RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 UBQLN2Q9UHD9 624 aa13.64□□□□□ -0.23
TPM1-205ENST00000357980 ZNF469Q96JG9 3925 aaPredicted RBP13.63□□□□□ -0.23
TPM1-205ENST00000357980 A0A1B0GW64 132 aa13.63□□□□□ -0.23
TPM1-205ENST00000357980 NBR2O15453 112 aa13.63□□□□□ -0.23
TPM1-205ENST00000357980 HES1Q14469 280 aa13.63□□□□□ -0.23
TPM1-205ENST00000357980 C10orf55Q5SWW7 151 aa13.63□□□□□ -0.23
TPM1-205ENST00000357980 OR1S2Q8NGQ3 325 aa13.63□□□□□ -0.23
TPM1-205ENST00000357980 TMEM170AQ8WVE7 144 aa13.63□□□□□ -0.23
TPM1-205ENST00000357980 HINT2Q9BX68 163 aa13.63□□□□□ -0.23
TPM1-205ENST00000357980 ARV1Q9H2C2 271 aa13.63□□□□□ -0.23
TPM1-205ENST00000357980 PLEKHA3Q9HB20 300 aa13.63□□□□□ -0.23
TPM1-205ENST00000357980 INS-IGF2F8WCM5 200 aa13.62□□□□□ -0.23
TPM1-205ENST00000357980 MAS1LP35410 378 aa13.62□□□□□ -0.23
TPM1-205ENST00000357980 SSBP2P81877 361 aaPredicted RBP13.62□□□□□ -0.23
TPM1-205ENST00000357980 SCARB1Q8WTV0 552 aa13.62□□□□□ -0.23
TPM1-205ENST00000357980 PAIP2BQ9ULR5 123 aaKnown RBP13.62□□□□□ -0.23
TPM1-205ENST00000357980 ABCA1O95477 2261 aa13.62□□□□□ -0.23
TPM1-205ENST00000357980 NAV3Q8IVL0 2385 aa13.62□□□□□ -0.23
TPM1-205ENST00000357980 TEX15Q9BXT5 2789 aa13.62□□□□□ -0.23
TPM1-205ENST00000357980 A0A0U1RQK1 487 aa13.62□□□□□ -0.23
TPM1-205ENST00000357980 BRS3P32247 399 aa13.62□□□□□ -0.23
TPM1-205ENST00000357980 EIF5AP63241 154 aaKnown RBP13.62□□□□□ -0.23
TPM1-205ENST00000357980 HBG1P69891 147 aa13.62□□□□□ -0.23
TPM1-205ENST00000357980 HBG2P69892 147 aa13.62□□□□□ -0.23
TPM1-205ENST00000357980 FAM120AOSQ5T036 256 aa13.62□□□□□ -0.23
TPM1-205ENST00000357980 OR10W1Q8NGF6 305 aa13.62□□□□□ -0.23
TPM1-205ENST00000357980 ATP5SQ99766 215 aa13.62□□□□□ -0.23
TPM1-205ENST00000357980 ENY2Q9NPA8 101 aa13.62□□□□□ -0.23
TPM1-205ENST00000357980 ITGB1BP2Q9UKP3 347 aa13.62□□□□□ -0.23
TPM1-205ENST00000357980 BORCS7-ASMTA0A0B4J1R7 106 aa13.61□□□□□ -0.23
TPM1-205ENST00000357980 IFNA10P01566 189 aa13.61□□□□□ -0.23
TPM1-205ENST00000357980 FAM106CPP0CH98 169 aa13.61□□□□□ -0.23
TPM1-205ENST00000357980 COMPP49747 757 aaPredicted RBP13.61□□□□□ -0.23
TPM1-205ENST00000357980 RPP30P78346 268 aaKnown RBP13.61□□□□□ -0.23
TPM1-205ENST00000357980 ZNF266Q14584 549 aa13.61□□□□□ -0.23
TPM1-205ENST00000357980 BSXQ3C1V8 233 aa13.61□□□□□ -0.23
TPM1-205ENST00000357980 OR8G2PQ6IF36 304 aa13.61□□□□□ -0.23
TPM1-205ENST00000357980 MEGF9Q9H1U4 602 aa13.61□□□□□ -0.23
TPM1-205ENST00000357980 CSPG4Q6UVK1 2322 aa13.6□□□□□ -0.23
TPM1-205ENST00000357980 FCN1O00602 326 aa13.6□□□□□ -0.23
TPM1-205ENST00000357980 TMEM11P17152 192 aa13.6□□□□□ -0.23
TPM1-205ENST00000357980 SLC38A11Q08AI6 406 aa13.6□□□□□ -0.23
TPM1-205ENST00000357980 C5orf64Q2M2E5 130 aa13.6□□□□□ -0.23
TPM1-205ENST00000357980 CIARTQ8N365 385 aaPredicted RBP13.6□□□□□ -0.23
TPM1-205ENST00000357980 SLC24A4Q8NFF2 622 aa13.6□□□□□ -0.23
TPM1-205ENST00000357980 KIAA1456Q9P272 454 aa13.6□□□□□ -0.23
TPM1-205ENST00000357980 FLNAP21333 2647 aaKnown RBP13.6□□□□□ -0.23
TPM1-205ENST00000357980 PRSS46E5RG02 174 aa13.6□□□□□ -0.23
TPM1-205ENST00000357980 DFFBO76075 338 aa13.6□□□□□ -0.23
TPM1-205ENST00000357980 PLGLAQ15195 96 aa13.6□□□□□ -0.23
TPM1-205ENST00000357980 TNXAQ16473 311 aa13.6□□□□□ -0.23
TPM1-205ENST00000357980 TMED6Q8WW62 240 aa13.6□□□□□ -0.23
TPM1-205ENST00000357980 GINS3Q9BRX5 216 aa13.6□□□□□ -0.23
TPM1-205ENST00000357980 ZFHX3Q15911 3703 aa13.59□□□□□ -0.23
TPM1-205ENST00000357980 A0A1W2PN81 502 aa13.59□□□□□ -0.23
TPM1-205ENST00000357980 RPS10-NUDT3A0A1W2PQS6 291 aa13.59□□□□□ -0.23
TPM1-205ENST00000357980 ACTL6BO94805 426 aa13.59□□□□□ -0.23
TPM1-205ENST00000357980 SCAF4O95104 1147 aaKnown RBP13.59□□□□□ -0.23
TPM1-205ENST00000357980 NPY1RP25929 384 aa13.59□□□□□ -0.23
TPM1-205ENST00000357980 CHRNA7P36544 502 aa13.59□□□□□ -0.23
TPM1-205ENST00000357980 HTR2BP41595 481 aa13.59□□□□□ -0.23
TPM1-205ENST00000357980 RPL27AP46776 148 aaKnown RBP13.59□□□□□ -0.23
TPM1-205ENST00000357980 WT1-ASQ06250 92 aa13.59□□□□□ -0.23
TPM1-205ENST00000357980 CYB5R2Q6BCY4 276 aa13.59□□□□□ -0.23
TPM1-205ENST00000357980 LILRB2Q8N423 598 aa13.59□□□□□ -0.23
TPM1-205ENST00000357980 OR10P1Q8NGE3 313 aa13.59□□□□□ -0.23
TPM1-205ENST00000357980 SOX21Q9Y651 276 aaPredicted RBP13.59□□□□□ -0.23
TPM1-205ENST00000357980 AKAP9Q99996 3911 aa13.59□□□□□ -0.23
TPM1-205ENST00000357980 IGLC7A0M8Q6 106 aa13.58□□□□□ -0.24
TPM1-205ENST00000357980 CA2P00918 260 aa13.58□□□□□ -0.24
TPM1-205ENST00000357980 FSHBP01225 129 aa13.58□□□□□ -0.24
TPM1-205ENST00000357980 OR8U8P0C7N1 319 aa13.58□□□□□ -0.24
TPM1-205ENST00000357980 FAM74A1Q5RGS3 127 aa13.58□□□□□ -0.24
TPM1-205ENST00000357980 PIFOQ8TCI5 191 aa13.58□□□□□ -0.24
TPM1-205ENST00000357980 PINX1Q96BK5 328 aaKnown RBP13.58□□□□□ -0.24
TPM1-205ENST00000357980 RNASE2P10153 161 aaKnown RBP13.57□□□□□ -0.24
TPM1-205ENST00000357980 ATP5IP56385 69 aaPredicted RBP13.57□□□□□ -0.24
TPM1-205ENST00000357980 VWC2Q2TAL6 325 aa13.57□□□□□ -0.24
TPM1-205ENST00000357980 TEX22C9J3V5 150 aa13.57□□□□□ -0.24
TPM1-205ENST00000357980 SPP1P10451 314 aa13.57□□□□□ -0.24
TPM1-205ENST00000357980 BPIFB3P59826 476 aa13.57□□□□□ -0.24
TPM1-205ENST00000357980 RAB11AP62491 216 aa13.57□□□□□ -0.24
TPM1-205ENST00000357980 GNB1P62873 340 aa13.57□□□□□ -0.24
TPM1-205ENST00000357980 ATP6V1FQ16864 119 aa13.57□□□□□ -0.24
TPM1-205ENST00000357980 C2orf83Q53S99 150 aa13.57□□□□□ -0.24
TPM1-205ENST00000357980 ETV3LQ6ZN32 361 aa13.57□□□□□ -0.24
TPM1-205ENST00000357980 Q8N9W7 124 aa13.57□□□□□ -0.24
TPM1-205ENST00000357980 HSD17B11Q8NBQ5 300 aa13.57□□□□□ -0.24
TPM1-205ENST00000357980 SRSF12Q8WXF0 261 aaKnown RBP13.57□□□□□ -0.24
TPM1-205ENST00000357980 FAM96BQ9Y3D0 163 aa13.57□□□□□ -0.24
TPM1-205ENST00000357980 NCBP2LA6PVI3 153 aaKnown RBP13.56□□□□□ -0.24
TPM1-205ENST00000357980 FBXO24O75426 580 aa13.56□□□□□ -0.24
TPM1-205ENST00000357980 FBP1P09467 338 aa13.56□□□□□ -0.24
TPM1-205ENST00000357980 ERHP84090 104 aaKnown RBP13.56□□□□□ -0.24
TPM1-205ENST00000357980 CLLU1Q5K131 121 aa13.56□□□□□ -0.24
TPM1-205ENST00000357980 EIF5AL1Q6IS14 154 aaKnown RBP13.56□□□□□ -0.24
TPM1-205ENST00000357980 TMEM147Q9BVK8 224 aa13.56□□□□□ -0.24
TPM1-205ENST00000357980 PARD6GQ9BYG4 376 aaPredicted RBP13.56□□□□□ -0.24
TPM1-205ENST00000357980 SH3BGRL3Q9H299 93 aa13.56□□□□□ -0.24
TPM1-205ENST00000357980 C1RLQ9NZP8 487 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms