RNA–Protein interactions for RNA: ENST00000355233.9

PTPRD-201, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-201ENST00000355233 ZNF708P17019 499 aa4.19□□□□□ -1.74
PTPRD-201ENST00000355233 MESP2Q0VG99 397 aa4.19□□□□□ -1.74
PTPRD-201ENST00000355233 TMEM171Q8WVE6 324 aa4.19□□□□□ -1.74
PTPRD-201ENST00000355233 ZNF492Q9P255 531 aa4.19□□□□□ -1.74
PTPRD-201ENST00000355233 COL4A5P29400 1685 aa4.19□□□□□ -1.74
PTPRD-201ENST00000355233 PEX7O00628 323 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 UBE2L6O14933 153 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 LYZL6O75951 148 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 ARL14EPLP0DKL9 152 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 OTPQ5XKR4 325 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 THSD4Q6ZMP0 1018 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 MRGPRFQ96AM1 343 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 RCC1LQ96I51 464 aaKnown RBP4.18□□□□□ -1.74
PTPRD-201ENST00000355233 RAXQ9Y2V3 346 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 IGHV5-51A0A0C4DH38 117 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 H3BSH0 61 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 HOXB3P14651 431 aaPredicted RBP4.18□□□□□ -1.74
PTPRD-201ENST00000355233 ZFP36L2P47974 494 aaKnown RBP4.18□□□□□ -1.74
PTPRD-201ENST00000355233 SNAI3Q3KNW1 292 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 IL17BQ9UHF5 180 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 H2BFSP57053 126 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 VN1R4Q7Z5H5 301 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 RNF182Q8N6D2 247 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 NRTNQ99748 197 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 TNFRSF12AQ9NP84 129 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 DLEU1O43261 78 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 GPX1P07203 203 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 RSPO4Q2I0M5 234 aaPredicted RBP4.18□□□□□ -1.74
PTPRD-201ENST00000355233 FAM106AQ4KMX7 169 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 FAM231DQ6ZW35 169 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 RNF166Q96A37 237 aaPredicted RBP4.18□□□□□ -1.74
PTPRD-201ENST00000355233 PILRAQ9UKJ1 303 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 H0YIZ8 118 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 BCDIN3DQ7Z5W3 292 aaKnown RBP4.18□□□□□ -1.74
PTPRD-201ENST00000355233 HMGN2P46Q86SG4 172 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 MOB3BQ86TA1 216 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 LRRC29Q8WV35 223 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 NEU4Q8WWR8 484 aaPredicted RBP4.18□□□□□ -1.74
PTPRD-201ENST00000355233 TRGV9Q99603 122 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 ANAPC10Q9UM13 185 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 KLF2Q9Y5W3 355 aaPredicted RBP4.18□□□□□ -1.74
PTPRD-201ENST00000355233 A0A1W2PPV9 198 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 EPOPA6NHQ4 379 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 ZNF250P15622 560 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 PMP22Q01453 160 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 FAM27D1Q5T7N8 215 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 SPSB3Q6PJ21 355 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 VHLLQ6RSH7 139 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 LYZL2Q7Z4W2 148 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 MDP1Q86V88 176 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 GEMIN7Q9H840 131 aaKnown RBP4.18□□□□□ -1.74
PTPRD-201ENST00000355233 RPRMQ9NS64 109 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 A0A1W2PR77 199 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 OR2H2O95918 312 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 MPV17P39210 176 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 SSBP2P81877 361 aaPredicted RBP4.18□□□□□ -1.74
PTPRD-201ENST00000355233 HIST3H2BBQ8N257 126 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 TEX45Q8NA69 505 aa4.18□□□□□ -1.74
PTPRD-201ENST00000355233 WIPF2Q8TF74 440 aaPredicted RBP4.18□□□□□ -1.74
PTPRD-201ENST00000355233 HDHD3Q9BSH5 251 aaPredicted RBP4.18□□□□□ -1.74
PTPRD-201ENST00000355233 H3BMM0 161 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 NDUFB4O95168 129 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 TSPAN13O95857 204 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 ANOS1P23352 680 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 GAGE13Q4V321 117 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 FGFRL1Q8N441 504 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 MRAP2Q96G30 205 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 ABHD17AQ96GS6 310 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 TMEM141Q96I45 108 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 SPCS1Q9Y6A9 102 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 LINC00312Q9Y6C7 94 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 TRAV8-7A0A075B6U6 113 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 A0A1W2PP11 408 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 A0A1W2PRS3 328 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 OVOL1O14753 267 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 IGFBP6P24592 240 aaPredicted RBP4.17□□□□□ -1.74
PTPRD-201ENST00000355233 CENPWQ5EE01 88 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 ZNF774Q6NX45 483 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 LHFPL1Q86WI0 220 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 NUDT8Q8WV74 236 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 RASL10BQ96S79 203 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 KCNE3Q9Y6H6 103 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 HSPB6O14558 160 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 SOCS1O15524 211 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 HLA-DRB4P13762 266 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 ATP5EP56381 51 aaPredicted RBP4.17□□□□□ -1.74
PTPRD-201ENST00000355233 COA6Q5JTJ3 125 aaKnown RBP4.17□□□□□ -1.74
PTPRD-201ENST00000355233 OR8A1Q8NGG7 326 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 C16orf92Q96LL3 132 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 KLHDC2Q9Y2U9 406 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 HLA-DRB4X5D2U9 266 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 FAM90A27PA6NNH2 459 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 SRIP30626 198 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 LYZP61626 148 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 GNB1P62873 340 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 RPL11P62913 178 aaKnown RBP4.17□□□□□ -1.74
PTPRD-201ENST00000355233 ANAPC13Q9BS18 74 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 PRO1933Q9H354 126 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 PLA2G3Q9NZ20 509 aa4.17□□□□□ -1.74
PTPRD-201ENST00000355233 MED12LQ86YW9 2145 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms