RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 GAR1Q9NY12 217 aaKnown RBP4.93□□□□□ -1.62
CLCN3-201ENST00000347613 MRPL36Q9P0J6 103 aaKnown RBP4.93□□□□□ -1.62
CLCN3-201ENST00000347613 NAT8Q9UHE5 227 aa4.93□□□□□ -1.62
CLCN3-201ENST00000347613 TCF19Q9Y242 345 aa4.93□□□□□ -1.62
CLCN3-201ENST00000347613 SLC17A3O00476 420 aa4.93□□□□□ -1.62
CLCN3-201ENST00000347613 IFNA10P01566 189 aa4.93□□□□□ -1.62
CLCN3-201ENST00000347613 THBDP07204 575 aa4.93□□□□□ -1.62
CLCN3-201ENST00000347613 GPX4P36969 197 aaPredicted RBP4.93□□□□□ -1.62
CLCN3-201ENST00000347613 GALR1P47211 349 aa4.93□□□□□ -1.62
CLCN3-201ENST00000347613 CDC34P49427 236 aaPredicted RBP4.93□□□□□ -1.62
CLCN3-201ENST00000347613 PAX5Q02548 391 aa4.93□□□□□ -1.62
CLCN3-201ENST00000347613 OR5I1Q13606 314 aa4.93□□□□□ -1.62
CLCN3-201ENST00000347613 PMS2P11Q13670 270 aa4.93□□□□□ -1.62
CLCN3-201ENST00000347613 ADIPOQQ15848 244 aa4.93□□□□□ -1.62
CLCN3-201ENST00000347613 STUMQ69YW2 141 aa4.93□□□□□ -1.62
CLCN3-201ENST00000347613 OCC1Q8TAD7 63 aa4.93□□□□□ -1.62
CLCN3-201ENST00000347613 SARAFQ96BY9 339 aa4.93□□□□□ -1.62
CLCN3-201ENST00000347613 FUT9Q9Y231 359 aa4.93□□□□□ -1.62
CLCN3-201ENST00000347613 RNF114Q9Y508 228 aa4.93□□□□□ -1.62
CLCN3-201ENST00000347613 RNF212BA8MTL3 300 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 SPINT2O43291 252 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 HPRT1P00492 218 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 IL6RP08887 468 aaPredicted RBP4.92□□□□□ -1.62
CLCN3-201ENST00000347613 CATR1Q13166 79 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 MRGPRG-AS1Q2M3A8 158 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 C10orf55Q5SWW7 151 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 CST9LP1Q5W188 147 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 MIR17HGQ75NE6 70 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 LYG1Q8N1E2 194 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 PINX1Q96BK5 328 aaKnown RBP4.92□□□□□ -1.62
CLCN3-201ENST00000347613 IMMP2LQ96T52 175 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 PXMP4Q9Y6I8 212 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 SPTBN4Q9H254 2564 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 AKAP9Q99996 3911 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 TRAV5A0A0B4J249 113 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 ZNF891A8MT65 544 aaPredicted RBP4.92□□□□□ -1.62
CLCN3-201ENST00000347613 MGST3O14880 152 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 ACTL6BO94805 426 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 GZMBP10144 247 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 S100PP25815 95 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 RPL15P61313 204 aaKnown RBP4.92□□□□□ -1.62
CLCN3-201ENST00000347613 EFNB3Q15768 340 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 MSMO1Q15800 293 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 C1orf87Q8N0U7 546 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 OR10A7Q8NGE5 316 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 FAM222BQ8WU58 562 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 UNKLQ9H9P5 680 aaKnown RBP4.92□□□□□ -1.62
CLCN3-201ENST00000347613 HEYLQ9NQ87 328 aaPredicted RBP4.92□□□□□ -1.62
CLCN3-201ENST00000347613 TPSG1Q9NRR2 321 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 TMEM14BQ9NUH8 114 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.92□□□□□ -1.62
CLCN3-201ENST00000347613 A0A0G2JNJ9 132 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 KBTBD11-OT1A0A1B0GTJ5 212 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 DPRXA6NFQ7 191 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 ZNF729A6NN14 1252 aaPredicted RBP4.92□□□□□ -1.62
CLCN3-201ENST00000347613 B4DEV8 164 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 ADH4P08319 380 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 IL3RAP26951 378 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 TIMP3P35625 211 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 CFHR2P36980 270 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 PSMB3P49720 205 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 TDRG1Q3Y452 100 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 PDLIM3Q53GG5 364 aaPredicted RBP4.92□□□□□ -1.62
CLCN3-201ENST00000347613 FAM78BQ5VT40 261 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 DMRTC2Q8IXT2 367 aaPredicted RBP4.92□□□□□ -1.62
CLCN3-201ENST00000347613 Q8NA96 180 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 FAM216AQ8WUB2 273 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 C14orf144Q96I85 54 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 LINC00479Q96M42 142 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 ACTR3CQ9C0K3 210 aaPredicted RBP4.92□□□□□ -1.62
CLCN3-201ENST00000347613 Q9UFV3 132 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 JPT1Q9UK76 154 aa4.92□□□□□ -1.62
CLCN3-201ENST00000347613 C15orf61A6NNL5 157 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 A8MXE2 369 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 OR4A8P0C604 315 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 STAG3L2P0CL84 134 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 STAG3L3P0CL85 134 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 GLRXP35754 106 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 KLF3P57682 345 aaPredicted RBP4.91□□□□□ -1.62
CLCN3-201ENST00000347613 S100A12P80511 92 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 PNRC1Q12796 327 aaPredicted RBP4.91□□□□□ -1.62
CLCN3-201ENST00000347613 FBLN7Q53RD9 439 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 STPG3Q8N7X2 389 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 OR4A16Q8NH70 328 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 OR9G1Q8NH87 305 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 OR2T6Q8NHC8 308 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 PACRGQ96M98 296 aaPredicted RBP4.91□□□□□ -1.62
CLCN3-201ENST00000347613 HINT2Q9BX68 163 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 SRD5A3Q9H8P0 318 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 CHD8Q9HCK8 2581 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 ABCA4P78363 2273 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 GRIFINA4D1Z8 144 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 TMPRSS3P57727 454 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 SPCS3P61009 180 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 ACTL10Q5JWF8 245 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 TIMM23BQ5SRD1 257 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 Q6ZS92 163 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 TMEM144Q7Z5S9 345 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 ZNF664Q8N3J9 261 aa4.91□□□□□ -1.62
CLCN3-201ENST00000347613 OR13D1Q8NGV5 346 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms