RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 C1QL1O75973 258 aa7.52□□□□□ -1.2
ATG4A-202ENST00000345734 SEC11BP0C7V7 166 aa7.52□□□□□ -1.2
ATG4A-202ENST00000345734 CT45A6P0DMU7 189 aa7.52□□□□□ -1.2
ATG4A-202ENST00000345734 CT45A5P0DMU8 189 aa7.52□□□□□ -1.2
ATG4A-202ENST00000345734 CT45A7P0DMV0 189 aa7.52□□□□□ -1.2
ATG4A-202ENST00000345734 ATP6V0CP27449 155 aa7.52□□□□□ -1.2
ATG4A-202ENST00000345734 PLA2G5P39877 138 aa7.52□□□□□ -1.2
ATG4A-202ENST00000345734 RBX1P62877 108 aa7.52□□□□□ -1.2
ATG4A-202ENST00000345734 ZNF266Q14584 549 aa7.52□□□□□ -1.2
ATG4A-202ENST00000345734 HAGHQ16775 308 aa7.52□□□□□ -1.2
ATG4A-202ENST00000345734 Q6ZRG5 221 aa7.52□□□□□ -1.2
ATG4A-202ENST00000345734 SAT2Q96F10 170 aaPredicted RBP7.52□□□□□ -1.2
ATG4A-202ENST00000345734 TMEM208Q9BTX3 173 aa7.52□□□□□ -1.2
ATG4A-202ENST00000345734 RAB1BQ9H0U4 201 aa7.52□□□□□ -1.2
ATG4A-202ENST00000345734 USP9XQ93008 2570 aaPredicted RBP7.52□□□□□ -1.21
ATG4A-202ENST00000345734 MYO18BQ8IUG5 2567 aa7.52□□□□□ -1.21
ATG4A-202ENST00000345734 SEC14L6B5MCN3 397 aa7.52□□□□□ -1.21
ATG4A-202ENST00000345734 DANCRP0C864 163 aa7.52□□□□□ -1.21
ATG4A-202ENST00000345734 NQO2P16083 231 aa7.52□□□□□ -1.21
ATG4A-202ENST00000345734 KIR2DS2P43631 304 aa7.52□□□□□ -1.21
ATG4A-202ENST00000345734 THBS3P49746 956 aa7.52□□□□□ -1.21
ATG4A-202ENST00000345734 RPS16P62249 146 aaKnown RBP7.52□□□□□ -1.21
ATG4A-202ENST00000345734 RUNX1Q01196 453 aa7.52□□□□□ -1.21
ATG4A-202ENST00000345734 AKR1C1Q04828 323 aa7.52□□□□□ -1.21
ATG4A-202ENST00000345734 TMEM155Q4W5P6 130 aa7.52□□□□□ -1.21
ATG4A-202ENST00000345734 ZNF841Q6ZN19 808 aa7.52□□□□□ -1.21
ATG4A-202ENST00000345734 TMEM182Q6ZP80 229 aaPredicted RBP7.52□□□□□ -1.21
ATG4A-202ENST00000345734 OR4C12Q96R67 309 aa7.52□□□□□ -1.21
ATG4A-202ENST00000345734 ATP5SQ99766 215 aa7.52□□□□□ -1.21
ATG4A-202ENST00000345734 SCO2A0A1W2PP80 73 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 A8MWP6 167 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 NPBWR1P48145 328 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 DLX1P56177 255 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 TAS2R30P59541 319 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 PRB3Q04118 309 aaPredicted RBP7.51□□□□□ -1.21
ATG4A-202ENST00000345734 OR2G3Q8NGZ4 309 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 OR4S2Q8NH73 311 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 SEPSECSQ9HD40 501 aaKnown RBP7.51□□□□□ -1.21
ATG4A-202ENST00000345734 MMP26Q9NRE1 261 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 TMEM140Q9NV12 185 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 CACFD1Q9UGQ2 172 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 MED13LQ71F56 2210 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 SVEP1Q4LDE5 3571 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 CEBPZOSA8MTT3 80 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 AGPAT2O15120 278 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 REG1BP48304 166 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 ERVK-16P61578 105 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 DIAPH2-AS1Q14236 149 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 CRYBG3Q68DQ2 2970 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 BTNL8Q6UX41 500 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 TMEM14EPQ6UXP3 125 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 ZNF833PQ6ZTB9 187 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 C11orf42Q8N5U0 333 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 ZNF525Q8N782 197 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 OR4A16Q8NH70 328 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 TNFRSF14Q92956 283 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 MRPL20Q9BYC9 149 aaKnown RBP7.51□□□□□ -1.21
ATG4A-202ENST00000345734 PARP11Q9NR21 331 aa7.51□□□□□ -1.21
ATG4A-202ENST00000345734 PRH1P02810 166 aa7.5□□□□□ -1.21
ATG4A-202ENST00000345734 IGKV1-16P04430 117 aa7.5□□□□□ -1.21
ATG4A-202ENST00000345734 OR8G2PQ6IF36 304 aa7.5□□□□□ -1.21
ATG4A-202ENST00000345734 IL34Q6ZMJ4 242 aa7.5□□□□□ -1.21
ATG4A-202ENST00000345734 DTX2Q86UW9 622 aa7.5□□□□□ -1.21
ATG4A-202ENST00000345734 OR10X1Q8NGY0 326 aa7.5□□□□□ -1.21
ATG4A-202ENST00000345734 ADTRPQ96IZ2 230 aa7.5□□□□□ -1.21
ATG4A-202ENST00000345734 TMEM231Q9H6L2 316 aa7.5□□□□□ -1.21
ATG4A-202ENST00000345734 UBTD1Q9HAC8 227 aa7.5□□□□□ -1.21
ATG4A-202ENST00000345734 WNK2Q9Y3S1 2297 aa7.5□□□□□ -1.21
ATG4A-202ENST00000345734 FAM90A9PA6NNJ1 464 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 SRRM4A7MD48 611 aaKnown RBP7.49□□□□□ -1.21
ATG4A-202ENST00000345734 J3QR06 171 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 M0R143 59 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 DFFBO76075 338 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 IGHV1-8P0DP01 117 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 FGF7P21781 194 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 CDKN1AP38936 164 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 CAMLGP49069 296 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 SLC38A11Q08AI6 406 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 ZNF616Q08AN1 781 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 PJVKQ0ZLH3 352 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 OR4A47Q6IF82 309 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 SLC35D1Q9NTN3 355 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 FAM96BQ9Y3D0 163 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 FBXO7Q9Y3I1 522 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 PLXNB1O43157 2135 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 DOPEY1Q5JWR5 2465 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 A0A1B0GV50 99 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 PMS2P5A8MQ11 134 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 NDUFS7O75251 213 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 FSTL3O95633 263 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 IFNA5P01569 189 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 MYOD1P15172 320 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 RAB5AP20339 215 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 MAS1LP35410 378 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 F2RL1P55085 397 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 HBG1P69891 147 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 HBG2P69892 147 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 GAMTQ14353 236 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 OR13D1Q8NGV5 346 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 LYPD6BQ8NI32 183 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms