RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 SERTM2A0A1B0GWG4 89 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 SLC17A3O00476 420 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 FCN1O00602 326 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 HAND1O96004 215 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 HBZP02008 142 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 ZNF90Q03938 601 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 DCAF12Q5T6F0 453 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 LINC00596Q86U02 117 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 ZNF645Q8N7E2 425 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 BORCS7Q96B45 105 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 DEFB127Q9H1M4 99 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 HEYLQ9NQ87 328 aaPredicted RBP6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 POLDIP2Q9Y2S7 368 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 ARL14EPLP0DKL9 152 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 SCGB1A1P11684 91 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 CD1BP29016 333 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 SLC35B1P78383 322 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 HLA-DRB5Q30154 266 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 MOB1BQ7L9L4 216 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 CT55Q8WUE5 264 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 ATP6V0BQ99437 205 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 DCTN5Q9BTE1 182 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 HINT2Q9BX68 163 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 QTRT1Q9BXR0 403 aaKnown RBP6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 ABI3Q9P2A4 366 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 SCO2A0A1W2PP80 73 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 M0R1X1 148 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 FCGR3BO75015 233 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 LYZL6O75951 148 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 NUDT3O95989 172 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 OR1C1Q15619 314 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 MIC13Q5XKP0 118 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 DEFB125Q8N687 156 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 OR1B1Q8NGR6 318 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 TMEM45BQ96B21 275 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 SFRP2Q96HF1 295 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 LOXL2Q9Y4K0 774 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 TIMM9Q9Y5J7 89 aa6.86□□□□□ -1.31
CDC42SE1-201ENST00000357235 TRAV9-2A0A087WT02 112 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 TRBV6-6A0A0A6YYG2 114 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 GAGE10A6NGK3 116 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 LINC00473A8K010 186 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 FAM90A26D6RGX4 464 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 PET117Q6UWS5 81 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 C5orf17Q8NAS9 161 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 C5orf30Q96GV9 206 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 TTTY12Q9BZ98 90 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 GNB4Q9HAV0 340 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 DCHS1Q96JQ0 3298 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 KIAA1549Q9HCM3 1950 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 TMEM30CPA0ZSE6 113 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 MLNRO43193 412 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 ACTL6BO94805 426 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 CYC1P08574 325 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 IGLC1P0CG04 106 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 PPIAL4GP0DN37 164 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 RELBQ01201 579 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 TBC1D28Q2M2D7 210 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 PRAMEF5Q5TYX0 476 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 PRAMEF6Q5VXH4 476 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 C19orf35Q6ZS72 473 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 ABHD12Q8N2K0 398 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 TMEM251Q8N6I4 163 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 STXBP6Q8NFX7 210 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 SLC25A40Q8TBP6 338 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 FAM173AQ9BQD7 235 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 PKIBQ9C010 78 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 GNG12Q9UBI6 72 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 PEF1Q9UBV8 284 aaKnown RBP6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 PILRBQ9UKJ0 227 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 MED13Q9UHV7 2174 aa6.85□□□□□ -1.31
CDC42SE1-201ENST00000357235 TRBV20OR9-2A0A075B6H5 130 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 J3QR06 171 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 PDE6DO43924 150 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 NEURL1O76050 574 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 IER3P46695 156 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 SMAGPQ0VAQ4 97 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 NRN1LQ496H8 165 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 LCN12Q6JVE5 192 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 C6orf15Q6UXA7 325 aaPredicted RBP6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 TMEM105Q8N8V8 129 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 LINC00470Q9BZP3 86 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 OR51B2Q9Y5P1 312 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 CUL9Q8IWT3 2517 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 IGKV3D-15A0A087WSY6 115 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 TRAV8-6A0A0B4J262 113 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 MUC21A0A0G2JKD1 596 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 MUC21A0A140T8X8 626 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 ZNF324O75467 553 aaPredicted RBP6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 FRMD6-AS1P0C7T7 363 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 IGLL1P15814 213 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 AZU1P20160 251 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 FABP6P51161 128 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 KIAA1644Q3SXP7 199 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 MUC21Q5SSG8 566 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 C12orf54Q6X4T0 127 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 OR10G8Q8NGN5 311 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 OR4A16Q8NH70 328 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 OCC1Q8TAD7 63 aa6.84□□□□□ -1.31
CDC42SE1-201ENST00000357235 KCNS1Q96KK3 526 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms