RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 ZNF883P0CG24 379 aa9.4□□□□□ -0.9
CAPN9-202ENST00000354537 TAS2R45P59539 299 aa9.4□□□□□ -0.9
CAPN9-202ENST00000354537 SPRR3Q9UBC9 169 aa9.4□□□□□ -0.9
CAPN9-202ENST00000354537 ZNF257Q9Y2Q1 563 aa9.4□□□□□ -0.9
CAPN9-202ENST00000354537 PTPRBP23467 1997 aa9.4□□□□□ -0.9
CAPN9-202ENST00000354537 TRAV3A0A0B4J244 114 aa9.4□□□□□ -0.91
CAPN9-202ENST00000354537 IGHV3-64DA0A0J9YX35 117 aa9.4□□□□□ -0.91
CAPN9-202ENST00000354537 C20orf202A1L168 122 aa9.4□□□□□ -0.91
CAPN9-202ENST00000354537 TIMM8AO60220 97 aaPredicted RBP9.4□□□□□ -0.91
CAPN9-202ENST00000354537 ZNF324O75467 553 aaPredicted RBP9.4□□□□□ -0.91
CAPN9-202ENST00000354537 PPOXP50336 477 aa9.4□□□□□ -0.91
CAPN9-202ENST00000354537 KRTDAPP60985 99 aa9.4□□□□□ -0.91
CAPN9-202ENST00000354537 CXorf67Q86X51 503 aaPredicted RBP9.4□□□□□ -0.91
CAPN9-202ENST00000354537 TPRX1Q8N7U7 411 aa9.4□□□□□ -0.91
CAPN9-202ENST00000354537 FER1L6-AS2Q96M78 137 aa9.4□□□□□ -0.91
CAPN9-202ENST00000354537 IZUMO1RA6ND01 250 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 A6NNC1 897 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 F2Z2F3 143 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 CA2P00918 260 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 IGLC2P0DOY2 106 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 IGLC3P0DOY3 106 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 AMTP48728 403 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 PSG5Q15238 335 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 SPATA45Q537H7 98 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 LRRC29Q8WV35 223 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 NABP2Q9BQ15 211 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 PRNDQ9UKY0 176 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 SDK1Q7Z5N4 2213 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 DOCK10Q96BY6 2186 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 CNTRLQ7Z7A1 2325 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 SRRM5B3KS81 715 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 CGB3P0DN86 165 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 CGB7P0DN87 165 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 CRYBB3P26998 211 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 GUSBP1Q15486 140 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 PMCHL1Q16048 86 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 TMEM164Q5U3C3 297 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 MIR17HGQ75NE6 70 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 VASH2Q86V25 355 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 GCSAMQ8N6F7 178 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 STARD4Q96DR4 205 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 DCTN5Q9BTE1 182 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 DEFB127Q9H1M4 99 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 CLCF1Q9UBD9 225 aa9.39□□□□□ -0.91
CAPN9-202ENST00000354537 IGFBP2P18065 325 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 HOXC12P31275 282 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 ZNF83P51522 516 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 OR5I1Q13606 314 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 RPL39P5Q59GN2 51 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 OR4A47Q6IF82 309 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 FAM231DQ6ZW35 169 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 FAM214BQ7L5A3 538 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 OR5B3Q8NH48 314 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 ORAOV1Q8WV07 137 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 IGF2BP2-AS1Q96M15 143 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 MRPL32Q9BYC8 188 aaKnown RBP9.38□□□□□ -0.91
CAPN9-202ENST00000354537 MRPS16Q9Y3D3 137 aaKnown RBP9.38□□□□□ -0.91
CAPN9-202ENST00000354537 TRIOBPQ9H2D6 2365 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 BMPR1BO00238 502 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 LYZL6O75951 148 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 IGLV2-8P01709 118 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 ZNF134P52741 427 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 SELENOVP59797 346 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 TMEM30BQ3MIR4 351 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 VKORC1L1Q8N0U8 176 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 CHRDL1Q9BU40 450 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 IDI2-AS1Q9NZ38 188 aa9.38□□□□□ -0.91
CAPN9-202ENST00000354537 TRIOO75962 3097 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 IGKV1D-17A0A075B6S4 117 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 DPRXA6NFQ7 191 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 IGLV1-44P01699 117 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 APCSP02743 223 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 FRMD6-AS1P0C7T7 363 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 CHRNB4P30926 498 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 PRCDQ00LT1 54 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 KLF5Q13887 457 aaPredicted RBP9.37□□□□□ -0.91
CAPN9-202ENST00000354537 EDDM3AQ14507 147 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 C2orf83Q53S99 150 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 IBA57Q5T440 356 aaKnown RBP9.37□□□□□ -0.91
CAPN9-202ENST00000354537 NIT1Q86X76 327 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 FAM169BQ8N8A8 192 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 TMEM178AQ8NBL3 297 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 ZNF439Q8NDP4 499 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 FAM103A1Q9BTL3 118 aaKnown RBP9.37□□□□□ -0.91
CAPN9-202ENST00000354537 CALYQ9NYX4 217 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 FOXJ2Q9P0K8 574 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 USF3Q68DE3 2245 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 HYPMO75409 117 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 TFF1P04155 84 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 LTC4SQ16873 150 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 TSKUQ8WUA8 353 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 BORCS7Q96B45 105 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 ZNF503Q96F45 646 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 ZNF331Q9NQX6 463 aaPredicted RBP9.37□□□□□ -0.91
CAPN9-202ENST00000354537 SLC35D1Q9NTN3 355 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 CDC42EP3Q9UKI2 254 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 LAMTOR2Q9Y2Q5 125 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 RNF114Q9Y508 228 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 OR51B2Q9Y5P1 312 aa9.37□□□□□ -0.91
CAPN9-202ENST00000354537 C3orf79P0CE67 100 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms