RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 NBL1P41271 181 aa17.81■□□□□ 0.44
SHMT1-202ENST00000352886 PDZD11Q5EBL8 140 aa17.81■□□□□ 0.44
SHMT1-202ENST00000352886 GFRALQ6UXV0 394 aa17.81■□□□□ 0.44
SHMT1-202ENST00000352886 Q8NA96 180 aa17.81■□□□□ 0.44
SHMT1-202ENST00000352886 DERL1Q9BUN8 251 aa17.81■□□□□ 0.44
SHMT1-202ENST00000352886 SRD5A3Q9H8P0 318 aa17.81■□□□□ 0.44
SHMT1-202ENST00000352886 NDUFB4O95168 129 aa17.81■□□□□ 0.44
SHMT1-202ENST00000352886 CXorf1O96002 111 aa17.81■□□□□ 0.44
SHMT1-202ENST00000352886 GPX4P36969 197 aaPredicted RBP17.81■□□□□ 0.44
SHMT1-202ENST00000352886 RPL31P62899 125 aaKnown RBP17.81■□□□□ 0.44
SHMT1-202ENST00000352886 CLEC12BQ2HXU8 276 aa17.81■□□□□ 0.44
SHMT1-202ENST00000352886 STPG3Q8N7X2 389 aa17.81■□□□□ 0.44
SHMT1-202ENST00000352886 GAL3ST2Q9H3Q3 398 aa17.81■□□□□ 0.44
SHMT1-202ENST00000352886 ADGRG4Q8IZF6 3080 aa17.81■□□□□ 0.44
SHMT1-202ENST00000352886 PFDN5Q99471 154 aa17.8■□□□□ 0.44
SHMT1-202ENST00000352886 GPR61Q9BZJ8 451 aa17.8■□□□□ 0.44
SHMT1-202ENST00000352886 SAP30LQ9HAJ7 183 aa17.8■□□□□ 0.44
SHMT1-202ENST00000352886 PLEKHA3Q9HB20 300 aa17.8■□□□□ 0.44
SHMT1-202ENST00000352886 UPK2O00526 184 aa17.8■□□□□ 0.44
SHMT1-202ENST00000352886 HIST3H2BBQ8N257 126 aa17.8■□□□□ 0.44
SHMT1-202ENST00000352886 SEPSECSQ9HD40 501 aaKnown RBP17.8■□□□□ 0.44
SHMT1-202ENST00000352886 SPTBN2O15020 2390 aa17.79■□□□□ 0.44
SHMT1-202ENST00000352886 ELOA3CA0A087WX78 387 aaPredicted RBP17.79■□□□□ 0.44
SHMT1-202ENST00000352886 CCL3L1P16619 93 aa17.79■□□□□ 0.44
SHMT1-202ENST00000352886 PRCDQ00LT1 54 aa17.79■□□□□ 0.44
SHMT1-202ENST00000352886 EFNB3Q15768 340 aa17.79■□□□□ 0.44
SHMT1-202ENST00000352886 LINC01551Q86U37 167 aa17.79■□□□□ 0.44
SHMT1-202ENST00000352886 OR4X1Q8NH49 305 aa17.79■□□□□ 0.44
SHMT1-202ENST00000352886 AURKAIP1Q9NWT8 199 aaPredicted RBP17.79■□□□□ 0.44
SHMT1-202ENST00000352886 ZNF257Q9Y2Q1 563 aa17.79■□□□□ 0.44
SHMT1-202ENST00000352886 PIEZO2Q9H5I5 2752 aa17.79■□□□□ 0.44
SHMT1-202ENST00000352886 APC2O95996 2303 aa17.79■□□□□ 0.44
SHMT1-202ENST00000352886 A0A1W2PPQ1 181 aa17.79■□□□□ 0.44
SHMT1-202ENST00000352886 F6UZH7 168 aa17.79■□□□□ 0.44
SHMT1-202ENST00000352886 FCN3O75636 299 aa17.79■□□□□ 0.44
SHMT1-202ENST00000352886 RAB31Q13636 194 aa17.79■□□□□ 0.44
SHMT1-202ENST00000352886 TMEM204Q9BSN7 226 aa17.79■□□□□ 0.44
SHMT1-202ENST00000352886 PPP5D1E7EU14 171 aa17.78■□□□□ 0.44
SHMT1-202ENST00000352886 IGFBP2P18065 325 aa17.78■□□□□ 0.44
SHMT1-202ENST00000352886 PYY3Q5JQD4 70 aa17.78■□□□□ 0.44
SHMT1-202ENST00000352886 ZNF833PQ6ZTB9 187 aa17.78■□□□□ 0.44
SHMT1-202ENST00000352886 NEUROG1Q92886 237 aa17.78■□□□□ 0.44
SHMT1-202ENST00000352886 PCGF1Q9BSM1 259 aa17.78■□□□□ 0.44
SHMT1-202ENST00000352886 MEF2CQ06413 473 aaPredicted RBP17.78■□□□□ 0.44
SHMT1-202ENST00000352886 SPATA31B1PQ5VZV4 182 aa17.78■□□□□ 0.44
SHMT1-202ENST00000352886 ZNF714Q96N38 554 aa17.78■□□□□ 0.44
SHMT1-202ENST00000352886 JKAMPQ9P055 326 aa17.78■□□□□ 0.44
SHMT1-202ENST00000352886 MUC6Q6W4X9 2439 aa17.77■□□□□ 0.44
SHMT1-202ENST00000352886 DCHS1Q96JQ0 3298 aa17.77■□□□□ 0.44
SHMT1-202ENST00000352886 PPIAL4EA0A075B759 164 aa17.77■□□□□ 0.44
SHMT1-202ENST00000352886 PPIAL4DF5H284 164 aa17.77■□□□□ 0.44
SHMT1-202ENST00000352886 SAA1P0DJI8 122 aaPredicted RBP17.77■□□□□ 0.44
SHMT1-202ENST00000352886 PPIAL4FP0DN26 164 aa17.77■□□□□ 0.44
SHMT1-202ENST00000352886 CHRNA7P36544 502 aa17.77■□□□□ 0.44
SHMT1-202ENST00000352886 RPL29P47914 159 aaKnown RBP17.77■□□□□ 0.44
SHMT1-202ENST00000352886 CCL17Q92583 94 aa17.77■□□□□ 0.44
SHMT1-202ENST00000352886 FAM122AQ96E09 287 aa17.77■□□□□ 0.44
SHMT1-202ENST00000352886 MRPL20Q9BYC9 149 aaKnown RBP17.77■□□□□ 0.44
SHMT1-202ENST00000352886 PPIAL4AQ9Y536 164 aa17.77■□□□□ 0.44
SHMT1-202ENST00000352886 TEX50A0A1B0GTY4 177 aa17.77■□□□□ 0.43
SHMT1-202ENST00000352886 COL8A2P25067 703 aa17.77■□□□□ 0.43
SHMT1-202ENST00000352886 RHOBP62745 196 aa17.77■□□□□ 0.43
SHMT1-202ENST00000352886 TMEM200BQ69YZ2 307 aa17.77■□□□□ 0.43
SHMT1-202ENST00000352886 OR10D4PQ8NGN7 298 aa17.77■□□□□ 0.43
SHMT1-202ENST00000352886 PKDREJQ9NTG1 2253 aa17.77■□□□□ 0.43
SHMT1-202ENST00000352886 PGPEP1LA6NFU8 196 aa17.76■□□□□ 0.43
SHMT1-202ENST00000352886 TMEM178BH3BS89 294 aa17.76■□□□□ 0.43
SHMT1-202ENST00000352886 RNF224P0DH78 156 aa17.76■□□□□ 0.43
SHMT1-202ENST00000352886 TXNDC17Q9BRA2 123 aa17.76■□□□□ 0.43
SHMT1-202ENST00000352886 BET1LQ9NYM9 111 aa17.76■□□□□ 0.43
SHMT1-202ENST00000352886 GCHFRP30047 84 aa17.76■□□□□ 0.43
SHMT1-202ENST00000352886 PRR20EP86478 221 aa17.76■□□□□ 0.43
SHMT1-202ENST00000352886 PRR20CP86479 221 aa17.76■□□□□ 0.43
SHMT1-202ENST00000352886 PRR20DP86480 221 aa17.76■□□□□ 0.43
SHMT1-202ENST00000352886 PRR20BP86481 221 aa17.76■□□□□ 0.43
SHMT1-202ENST00000352886 PRR20AP86496 221 aa17.76■□□□□ 0.43
SHMT1-202ENST00000352886 H1FXQ92522 213 aaKnown RBP17.76■□□□□ 0.43
SHMT1-202ENST00000352886 LRFN3Q9BTN0 628 aa17.76■□□□□ 0.43
SHMT1-202ENST00000352886 SCO2A0A1W2PP80 73 aa17.75■□□□□ 0.43
SHMT1-202ENST00000352886 DEFA6Q01524 100 aa17.75■□□□□ 0.43
SHMT1-202ENST00000352886 MOB3BQ86TA1 216 aa17.75■□□□□ 0.43
SHMT1-202ENST00000352886 ZNF114Q8NC26 417 aa17.75■□□□□ 0.43
SHMT1-202ENST00000352886 OR2T10Q8NGZ9 312 aa17.75■□□□□ 0.43
SHMT1-202ENST00000352886 YTHDF2Q9Y5A9 579 aaKnown RBP17.75■□□□□ 0.43
SHMT1-202ENST00000352886 FNDC10F2Z333 226 aa17.74■□□□□ 0.43
SHMT1-202ENST00000352886 SRP14P37108 136 aaKnown RBP17.74■□□□□ 0.43
SHMT1-202ENST00000352886 REG1BP48304 166 aa17.74■□□□□ 0.43
SHMT1-202ENST00000352886 PRR30Q53SZ7 412 aaPredicted RBP17.74■□□□□ 0.43
SHMT1-202ENST00000352886 HARBI1Q96MB7 349 aa17.74■□□□□ 0.43
SHMT1-202ENST00000352886 ZNF835Q9Y2P0 537 aa17.74■□□□□ 0.43
SHMT1-202ENST00000352886 KALRNO60229 2985 aa17.74■□□□□ 0.43
SHMT1-202ENST00000352886 TRBV20OR9-2A0A075B6H5 130 aa17.74■□□□□ 0.43
SHMT1-202ENST00000352886 GGCTO75223 188 aaKnown RBP17.74■□□□□ 0.43
SHMT1-202ENST00000352886 FOXH1O75593 365 aa17.74■□□□□ 0.43
SHMT1-202ENST00000352886 APOA2P02652 100 aa17.74■□□□□ 0.43
SHMT1-202ENST00000352886 C1QTNF9P0C862 333 aa17.74■□□□□ 0.43
SHMT1-202ENST00000352886 LYPD2Q6UXB3 125 aa17.74■□□□□ 0.43
SHMT1-202ENST00000352886 OSR1Q8TAX0 266 aaPredicted RBP17.74■□□□□ 0.43
SHMT1-202ENST00000352886 TMEM106BQ9NUM4 274 aa17.74■□□□□ 0.43
SHMT1-202ENST00000352886 FKBP11Q9NYL4 201 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms