RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 MAGT1Q9H0U3 335 aa19.96■□□□□ 0.79
SSBP3-202ENST00000357475 FBN1P35555 2871 aaKnown RBP19.96■□□□□ 0.79
SSBP3-202ENST00000357475 NDUFA7O95182 113 aa19.95■□□□□ 0.78
SSBP3-202ENST00000357475 IGF1P05019 195 aa19.95■□□□□ 0.78
SSBP3-202ENST00000357475 VDAC2P45880 294 aaPredicted RBP19.95■□□□□ 0.78
SSBP3-202ENST00000357475 PRCDQ00LT1 54 aa19.95■□□□□ 0.78
SSBP3-202ENST00000357475 TNFRSF9Q07011 255 aa19.95■□□□□ 0.78
SSBP3-202ENST00000357475 KRTAP24-1Q3LI83 254 aa19.95■□□□□ 0.78
SSBP3-202ENST00000357475 C10orf99Q6UWK7 81 aa19.95■□□□□ 0.78
SSBP3-202ENST00000357475 OR2T6Q8NHC8 308 aa19.95■□□□□ 0.78
SSBP3-202ENST00000357475 LINC01006Q8NI28 216 aa19.95■□□□□ 0.78
SSBP3-202ENST00000357475 C16orf95Q9H693 158 aa19.95■□□□□ 0.78
SSBP3-202ENST00000357475 HSPB7Q9UBY9 170 aa19.95■□□□□ 0.78
SSBP3-202ENST00000357475 IGLC7A0M8Q6 106 aa19.94■□□□□ 0.78
SSBP3-202ENST00000357475 REG1AP05451 166 aa19.94■□□□□ 0.78
SSBP3-202ENST00000357475 TRAPPC2P0DI81 140 aa19.94■□□□□ 0.78
SSBP3-202ENST00000357475 TRAPPC2BP0DI82 140 aa19.94■□□□□ 0.78
SSBP3-202ENST00000357475 C19orf54Q5BKX5 351 aa19.94■□□□□ 0.78
SSBP3-202ENST00000357475 STPG2Q8N412 459 aa19.94■□□□□ 0.78
SSBP3-202ENST00000357475 AP4M1O00189 453 aa19.93■□□□□ 0.78
SSBP3-202ENST00000357475 SCGB1D2O95969 90 aa19.93■□□□□ 0.78
SSBP3-202ENST00000357475 HKR1P10072 659 aa19.93■□□□□ 0.78
SSBP3-202ENST00000357475 MDKP21741 143 aaPredicted RBP19.93■□□□□ 0.78
SSBP3-202ENST00000357475 WT1-ASQ06250 92 aa19.93■□□□□ 0.78
SSBP3-202ENST00000357475 IL15RAQ13261 267 aa19.93■□□□□ 0.78
SSBP3-202ENST00000357475 CHAC2Q8WUX2 184 aa19.93■□□□□ 0.78
SSBP3-202ENST00000357475 PDCD10Q9BUL8 212 aa19.93■□□□□ 0.78
SSBP3-202ENST00000357475 RBKSQ9H477 322 aa19.93■□□□□ 0.78
SSBP3-202ENST00000357475 ATRQ13535 2644 aa19.93■□□□□ 0.78
SSBP3-202ENST00000357475 TRAV41A0A0B4J266 112 aa19.92■□□□□ 0.78
SSBP3-202ENST00000357475 CRIP2P52943 208 aaPredicted RBP19.92■□□□□ 0.78
SSBP3-202ENST00000357475 SPCS3P61009 180 aa19.92■□□□□ 0.78
SSBP3-202ENST00000357475 PDLIM3Q53GG5 364 aaPredicted RBP19.92■□□□□ 0.78
SSBP3-202ENST00000357475 UNQ5815/PRO19632Q6UWF5 114 aa19.92■□□□□ 0.78
SSBP3-202ENST00000357475 OR52E5Q8NH55 327 aa19.92■□□□□ 0.78
SSBP3-202ENST00000357475 MBPP02686 304 aaPredicted RBP19.92■□□□□ 0.78
SSBP3-202ENST00000357475 POLR2GP62487 172 aaKnown RBP eCLIP19.92■□□□□ 0.78
SSBP3-202ENST00000357475 ID3Q02535 119 aa19.92■□□□□ 0.78
SSBP3-202ENST00000357475 ZNF329Q86UD4 541 aa19.92■□□□□ 0.78
SSBP3-202ENST00000357475 SOX15O60248 233 aa19.91■□□□□ 0.78
SSBP3-202ENST00000357475 NKX2-1P43699 371 aaPredicted RBP19.91■□□□□ 0.78
SSBP3-202ENST00000357475 OR5T1Q8NG75 326 aa19.91■□□□□ 0.78
SSBP3-202ENST00000357475 CEBPZOSA8MTT3 80 aa19.9■□□□□ 0.78
SSBP3-202ENST00000357475 HOXA1P49639 335 aaPredicted RBP19.9■□□□□ 0.78
SSBP3-202ENST00000357475 CFHR3Q02985 330 aa19.9■□□□□ 0.78
SSBP3-202ENST00000357475 WNT10AQ9GZT5 417 aa19.9■□□□□ 0.78
SSBP3-202ENST00000357475 PLEKHA3Q9HB20 300 aa19.9■□□□□ 0.78
SSBP3-202ENST00000357475 A0A1W2PN81 502 aa19.89■□□□□ 0.77
SSBP3-202ENST00000357475 OR13C7P0DN81 318 aa19.89■□□□□ 0.77
SSBP3-202ENST00000357475 IAPPP10997 89 aa19.89■□□□□ 0.77
SSBP3-202ENST00000357475 PPIFP30405 207 aaKnown RBP19.89■□□□□ 0.77
SSBP3-202ENST00000357475 CHRNA7P36544 502 aa19.89■□□□□ 0.77
SSBP3-202ENST00000357475 RAB32Q13637 225 aa19.89■□□□□ 0.77
SSBP3-202ENST00000357475 AKIRIN2Q53H80 203 aa19.89■□□□□ 0.77
SSBP3-202ENST00000357475 OR4F5Q8NH21 305 aa19.89■□□□□ 0.77
SSBP3-202ENST00000357475 ZNF436Q9C0F3 470 aaPredicted RBP19.89■□□□□ 0.77
SSBP3-202ENST00000357475 RCL1Q9Y2P8 373 aaKnown RBP19.89■□□□□ 0.77
SSBP3-202ENST00000357475 FAM90A26D6RGX4 464 aa19.88■□□□□ 0.77
SSBP3-202ENST00000357475 PRH1P02810 166 aa19.88■□□□□ 0.77
SSBP3-202ENST00000357475 SRSF4Q08170 494 aaKnown RBP19.88■□□□□ 0.77
SSBP3-202ENST00000357475 HIST2H2BDQ6DRA6 164 aa19.88■□□□□ 0.77
SSBP3-202ENST00000357475 NMES1Q9C002 83 aa19.88■□□□□ 0.77
SSBP3-202ENST00000357475 K7EPK0 472 aa19.87■□□□□ 0.77
SSBP3-202ENST00000357475 SSSCA1O60232 199 aa19.87■□□□□ 0.77
SSBP3-202ENST00000357475 LRRC37A5PQ49AS3 106 aa19.87■□□□□ 0.77
SSBP3-202ENST00000357475 DTD1Q8TEA8 209 aa19.87■□□□□ 0.77
SSBP3-202ENST00000357475 ZNF580Q9UK33 172 aa19.87■□□□□ 0.77
SSBP3-202ENST00000357475 LSM5Q9Y4Y9 91 aaKnown RBP19.87■□□□□ 0.77
SSBP3-202ENST00000357475 WRBO00258 174 aa19.86■□□□□ 0.77
SSBP3-202ENST00000357475 SYNGR2O43760 224 aa19.86■□□□□ 0.77
SSBP3-202ENST00000357475 TMEM50AO95807 157 aa19.86■□□□□ 0.77
SSBP3-202ENST00000357475 CTRB1P17538 263 aa19.86■□□□□ 0.77
SSBP3-202ENST00000357475 PSMB6P28072 239 aa19.86■□□□□ 0.77
SSBP3-202ENST00000357475 S100A10P60903 97 aa19.86■□□□□ 0.77
SSBP3-202ENST00000357475 CTRB2Q6GPI1 263 aa19.86■□□□□ 0.77
SSBP3-202ENST00000357475 LCNL1Q6ZST4 164 aa19.86■□□□□ 0.77
SSBP3-202ENST00000357475 TTC9CQ8N5M4 171 aa19.86■□□□□ 0.77
SSBP3-202ENST00000357475 OR2C3Q8N628 320 aa19.86■□□□□ 0.77
SSBP3-202ENST00000357475 RNF114Q9Y508 228 aa19.86■□□□□ 0.77
SSBP3-202ENST00000357475 DMRT1Q9Y5R6 373 aa19.86■□□□□ 0.77
SSBP3-202ENST00000357475 CLPSL1A2RUU4 121 aa19.86■□□□□ 0.77
SSBP3-202ENST00000357475 HAX1O00165 279 aa19.86■□□□□ 0.77
SSBP3-202ENST00000357475 CD83Q01151 205 aa19.86■□□□□ 0.77
SSBP3-202ENST00000357475 DEFA5Q01523 94 aa19.86■□□□□ 0.77
SSBP3-202ENST00000357475 TMEM267Q0VDI3 215 aaPredicted RBP19.86■□□□□ 0.77
SSBP3-202ENST00000357475 KLHDC1Q8N7A1 406 aa19.86■□□□□ 0.77
SSBP3-202ENST00000357475 WIPF2Q8TF74 440 aaPredicted RBP19.86■□□□□ 0.77
SSBP3-202ENST00000357475 PPP1R1CQ8WVI7 109 aa19.86■□□□□ 0.77
SSBP3-202ENST00000357475 SRSF8Q9BRL6 282 aaKnown RBP19.86■□□□□ 0.77
SSBP3-202ENST00000357475 FBXO24O75426 580 aa19.85■□□□□ 0.77
SSBP3-202ENST00000357475 MFAP2P55001 183 aa19.85■□□□□ 0.77
SSBP3-202ENST00000357475 PROK1P58294 105 aa19.85■□□□□ 0.77
SSBP3-202ENST00000357475 CENPVQ7Z7K6 275 aaPredicted RBP19.85■□□□□ 0.77
SSBP3-202ENST00000357475 FAM110DQ8TAY7 271 aaPredicted RBP19.85■□□□□ 0.77
SSBP3-202ENST00000357475 P2RX4Q99571 388 aa19.85■□□□□ 0.77
SSBP3-202ENST00000357475 HEYLQ9NQ87 328 aaPredicted RBP19.85■□□□□ 0.77
SSBP3-202ENST00000357475 PSMB11A5LHX3 300 aa19.84■□□□□ 0.77
SSBP3-202ENST00000357475 NPIPB5A8MRT5 1133 aa19.84■□□□□ 0.77
SSBP3-202ENST00000357475 CRYGCP07315 174 aa19.84■□□□□ 0.77
SSBP3-202ENST00000357475 BCAP31P51572 246 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms