RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 VN1R4Q7Z5H5 301 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 DNAJC13O75165 2243 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 IGHV1-45A0A0A0MS14 117 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 ZFPL1O95159 310 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 ESDP10768 282 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 SLC25A1P53007 311 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 ZNF124Q15973 351 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 HOGA1Q86XE5 327 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 RFLNBQ8N5W9 214 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 KLHL30-AS1Q8NEE0 82 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 FAM57AQ8TBR7 257 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 TDRD15B5MCY1 1934 aaKnown RBP8.31□□□□□ -1.08
CHD3-202ENST00000358181 HOXD4P09016 255 aaPredicted RBP8.31□□□□□ -1.08
CHD3-202ENST00000358181 BAALCQ8WXS3 180 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 CDC42EP2O14613 210 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 HOXA6P31267 233 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 OR9G1Q8NH87 305 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 NEU4Q8WWR8 484 aaPredicted RBP8.3□□□□□ -1.08
CHD3-202ENST00000358181 ABHD17AQ96GS6 310 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 C19orf24Q9BVV8 132 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 COL11A1P12107 1806 aaPredicted RBP8.3□□□□□ -1.08
CHD3-202ENST00000358181 LYNX1G3V0Z9 82 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 LYNX1P0DP58 116 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 FAM181AQ8N9Y4 354 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 SMIM4Q8WVI0 70 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 VKORC1Q9BQB6 163 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 PAX1P15863 534 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 COX19Q49B96 90 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 SMRP1Q8NCR6 262 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 ZNRF1Q8ND25 227 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 ABHD1Q96SE0 405 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 KCNK7Q9Y2U2 307 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 ITGB1BP1O14713 200 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 FAM74A3Q4VXF1 159 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 TAF15Q92804 592 aaKnown RBP eCLIP8.3□□□□□ -1.08
CHD3-202ENST00000358181 SIGLEC7Q9Y286 467 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 PSG4Q00888 419 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 UNC119Q13432 240 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 DTX4Q9Y2E6 619 aa8.3□□□□□ -1.08
CHD3-202ENST00000358181 KCNE1BA0A087WTH5 132 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 TRAV41A0A0B4J266 112 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 M0R2P5 195 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 ZG16O60844 167 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 PKIAP61925 76 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 FOXJ2Q9P0K8 574 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 HLA-DQA1P01909 254 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 GLIPR1P48060 266 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 C6orf226Q5I0X4 101 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 FAM166AQ6J272 317 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 TMEM45BQ96B21 275 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 WDR34Q96EX3 536 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 BCL2L10Q9HD36 194 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 ATAD5Q96QE3 1844 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 E9PQ18 207 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 TNFRSF9Q07011 255 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 TPTE2P1Q5T6R2 138 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 MYOFQ9NZM1 2061 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 NDUFA2O43678 99 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 CRYBB2P43320 205 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 ZIC1Q15915 447 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 C17orf47Q8NEP4 570 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 MARS2Q96GW9 593 aaKnown RBP8.29□□□□□ -1.08
CHD3-202ENST00000358181 TMEFF2Q9UIK5 374 aaPredicted RBP8.29□□□□□ -1.08
CHD3-202ENST00000358181 RGPD4Q7Z3J3 1758 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 TRAV14DV4A0A0A6YYC5 116 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 EFEMP2O95967 443 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 CD160O95971 181 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 GNLYP22749 145 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 TMEM52Q8NDY8 209 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 TMEM54Q969K7 222 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 KNTC1P50748 2209 aa8.29□□□□□ -1.08
CHD3-202ENST00000358181 C19orf67A6NJJ6 358 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 MYOD1P15172 320 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 ZNF474Q6S9Z5 364 aaPredicted RBP8.28□□□□□ -1.08
CHD3-202ENST00000358181 DRAM1Q8N682 238 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 OR11H7Q8NGC8 314 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 G6PC2Q9NQR9 355 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 IFNL4K9M1U5 179 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 PMCHL1Q16048 86 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 NEU3Q9UQ49 428 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 A0A1B0GV90 55 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 LOC105371267A0A1B0GV96 52 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 CCL1P22362 96 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 CYB561D1Q8N8Q1 229 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 KLF14Q8TD94 323 aaPredicted RBP8.28□□□□□ -1.08
CHD3-202ENST00000358181 ANAPC13Q9BS18 74 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 FXYD1O00168 92 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 ATP6V0CP27449 155 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 PEBP1P30086 187 aaKnown RBP8.28□□□□□ -1.08
CHD3-202ENST00000358181 CEACAM21Q3KPI0 293 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 NABP2Q9BQ15 211 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 SNRNP200O75643 2136 aaKnown RBP8.28□□□□□ -1.08
CHD3-202ENST00000358181 UNC13CQ8NB66 2214 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 TRGC2P03986 189 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 TIMM17AQ99595 171 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 LOC101059948A0A1B0GTJ6 334 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.28□□□□□ -1.08
CHD3-202ENST00000358181 CTSBP07858 339 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 EGR4Q05215 589 aa8.28□□□□□ -1.08
CHD3-202ENST00000358181 ARAP2Q8WZ64 1704 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms