RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 TCF19Q9Y242 345 aa8.37□□□□□ -1.07
PTPRA-203ENST00000356147 A0A1W2PS18 150 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 HELTA6NFD8 242 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 A8MXE2 369 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 TIMM8AO60220 97 aaPredicted RBP8.36□□□□□ -1.07
PTPRA-203ENST00000356147 IGHV3-48P01763 117 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 VDAC2P45880 294 aaPredicted RBP8.36□□□□□ -1.07
PTPRA-203ENST00000356147 SLC35E4Q6ICL7 350 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 LHFPL4Q7Z7J7 247 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 CNEP1R1Q8N9A8 125 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 FAM168AQ92567 244 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 RAB1CQ92928 201 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 CDX2Q99626 313 aaPredicted RBP8.36□□□□□ -1.07
PTPRA-203ENST00000356147 DUSP13Q9UII6 198 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 NDUFB8O95169 186 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 HES3Q5TGS1 186 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 UNQ5815/PRO19632Q6UWF5 114 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 SPRR3Q9UBC9 169 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 YLPM1P49750 1951 aaKnown RBP8.36□□□□□ -1.07
PTPRA-203ENST00000356147 SPINT2O43291 252 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 C3orf79P0CE67 100 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 IGHV1-2P23083 117 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 GPR6P46095 362 aaPredicted RBP8.36□□□□□ -1.07
PTPRA-203ENST00000356147 SPRNQ5BIV9 151 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 LRRC29Q8WV35 223 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 NANOS1Q8WY41 292 aaKnown RBP8.36□□□□□ -1.07
PTPRA-203ENST00000356147 ST6GALNAC6Q969X2 333 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 PLXNB1O43157 2135 aa8.36□□□□□ -1.07
PTPRA-203ENST00000356147 HYPMO75409 117 aa8.35□□□□□ -1.07
PTPRA-203ENST00000356147 CA2P00918 260 aa8.35□□□□□ -1.07
PTPRA-203ENST00000356147 OR5G3P0C626 314 aa8.35□□□□□ -1.07
PTPRA-203ENST00000356147 PRB4P10163 310 aaPredicted RBP8.35□□□□□ -1.07
PTPRA-203ENST00000356147 HNRNPA3P51991 378 aaKnown RBP8.35□□□□□ -1.07
PTPRA-203ENST00000356147 ERVK-16P61578 105 aa8.35□□□□□ -1.07
PTPRA-203ENST00000356147 RELBQ01201 579 aa8.35□□□□□ -1.07
PTPRA-203ENST00000356147 COL5A1-AS1Q5SY13 56 aa8.35□□□□□ -1.07
PTPRA-203ENST00000356147 SLC35E1Q96K37 410 aa8.35□□□□□ -1.07
PTPRA-203ENST00000356147 NPVFQ9HCQ7 196 aa8.35□□□□□ -1.07
PTPRA-203ENST00000356147 PRSS46E5RG02 174 aa8.35□□□□□ -1.07
PTPRA-203ENST00000356147 BMPR1BO00238 502 aa8.35□□□□□ -1.07
PTPRA-203ENST00000356147 CD24P25063 80 aa8.35□□□□□ -1.07
PTPRA-203ENST00000356147 RHOBP62745 196 aa8.35□□□□□ -1.07
PTPRA-203ENST00000356147 MRPL49Q13405 166 aaKnown RBP8.35□□□□□ -1.07
PTPRA-203ENST00000356147 PRR27Q6MZM9 219 aa8.35□□□□□ -1.07
PTPRA-203ENST00000356147 TEPPQ6URK8 271 aa8.35□□□□□ -1.07
PTPRA-203ENST00000356147 ZNF318Q5VUA4 2279 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 TRAV5A0A0B4J249 113 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 A0A1W2PN81 502 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 C15orf65H3BRN8 121 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 NPY1RP25929 384 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 RELQ04864 619 aaPredicted RBP8.34□□□□□ -1.07
PTPRA-203ENST00000356147 TMEM136Q6ZRR5 245 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 C1orf174Q8IYL3 243 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 S1PR3Q99500 378 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 SSBP4Q9BWG4 385 aaPredicted RBP8.34□□□□□ -1.07
PTPRA-203ENST00000356147 PLCE1Q9P212 2302 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 GGTLC3B5MD39 225 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 C9orf172C9J069 976 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 GNG10P50151 68 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 SLAQ13239 276 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 MORN2Q502X0 79 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 Q56UQ5 140 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 MORN5Q5VZ52 161 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 TDHQ8IZJ6 230 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 RNASE8Q8TDE3 154 aaKnown RBP8.34□□□□□ -1.07
PTPRA-203ENST00000356147 GMPPAQ96IJ6 420 aaPredicted RBP8.34□□□□□ -1.07
PTPRA-203ENST00000356147 RNF2Q99496 336 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 PLEKHA3Q9HB20 300 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 TPRP12270 2363 aaKnown RBP8.34□□□□□ -1.07
PTPRA-203ENST00000356147 NAV3Q8IVL0 2385 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 KALRNO60229 2985 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 PTPRBP23467 1997 aa8.34□□□□□ -1.07
PTPRA-203ENST00000356147 IQCF6A8MYZ5 107 aa8.34□□□□□ -1.08
PTPRA-203ENST00000356147 CER1O95813 267 aa8.34□□□□□ -1.08
PTPRA-203ENST00000356147 PRDX2P32119 198 aa8.34□□□□□ -1.08
PTPRA-203ENST00000356147 PMCHL1Q16048 86 aa8.34□□□□□ -1.08
PTPRA-203ENST00000356147 DUX4L9Q6RFH8 374 aaPredicted RBP8.34□□□□□ -1.08
PTPRA-203ENST00000356147 SLC24A4Q8NFF2 622 aa8.34□□□□□ -1.08
PTPRA-203ENST00000356147 OR2Z1Q8NG97 314 aa8.34□□□□□ -1.08
PTPRA-203ENST00000356147 SFXN3Q9BWM7 321 aa8.34□□□□□ -1.08
PTPRA-203ENST00000356147 HES4Q9HCC6 221 aa8.34□□□□□ -1.08
PTPRA-203ENST00000356147 LSM4Q9Y4Z0 139 aaKnown RBP8.34□□□□□ -1.08
PTPRA-203ENST00000356147 IGKV1OR2-108A0A075B7D4 117 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 DPRXA6NFQ7 191 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 M0QZ24 198 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 CCL25O15444 150 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 SP1P08047 785 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 IGLC2P0DOY2 106 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 IGLC3P0DOY3 106 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 Q0VG73 95 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 NIT1Q86X76 327 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 OR9G1Q8NH87 305 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 NABP2Q9BQ15 211 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 CDC42EP3Q9UKI2 254 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 ZFP30Q9Y2G7 519 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 LAMTOR2Q9Y2Q5 125 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 CBY1Q9Y3M2 126 aa8.33□□□□□ -1.08
PTPRA-203ENST00000356147 INTS1Q8N201 2190 aaKnown RBP8.33□□□□□ -1.08
PTPRA-203ENST00000356147 A0A1W2PNU3 283 aaPredicted RBP8.33□□□□□ -1.08
PTPRA-203ENST00000356147 SH2D7A6NKC9 451 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms