 HIST1H2BCP62807 126 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 HIST2H2BEQ16778 126 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 RNASEH2CQ8TDP1 164 aaKnown RBP11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 HIST1H2BHQ93079 126 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 HIST1H2BNQ99877 126 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 HIST1H2BMQ99879 126 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 SEMA5BQ9P283 1151 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 LOC102723996A0A087X1L8 192 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 MARCH11A6NNE9 402 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 GCHFRP30047 84 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 SEC11AP67812 179 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 TMEM74BQ9NUR3 256 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 ADMP35318 185 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 LINC01555Q8NAE3 123 aa11.3□□□□□ -0.6
SRGAP3-201ENST00000360413 TRPM3Q9HCF6 1732 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms