RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 LEMD1Q68G75 181 aa12.59□□□□□ -0.39
PTBP1-203ENST00000356948 STARD4Q96DR4 205 aa12.59□□□□□ -0.39
PTBP1-203ENST00000356948 P2RX4Q99571 388 aa12.59□□□□□ -0.39
PTBP1-203ENST00000356948 CRISP2P16562 243 aa12.59□□□□□ -0.39
PTBP1-203ENST00000356948 KITLGP21583 273 aa12.59□□□□□ -0.39
PTBP1-203ENST00000356948 CDC34P49427 236 aaPredicted RBP12.59□□□□□ -0.39
PTBP1-203ENST00000356948 TPPP2P59282 170 aa12.59□□□□□ -0.39
PTBP1-203ENST00000356948 C1orf194Q5T5A4 169 aa12.59□□□□□ -0.39
PTBP1-203ENST00000356948 UNQ5815/PRO19632Q6UWF5 114 aa12.59□□□□□ -0.39
PTBP1-203ENST00000356948 K7EM74 188 aa12.58□□□□□ -0.4
PTBP1-203ENST00000356948 HRASP01112 189 aa12.58□□□□□ -0.4
PTBP1-203ENST00000356948 GATA2P23769 480 aaPredicted RBP12.58□□□□□ -0.4
PTBP1-203ENST00000356948 CEACAM8P31997 349 aaPredicted RBP12.58□□□□□ -0.4
PTBP1-203ENST00000356948 MAJINQ3KP22 176 aa12.58□□□□□ -0.4
PTBP1-203ENST00000356948 TREML4Q6UXN2 200 aa12.58□□□□□ -0.4
PTBP1-203ENST00000356948 ZNF596Q8TC21 504 aa12.58□□□□□ -0.4
PTBP1-203ENST00000356948 OR2V2Q96R30 315 aa12.58□□□□□ -0.4
PTBP1-203ENST00000356948 SEPSECSQ9HD40 501 aaKnown RBP12.58□□□□□ -0.4
PTBP1-203ENST00000356948 NBASA2RRP1 2371 aa12.58□□□□□ -0.4
PTBP1-203ENST00000356948 MDFIC2A0A1B0GVS7 189 aa12.58□□□□□ -0.4
PTBP1-203ENST00000356948 COX5AP20674 150 aa12.58□□□□□ -0.4
PTBP1-203ENST00000356948 HTD2P86397 168 aa12.58□□□□□ -0.4
PTBP1-203ENST00000356948 CENPVQ7Z7K6 275 aaPredicted RBP12.58□□□□□ -0.4
PTBP1-203ENST00000356948 MGST2Q99735 147 aa12.58□□□□□ -0.4
PTBP1-203ENST00000356948 HEYLQ9NQ87 328 aaPredicted RBP12.58□□□□□ -0.4
PTBP1-203ENST00000356948 TMEM210A6NLX4 147 aa12.58□□□□□ -0.4
PTBP1-203ENST00000356948 FAM90A26D6RGX4 464 aa12.58□□□□□ -0.4
PTBP1-203ENST00000356948 M0R1B8 84 aa12.58□□□□□ -0.4
PTBP1-203ENST00000356948 RAB29O14966 203 aa12.58□□□□□ -0.4
PTBP1-203ENST00000356948 ARL14EPLP0DKL9 152 aa12.58□□□□□ -0.4
PTBP1-203ENST00000356948 OR5AU1Q8NGC0 362 aa12.58□□□□□ -0.4
PTBP1-203ENST00000356948 SERTAD4Q9NUC0 356 aa12.58□□□□□ -0.4
PTBP1-203ENST00000356948 NAV3Q8IVL0 2385 aa12.57□□□□□ -0.4
PTBP1-203ENST00000356948 FCN1O00602 326 aa12.57□□□□□ -0.4
PTBP1-203ENST00000356948 LOXL3P58215 753 aa12.57□□□□□ -0.4
PTBP1-203ENST00000356948 BRS3P32247 399 aa12.57□□□□□ -0.4
PTBP1-203ENST00000356948 CDKN1AP38936 164 aa12.57□□□□□ -0.4
PTBP1-203ENST00000356948 TCL1AP56279 114 aa12.57□□□□□ -0.4
PTBP1-203ENST00000356948 ACY3Q96HD9 319 aa12.57□□□□□ -0.4
PTBP1-203ENST00000356948 CTDSP1Q9GZU7 261 aa12.57□□□□□ -0.4
PTBP1-203ENST00000356948 TMEM242Q9NWH2 141 aa12.57□□□□□ -0.4
PTBP1-203ENST00000356948 SCO2A0A1W2PP80 73 aa12.56□□□□□ -0.4
PTBP1-203ENST00000356948 SMIM21Q3B7S5 101 aa12.56□□□□□ -0.4
PTBP1-203ENST00000356948 GBGT1Q8N5D6 347 aa12.56□□□□□ -0.4
PTBP1-203ENST00000356948 ZCCHC14Q8WYQ9 949 aaKnown RBP12.56□□□□□ -0.4
PTBP1-203ENST00000356948 IFI27L2Q9H2X8 130 aa12.56□□□□□ -0.4
PTBP1-203ENST00000356948 ZNF71Q9NQZ8 489 aaPredicted RBP12.56□□□□□ -0.4
PTBP1-203ENST00000356948 DIRC3C9JPN6 131 aa12.56□□□□□ -0.4
PTBP1-203ENST00000356948 ACTL6BO94805 426 aa12.56□□□□□ -0.4
PTBP1-203ENST00000356948 ZNF718Q3SXZ3 478 aa12.56□□□□□ -0.4
PTBP1-203ENST00000356948 PARD6GQ9BYG4 376 aaPredicted RBP12.56□□□□□ -0.4
PTBP1-203ENST00000356948 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.56□□□□□ -0.4
PTBP1-203ENST00000356948 SPINT2O43291 252 aa12.56□□□□□ -0.4
PTBP1-203ENST00000356948 IER3P46695 156 aa12.56□□□□□ -0.4
PTBP1-203ENST00000356948 ACSF3Q4G176 576 aaPredicted RBP12.56□□□□□ -0.4
PTBP1-203ENST00000356948 PRR31Q5SQ13 230 aa12.56□□□□□ -0.4
PTBP1-203ENST00000356948 LINC01551Q86U37 167 aa12.56□□□□□ -0.4
PTBP1-203ENST00000356948 FAM90A1Q86YD7 464 aa12.56□□□□□ -0.4
PTBP1-203ENST00000356948 ZNF586Q9NXT0 402 aa12.56□□□□□ -0.4
PTBP1-203ENST00000356948 A0A1W2PPV4 95 aa12.55□□□□□ -0.4
PTBP1-203ENST00000356948 ITLN1Q8WWA0 313 aa12.55□□□□□ -0.4
PTBP1-203ENST00000356948 SLC35E1Q96K37 410 aa12.55□□□□□ -0.4
PTBP1-203ENST00000356948 TMEM140Q9NV12 185 aa12.55□□□□□ -0.4
PTBP1-203ENST00000356948 YTHDF2Q9Y5A9 579 aaKnown RBP12.55□□□□□ -0.4
PTBP1-203ENST00000356948 M0QZ24 198 aa12.55□□□□□ -0.4
PTBP1-203ENST00000356948 GFRA3O60609 400 aa12.55□□□□□ -0.4
PTBP1-203ENST00000356948 IGHG3P01860 377 aa12.55□□□□□ -0.4
PTBP1-203ENST00000356948 MGST1P10620 155 aaKnown RBP12.55□□□□□ -0.4
PTBP1-203ENST00000356948 IL3RAP26951 378 aa12.55□□□□□ -0.4
PTBP1-203ENST00000356948 SPATA45Q537H7 98 aa12.55□□□□□ -0.4
PTBP1-203ENST00000356948 CT45A1Q5HYN5 189 aa12.55□□□□□ -0.4
PTBP1-203ENST00000356948 CT45A3Q8NHU0 189 aa12.55□□□□□ -0.4
PTBP1-203ENST00000356948 NEIL1Q96FI4 390 aaPredicted RBP12.55□□□□□ -0.4
PTBP1-203ENST00000356948 MIEN1Q9BRT3 115 aa12.55□□□□□ -0.4
PTBP1-203ENST00000356948 TIMM9Q9Y5J7 89 aa12.55□□□□□ -0.4
PTBP1-203ENST00000356948 APC2O95996 2303 aa12.55□□□□□ -0.4
PTBP1-203ENST00000356948 SLC17A3O00476 420 aa12.55□□□□□ -0.4
PTBP1-203ENST00000356948 IGHV3-48P01763 117 aa12.55□□□□□ -0.4
PTBP1-203ENST00000356948 MRPS11P82912 194 aaKnown RBP12.55□□□□□ -0.4
PTBP1-203ENST00000356948 RELBQ01201 579 aa12.55□□□□□ -0.4
PTBP1-203ENST00000356948 HLA-DRB5Q30154 266 aa12.55□□□□□ -0.4
PTBP1-203ENST00000356948 ZNF474Q6S9Z5 364 aaPredicted RBP12.55□□□□□ -0.4
PTBP1-203ENST00000356948 OR4A16Q8NH70 328 aa12.55□□□□□ -0.4
PTBP1-203ENST00000356948 WDR83OSQ9Y284 106 aa12.55□□□□□ -0.4
PTBP1-203ENST00000356948 SERF1AO75920 110 aa12.54□□□□□ -0.4
PTBP1-203ENST00000356948 PRB3Q04118 309 aaPredicted RBP12.54□□□□□ -0.4
PTBP1-203ENST00000356948 SAPCD1Q5SSQ6 148 aa12.54□□□□□ -0.4
PTBP1-203ENST00000356948 ZNF439Q8NDP4 499 aa12.54□□□□□ -0.4
PTBP1-203ENST00000356948 GCM1Q9NP62 436 aa12.54□□□□□ -0.4
PTBP1-203ENST00000356948 IGKV1-16P04430 117 aa12.54□□□□□ -0.4
PTBP1-203ENST00000356948 VWC2Q2TAL6 325 aa12.54□□□□□ -0.4
PTBP1-203ENST00000356948 ZGRF1Q86YA3 2104 aa12.54□□□□□ -0.4
PTBP1-203ENST00000356948 RND1Q92730 232 aa12.54□□□□□ -0.4
PTBP1-203ENST00000356948 TMEM106BQ9NUM4 274 aa12.54□□□□□ -0.4
PTBP1-203ENST00000356948 LHFPL4Q7Z7J7 247 aa12.54□□□□□ -0.4
PTBP1-203ENST00000356948 FAM216BQ8N7L0 139 aa12.54□□□□□ -0.4
PTBP1-203ENST00000356948 ZBTB34Q8NCN2 500 aa12.54□□□□□ -0.4
PTBP1-203ENST00000356948 ST6GALNAC6Q969X2 333 aa12.54□□□□□ -0.4
PTBP1-203ENST00000356948 HSD17B10Q99714 261 aaKnown RBP12.54□□□□□ -0.4
PTBP1-203ENST00000356948 GGTLC1Q9BX51 225 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms