RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 BAHCC1Q9P281 2608 aa10.55□□□□□ -0.72
CLK3-201ENST00000345005 FSTL3O95633 263 aa10.55□□□□□ -0.72
CLK3-201ENST00000345005 HRASP01112 189 aa10.55□□□□□ -0.72
CLK3-201ENST00000345005 TYMSP04818 313 aa10.55□□□□□ -0.72
CLK3-201ENST00000345005 CD99P14209 185 aa10.55□□□□□ -0.72
CLK3-201ENST00000345005 GALR1P47211 349 aa10.55□□□□□ -0.72
CLK3-201ENST00000345005 PCP4P48539 62 aa10.55□□□□□ -0.72
CLK3-201ENST00000345005 TMEM267Q0VDI3 215 aaPredicted RBP10.55□□□□□ -0.72
CLK3-201ENST00000345005 EIF4EBP1Q13541 118 aaPredicted RBP10.55□□□□□ -0.72
CLK3-201ENST00000345005 ZNF66Q6ZN08 573 aa10.55□□□□□ -0.72
CLK3-201ENST00000345005 OR51G1Q8NGK1 321 aa10.55□□□□□ -0.72
CLK3-201ENST00000345005 TMEM170AQ8WVE7 144 aa10.55□□□□□ -0.72
CLK3-201ENST00000345005 HSD17B10Q99714 261 aaKnown RBP10.55□□□□□ -0.72
CLK3-201ENST00000345005 RSG1Q9BU20 258 aa10.55□□□□□ -0.72
CLK3-201ENST00000345005 LINC00312Q9Y6C7 94 aa10.55□□□□□ -0.72
CLK3-201ENST00000345005 RAB7AP51149 207 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 ADIRFQ15847 76 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 ZNF585BQ52M93 769 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 PDZD11Q5EBL8 140 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 CIB3Q96Q77 187 aaPredicted RBP10.54□□□□□ -0.72
CLK3-201ENST00000345005 TXNDC17Q9BRA2 123 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 CHODLQ9H9P2 273 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 IDI2-AS1Q9NZ38 188 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 HELZ2Q9BYK8 2649 aaKnown RBP10.54□□□□□ -0.72
CLK3-201ENST00000345005 XKRY2A2RUG3 117 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 CLDN1O95832 211 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 GPR12P47775 334 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 SLC38A11Q08AI6 406 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 ZNF726P1Q15940 193 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 IQCJQ1A5X6 159 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 TMEM249Q2WGJ8 235 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 TMEM14EPQ6UXP3 125 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 C16orf82Q7Z2V1 217 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 OR2T10Q8NGZ9 312 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 OR4C12Q96R67 309 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 TMEM147Q9BVK8 224 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 GAL3ST2Q9H3Q3 398 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 RBKSQ9H477 322 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 GAB2Q9UQC2 676 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 GOLT1BQ9Y3E0 138 aa10.54□□□□□ -0.72
CLK3-201ENST00000345005 TENM4Q6N022 2769 aa10.53□□□□□ -0.72
CLK3-201ENST00000345005 C17orf112F2Z3M2 114 aa10.53□□□□□ -0.72
CLK3-201ENST00000345005 DLEU1O43261 78 aa10.53□□□□□ -0.72
CLK3-201ENST00000345005 AMBPP02760 352 aa10.53□□□□□ -0.72
CLK3-201ENST00000345005 GZMBP10144 247 aa10.53□□□□□ -0.72
CLK3-201ENST00000345005 COL8A2P25067 703 aa10.53□□□□□ -0.72
CLK3-201ENST00000345005 RPL31P62899 125 aaKnown RBP10.53□□□□□ -0.72
CLK3-201ENST00000345005 C11orf71Q6IPW1 123 aa10.53□□□□□ -0.72
CLK3-201ENST00000345005 LYPD2Q6UXB3 125 aa10.53□□□□□ -0.72
CLK3-201ENST00000345005 TCF23Q7RTU1 214 aa10.53□□□□□ -0.72
CLK3-201ENST00000345005 ZNF295-AS1Q8N0V1 137 aa10.53□□□□□ -0.72
CLK3-201ENST00000345005 ZNF709Q8N972 641 aa10.53□□□□□ -0.72
CLK3-201ENST00000345005 NEU4Q8WWR8 484 aaPredicted RBP10.53□□□□□ -0.72
CLK3-201ENST00000345005 C5orf30Q96GV9 206 aa10.53□□□□□ -0.72
CLK3-201ENST00000345005 SPOCK3Q9BQ16 436 aa10.53□□□□□ -0.72
CLK3-201ENST00000345005 LAMP3Q9UQV4 416 aa10.53□□□□□ -0.72
CLK3-201ENST00000345005 IGKV1-39P01597 117 aa10.52□□□□□ -0.73
CLK3-201ENST00000345005 IGKV1D-39P04432 117 aa10.52□□□□□ -0.73
CLK3-201ENST00000345005 RPL23P62829 140 aaKnown RBP10.52□□□□□ -0.73
CLK3-201ENST00000345005 RPL30P62888 115 aaKnown RBP10.52□□□□□ -0.73
CLK3-201ENST00000345005 BTNL3Q6UXE8 466 aa10.52□□□□□ -0.73
CLK3-201ENST00000345005 DTX2Q86UW9 622 aa10.52□□□□□ -0.73
CLK3-201ENST00000345005 FGFRL1Q8N441 504 aa10.52□□□□□ -0.73
CLK3-201ENST00000345005 RELNP78509 3460 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 A0A0G2JRQ6 117 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 H3BP45 60 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 PDE6DO43924 150 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 ZNF134P52741 427 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 ERVFC1-1P60608 527 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 MRPS11P82912 194 aaKnown RBP10.51□□□□□ -0.73
CLK3-201ENST00000345005 ACTL10Q5JWF8 245 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 SPANXN5Q5MJ07 72 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 CDPF1Q6NVV7 123 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 ZNF664Q8N3J9 261 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.51□□□□□ -0.73
CLK3-201ENST00000345005 H1FXQ92522 213 aaKnown RBP10.51□□□□□ -0.73
CLK3-201ENST00000345005 NEIL1Q96FI4 390 aaPredicted RBP10.51□□□□□ -0.73
CLK3-201ENST00000345005 HSPB7Q9UBY9 170 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 RPUSD1Q9UJJ7 312 aaKnown RBP10.51□□□□□ -0.73
CLK3-201ENST00000345005 LYNX1G3V0Z9 82 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 LYNX1P0DP58 116 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 IAPPP10997 89 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 FGF8P55075 233 aaPredicted RBP10.51□□□□□ -0.73
CLK3-201ENST00000345005 COTL1Q14019 142 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 CT45A1Q5HYN5 189 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 SAPCD1Q5SSQ6 148 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 TMEM200BQ69YZ2 307 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 Q6ZRM9 215 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 CT45A3Q8NHU0 189 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 ZNF714Q96N38 554 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 IFI27L2Q9H2X8 130 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 PRO1933Q9H354 126 aa10.51□□□□□ -0.73
CLK3-201ENST00000345005 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.51□□□□□ -0.73
CLK3-201ENST00000345005 C17orf98A8MV24 154 aa10.5□□□□□ -0.73
CLK3-201ENST00000345005 RAB29O14966 203 aa10.5□□□□□ -0.73
CLK3-201ENST00000345005 FCN3O75636 299 aa10.5□□□□□ -0.73
CLK3-201ENST00000345005 NXPH3O95157 252 aa10.5□□□□□ -0.73
CLK3-201ENST00000345005 IGKV1-5P01602 117 aa10.5□□□□□ -0.73
CLK3-201ENST00000345005 IGFBP2P18065 325 aa10.5□□□□□ -0.73
CLK3-201ENST00000345005 DUTP33316 252 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms