RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 FPR2P25090 351 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 ADMP35318 185 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 INSL3P51460 131 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 SLC10A1Q14973 349 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 PPA1Q15181 289 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 RNPS1Q15287 305 aaKnown RBP4.45□□□□□ -1.7
CD47-201ENST00000355354 SPIN3Q5JUX0 258 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 OR1L6Q8NGR2 347 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 RNF141Q8WVD5 230 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 DUSP13Q9UII6 198 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 LAMP3Q9UQV4 416 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 IGKV2D-26A0A0A0MRZ7 120 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 SEC14L6B5MCN3 397 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 BMPR1BO00238 502 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 GPR137BO60478 399 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 C17orf58Q2M2W7 97 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 PIGMQ9H3S5 423 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 CDH20Q9HBT6 801 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 RPL29P47914 159 aaKnown RBP4.44□□□□□ -1.7
CD47-201ENST00000355354 TAS2R43P59537 309 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 RAC3P60763 192 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 WFDC8Q8IUA0 241 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 MAPK1IP1LQ8NDC0 245 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 SPSB4Q96A44 273 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 IFI27L2Q9H2X8 130 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 C7orf69Q9H7B7 122 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 UBE2J1Q9Y385 318 aaPredicted RBP4.44□□□□□ -1.7
CD47-201ENST00000355354 ISLRO14498 428 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 CST4P01036 141 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 PPIFP30405 207 aaKnown RBP4.44□□□□□ -1.7
CD47-201ENST00000355354 TAGLN2P37802 199 aaKnown RBP4.44□□□□□ -1.7
CD47-201ENST00000355354 RPL31P62899 125 aaKnown RBP4.44□□□□□ -1.7
CD47-201ENST00000355354 C11orf71Q6IPW1 123 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 AAED1Q7RTV5 226 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 C16orf82Q7Z2V1 217 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 ZNF429Q86V71 674 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 ZDHHC22Q8N966 263 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 OXGR1Q96P68 337 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 TMEM208Q9BTX3 173 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 ZNF729A6NN14 1252 aaPredicted RBP4.44□□□□□ -1.7
CD47-201ENST00000355354 CEBPZOSA8MTT3 80 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 CD2P06729 351 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 THBDP07204 575 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 OR10J1P30954 320 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 GNG10P50151 68 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 ZNF80P51504 273 aaPredicted RBP4.44□□□□□ -1.7
CD47-201ENST00000355354 SWI5Q1ZZU3 235 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 CST9LP1Q5W188 147 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 CIARTQ8N365 385 aaPredicted RBP4.44□□□□□ -1.7
CD47-201ENST00000355354 WIPF2Q8TF74 440 aaPredicted RBP4.44□□□□□ -1.7
CD47-201ENST00000355354 IFT22Q9H7X7 185 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 RAB18Q9NP72 206 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 KIAA1456Q9P272 454 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 PSG11Q9UQ72 335 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 C20orf202A1L168 122 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 IFNA6P05013 189 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 TUBG1P23258 451 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 RBP2P50120 134 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 TLE4Q04727 773 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 PLCXD3Q63HM9 321 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 OR10G9Q8NGN4 311 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 OR2D2Q9H210 308 aa4.44□□□□□ -1.7
CD47-201ENST00000355354 hDV102S1A0JD36 115 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 IGHV3-23P01764 117 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 HBZP02008 142 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 AGTR1P30556 359 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 Q3ZCU0 254 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 SOHLH1Q5JUK2 328 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 TMEM14EPQ6UXP3 125 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 EXOC3-AS1Q8N2X6 119 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 TMEM56Q96MV1 263 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 ATP5SQ99766 215 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 GGTLC1Q9BX51 225 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 SLC35B3Q9H1N7 401 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 LYRM2Q9NU23 88 aaPredicted RBP4.43□□□□□ -1.7
CD47-201ENST00000355354 TMEM56-RWDD3S4R434 201 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 LRP1Q07954 4544 aaKnown RBP4.43□□□□□ -1.7
CD47-201ENST00000355354 TRAV17A0A0B4J275 112 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 APOHP02749 345 aaPredicted RBP4.43□□□□□ -1.7
CD47-201ENST00000355354 ZNF728P0DKX0 622 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 ACTBP60709 375 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 RAC1P63000 192 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 ACTG1P63261 375 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 PRAMEF5Q5TYX0 476 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 HCP5Q6MZN7 132 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 DPPA2Q7Z7J5 298 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 PYGO2Q9BRQ0 406 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 UQCC2Q9BRT2 126 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 OR51M1Q9H341 326 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 ZNF286AQ9HBT8 521 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 C11orf21Q9P2W6 132 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 RNF24Q9Y225 148 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 SMKR1H3BMG3 65 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 MOSP00540 346 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 TACSTD2P09758 323 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 SLC35A1P78382 337 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 KCNMB1Q16558 191 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 CLEC7AQ9BXN2 247 aa4.43□□□□□ -1.7
CD47-201ENST00000355354 METTL1Q9UBP6 276 aaKnown RBP4.43□□□□□ -1.7
CD47-201ENST00000355354 ZNF391Q9UJN7 358 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms