RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 PPIAL4GP0DN37 164 aa10.81□□□□□ -0.68
COL6A3-203ENST00000353578 ZIC1Q15915 447 aa10.81□□□□□ -0.68
COL6A3-203ENST00000353578 FER1L6-AS1Q8NA97 138 aa10.81□□□□□ -0.68
COL6A3-203ENST00000353578 SSBP3Q9BWW4 388 aaPredicted RBP10.81□□□□□ -0.68
COL6A3-203ENST00000353578 RND2P52198 227 aa10.81□□□□□ -0.68
COL6A3-203ENST00000353578 M0R2P5 195 aa10.81□□□□□ -0.68
COL6A3-203ENST00000353578 Q0VG73 95 aa10.81□□□□□ -0.68
COL6A3-203ENST00000353578 UTF1Q5T230 341 aa10.81□□□□□ -0.68
COL6A3-203ENST00000353578 LINC01545Q5VT33 79 aa10.81□□□□□ -0.68
COL6A3-203ENST00000353578 K7EP34 96 aa10.81□□□□□ -0.68
COL6A3-203ENST00000353578 PRRG2O14669 202 aa10.81□□□□□ -0.68
COL6A3-203ENST00000353578 ADMP35318 185 aa10.81□□□□□ -0.68
COL6A3-203ENST00000353578 RPRMLQ8N4K4 120 aa10.81□□□□□ -0.68
COL6A3-203ENST00000353578 ASCL2Q99929 193 aa10.81□□□□□ -0.68
COL6A3-203ENST00000353578 SEMA5BQ9P283 1151 aa10.81□□□□□ -0.68
COL6A3-203ENST00000353578 ZSWIM8A7E2V4 1837 aa10.81□□□□□ -0.68
COL6A3-203ENST00000353578 BGLAPP02818 100 aa10.81□□□□□ -0.68
COL6A3-203ENST00000353578 TRA2AQ13595 282 aaKnown RBP eCLIP10.81□□□□□ -0.68
COL6A3-203ENST00000353578 PHLDA1Q8WV24 401 aaPredicted RBP10.81□□□□□ -0.68
COL6A3-203ENST00000353578 ALPK3Q96L96 1907 aa10.81□□□□□ -0.68
COL6A3-203ENST00000353578 K7EQS6 105 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 SRSF7Q16629 238 aaKnown RBP eCLIP10.8□□□□□ -0.68
COL6A3-203ENST00000353578 ADAMTSL5Q6ZMM2 481 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 TMEM144Q7Z5S9 345 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 LILRA3Q8N6C8 439 aaPredicted RBP10.8□□□□□ -0.68
COL6A3-203ENST00000353578 TMEM14DPA8MWL7 114 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 GCSAMLQ5JQS6 135 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 EPDR1Q9UM22 224 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 PIGYQ3MUY2 71 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 TEX38Q6PEX7 206 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 SPANXB1Q9NS25 103 aaPredicted RBP10.8□□□□□ -0.68
COL6A3-203ENST00000353578 KLF2Q9Y5W3 355 aaPredicted RBP10.8□□□□□ -0.68
COL6A3-203ENST00000353578 MED13Q9UHV7 2174 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 GAGE12HA6NDE8 117 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 DXOO77932 396 aaKnown RBP10.8□□□□□ -0.68
COL6A3-203ENST00000353578 NTN1O95631 604 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 GPX1P07203 203 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 C1QL3Q5VWW1 255 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 TET1Q8NFU7 2136 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 EBLN2Q6P2I7 272 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 ARHGAP21Q5T5U3 1957 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 MDP1Q86V88 176 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 MRPL43Q8N983 215 aaKnown RBP10.8□□□□□ -0.68
COL6A3-203ENST00000353578 PGPEP1Q9NXJ5 209 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 K7EP13 123 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 SRD5A1P18405 259 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 TWSG1Q9GZX9 223 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 LAMTOR3Q9UHA4 124 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 PLXNB3Q9ULL4 1909 aa10.8□□□□□ -0.68
COL6A3-203ENST00000353578 DEFB108AA8MXU0 73 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 MGST3O14880 152 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 TNFSF14O43557 240 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 LEPP41159 167 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 CX3CL1P78423 397 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 SPINK9Q5DT21 86 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 EDA2RQ9HAV5 297 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 COX5BP10606 129 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 CXCL12P48061 93 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 NABP2Q9BQ15 211 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 HEXA-AS1Q9H8Q6 139 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 C10orf91Q5T1B1 145 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 DEFB132Q7Z7B7 95 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 GFRA4Q9GZZ7 299 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 M0R1B8 84 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 RAMP3O60896 148 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 REG1AP05451 166 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 ACYP1P07311 99 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 FXYD3Q14802 87 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 WNT2BQ93097 391 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 ZNF488Q96MN9 340 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 CSTL1Q9H114 145 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 FAM90A2PQ658T7 463 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 LMO7DNF2Z398 122 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 CXCL13O43927 109 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 PSG1P11464 419 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 SMIM14Q96QK8 99 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 TRBV7-9A0A0J9YWB2 115 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 A6NNC1 897 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 K7ESM1 405 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 SIVA1O15304 175 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 TM4SF20Q53R12 229 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 SLX1AQ9BQ83 275 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 FGF22Q9HCT0 170 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 PRR13Q9NZ81 148 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 ONECUT1Q9UBC0 465 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 IGHG4P01861 327 aa10.79□□□□□ -0.68
COL6A3-203ENST00000353578 INO80CQ6PI98 192 aaPredicted RBP10.79□□□□□ -0.68
COL6A3-203ENST00000353578 A0A0G2JMZ2 1700 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 LRRC37A2A6NM11 1700 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 LRRC37AA6NMS7 1700 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 UPK3AO75631 287 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 SUMO2P61956 95 aaKnown RBP10.78□□□□□ -0.68
COL6A3-203ENST00000353578 FAM78AQ5JUQ0 283 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 WNT5AP41221 380 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 TNFAIP6P98066 277 aaPredicted RBP10.78□□□□□ -0.68
COL6A3-203ENST00000353578 TGIF1Q15583 401 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 KIAA1644Q3SXP7 199 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 PLXND1Q9Y4D7 1925 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 BTCP35070 178 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 GOLT1AQ6ZVE7 132 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms