RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 M0R135 149 aa13.06□□□□□ -0.32
RTN3-205ENST00000356000 OR9G9P0C7N8 305 aa13.06□□□□□ -0.32
RTN3-205ENST00000356000 DEFB110Q30KQ9 67 aa13.06□□□□□ -0.32
RTN3-205ENST00000356000 NRN1LQ496H8 165 aa13.06□□□□□ -0.32
RTN3-205ENST00000356000 GJC3Q8NFK1 279 aa13.06□□□□□ -0.32
RTN3-205ENST00000356000 RLN3Q8WXF3 142 aa13.06□□□□□ -0.32
RTN3-205ENST00000356000 CACNG8Q8WXS5 425 aa13.06□□□□□ -0.32
RTN3-205ENST00000356000 CHCHD1Q96BP2 118 aaKnown RBP13.06□□□□□ -0.32
RTN3-205ENST00000356000 ZNF799Q96GE5 643 aa13.06□□□□□ -0.32
RTN3-205ENST00000356000 RABAC1Q9UI14 185 aa13.06□□□□□ -0.32
RTN3-205ENST00000356000 MUC22E2RYF6 1773 aaPredicted RBP13.06□□□□□ -0.32
RTN3-205ENST00000356000 MED12LQ86YW9 2145 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 FAM90A10PA6NDY2 464 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 FAM90A18PA6NE21 464 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 FAM90A16PA6NEW6 464 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 FAM90A20PA6NIJ5 464 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 FAM90A8PA6NJQ4 464 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 FAM90A7PA6NKC0 464 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 FAM90A22PA8MWA6 464 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 FAM90A12PA8MX19 464 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 FAM90A5PA8MXJ8 464 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 FAM90A23PA8MXZ1 464 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 TNFSF11O14788 317 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 FAM90A15PP0C7V4 464 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 FAM90A13PP0C7W8 464 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 FAM90A14PP0C7W9 464 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 FAM90A24PP0C7X0 464 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 GCHFRP30047 84 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 SPEM1Q8N4L4 309 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 LRRC29Q8WV35 223 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 DEPPQ9NTK1 212 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 SERTAD4Q9NUC0 356 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 CCL16O15467 120 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 TIMM23BQ5SRD1 257 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 IBA57Q5T440 356 aaKnown RBP13.05□□□□□ -0.32
RTN3-205ENST00000356000 SAMD5Q5TGI4 173 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 FGFRL1Q8N441 504 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 VGLL1Q99990 258 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 MAP1LC3CQ9BXW4 147 aa13.05□□□□□ -0.32
RTN3-205ENST00000356000 J3KRW8 73 aa13.04□□□□□ -0.32
RTN3-205ENST00000356000 IGLV2-14P01704 120 aa13.04□□□□□ -0.32
RTN3-205ENST00000356000 RPS16P62249 146 aaKnown RBP13.04□□□□□ -0.32
RTN3-205ENST00000356000 TIGITQ495A1 244 aa13.04□□□□□ -0.32
RTN3-205ENST00000356000 LINC01545Q5VT33 79 aa13.04□□□□□ -0.32
RTN3-205ENST00000356000 HLA-DQA1Q5Y7H0 255 aa13.04□□□□□ -0.32
RTN3-205ENST00000356000 TMEM42Q69YG0 159 aa13.04□□□□□ -0.32
RTN3-205ENST00000356000 GPR82Q96P67 336 aa13.04□□□□□ -0.32
RTN3-205ENST00000356000 ERG28Q9UKR5 140 aa13.04□□□□□ -0.32
RTN3-205ENST00000356000 CDH23Q9H251 3354 aa13.04□□□□□ -0.32
RTN3-205ENST00000356000 BRI3O95415 125 aa13.04□□□□□ -0.32
RTN3-205ENST00000356000 OR5AL1P0C617 328 aa13.04□□□□□ -0.32
RTN3-205ENST00000356000 SSBP2P81877 361 aaPredicted RBP13.04□□□□□ -0.32
RTN3-205ENST00000356000 CEACAM16Q2WEN9 425 aa13.04□□□□□ -0.32
RTN3-205ENST00000356000 ZNF645Q8N7E2 425 aa13.04□□□□□ -0.32
RTN3-205ENST00000356000 LIN7CQ9NUP9 197 aaKnown RBP13.04□□□□□ -0.32
RTN3-205ENST00000356000 PRSS38A1L453 326 aa13.03□□□□□ -0.32
RTN3-205ENST00000356000 OPRK1P41145 380 aa13.03□□□□□ -0.32
RTN3-205ENST00000356000 OR4A16Q8NH70 328 aa13.03□□□□□ -0.32
RTN3-205ENST00000356000 ST8SIA1Q92185 356 aa13.03□□□□□ -0.32
RTN3-205ENST00000356000 RNF183Q96D59 192 aa13.03□□□□□ -0.32
RTN3-205ENST00000356000 KCNS2Q9ULS6 477 aa13.03□□□□□ -0.32
RTN3-205ENST00000356000 R4GN57 208 aa13.03□□□□□ -0.32
RTN3-205ENST00000356000 F8W1H4 67 aa13.03□□□□□ -0.32
RTN3-205ENST00000356000 TNFRSF13BO14836 293 aaPredicted RBP13.03□□□□□ -0.32
RTN3-205ENST00000356000 IGKV3-11P04433 115 aa13.03□□□□□ -0.32
RTN3-205ENST00000356000 SSX8Q7RTT4 187 aa13.03□□□□□ -0.32
RTN3-205ENST00000356000 OR10D3Q8NH80 312 aa13.03□□□□□ -0.32
RTN3-205ENST00000356000 DPF1Q92782 380 aa13.03□□□□□ -0.32
RTN3-205ENST00000356000 GALMQ96C23 342 aa13.03□□□□□ -0.32
RTN3-205ENST00000356000 ZG16O60844 167 aa13.02□□□□□ -0.32
RTN3-205ENST00000356000 NEURL1O76050 574 aa13.02□□□□□ -0.32
RTN3-205ENST00000356000 CA1P00915 261 aaPredicted RBP13.02□□□□□ -0.32
RTN3-205ENST00000356000 IGLV2-8P01709 118 aa13.02□□□□□ -0.32
RTN3-205ENST00000356000 MFAP2P55001 183 aa13.02□□□□□ -0.32
RTN3-205ENST00000356000 FBXW4P57775 412 aa13.02□□□□□ -0.32
RTN3-205ENST00000356000 DHRS13Q6UX07 377 aa13.02□□□□□ -0.32
RTN3-205ENST00000356000 TMEM92Q6UXU6 159 aa13.02□□□□□ -0.32
RTN3-205ENST00000356000 YAF2Q8IY57 180 aa13.02□□□□□ -0.32
RTN3-205ENST00000356000 GCSAMQ8N6F7 178 aa13.02□□□□□ -0.32
RTN3-205ENST00000356000 MCRIP2Q9BUT9 160 aaKnown RBP13.02□□□□□ -0.32
RTN3-205ENST00000356000 IL36RNQ9UBH0 155 aa13.02□□□□□ -0.32
RTN3-205ENST00000356000 A0A1W2PRE2 83 aa13.02□□□□□ -0.33
RTN3-205ENST00000356000 LIPFP07098 398 aa13.02□□□□□ -0.33
RTN3-205ENST00000356000 ATP5G2Q06055 141 aa13.02□□□□□ -0.33
RTN3-205ENST00000356000 LYSMD4Q5XG99 296 aa13.02□□□□□ -0.33
RTN3-205ENST00000356000 SFTPA1Q8IWL2 248 aa13.02□□□□□ -0.33
RTN3-205ENST00000356000 TEX45Q8NA69 505 aa13.02□□□□□ -0.33
RTN3-205ENST00000356000 CCL4L1Q8NHW4 92 aa13.02□□□□□ -0.33
RTN3-205ENST00000356000 GRAMD2BQ96HH9 432 aa13.02□□□□□ -0.33
RTN3-205ENST00000356000 PCDH15Q96QU1 1955 aa13.01□□□□□ -0.33
RTN3-205ENST00000356000 NPIPA3F8WFD2 350 aa13.01□□□□□ -0.33
RTN3-205ENST00000356000 H3BML4 177 aa13.01□□□□□ -0.33
RTN3-205ENST00000356000 MPDU1O75352 247 aa13.01□□□□□ -0.33
RTN3-205ENST00000356000 P04436 131 aa13.01□□□□□ -0.33
RTN3-205ENST00000356000 ZNF16P17020 682 aaPredicted RBP13.01□□□□□ -0.33
RTN3-205ENST00000356000 ODF1Q14990 250 aa13.01□□□□□ -0.33
RTN3-205ENST00000356000 WIPI1Q5MNZ9 446 aaPredicted RBP13.01□□□□□ -0.33
RTN3-205ENST00000356000 SH2D2AQ9NP31 389 aa13.01□□□□□ -0.33
RTN3-205ENST00000356000 LAMA2P24043 3122 aaKnown RBP13.01□□□□□ -0.33
RTN3-205ENST00000356000 LOC102723996A0A087X1L8 192 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms