RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 SSX7Q7RTT5 188 aa13.65□□□□□ -0.22
RDX-201ENST00000343115 SEBOXQ9HB31 216 aaPredicted RBP13.65□□□□□ -0.22
RDX-201ENST00000343115 SRP14P37108 136 aaKnown RBP13.65□□□□□ -0.22
RDX-201ENST00000343115 NUBP1P53384 320 aa13.65□□□□□ -0.22
RDX-201ENST00000343115 PAX9P55771 341 aa13.65□□□□□ -0.22
RDX-201ENST00000343115 MORN2Q502X0 79 aa13.65□□□□□ -0.22
RDX-201ENST00000343115 MED12LQ86YW9 2145 aa13.65□□□□□ -0.22
RDX-201ENST00000343115 MRPL18Q9H0U6 180 aaKnown RBP13.65□□□□□ -0.22
RDX-201ENST00000343115 TMEM183BQ1AE95 376 aa13.65□□□□□ -0.22
RDX-201ENST00000343115 S100A7AQ86SG5 101 aa13.65□□□□□ -0.22
RDX-201ENST00000343115 SSC4DQ8WTU2 575 aa13.65□□□□□ -0.22
RDX-201ENST00000343115 IGHV1-18A0A0C4DH31 117 aa13.64□□□□□ -0.23
RDX-201ENST00000343115 DUTP33316 252 aaKnown RBP13.64□□□□□ -0.23
RDX-201ENST00000343115 HNRNPA3P51991 378 aaKnown RBP13.64□□□□□ -0.23
RDX-201ENST00000343115 COQ2Q96H96 371 aa13.64□□□□□ -0.23
RDX-201ENST00000343115 DERL1Q9BUN8 251 aa13.64□□□□□ -0.23
RDX-201ENST00000343115 SZT2Q5T011 3432 aa13.64□□□□□ -0.23
RDX-201ENST00000343115 TRAV3A0A0B4J244 114 aa13.64□□□□□ -0.23
RDX-201ENST00000343115 SS18L1O75177 396 aaPredicted RBP13.64□□□□□ -0.23
RDX-201ENST00000343115 IBA57Q5T440 356 aaKnown RBP13.64□□□□□ -0.23
RDX-201ENST00000343115 MBD3L1Q8WWY6 194 aa13.64□□□□□ -0.23
RDX-201ENST00000343115 SOD3P08294 240 aa13.64□□□□□ -0.23
RDX-201ENST00000343115 PRRX1P54821 245 aa13.64□□□□□ -0.23
RDX-201ENST00000343115 MYOD1P15172 320 aa13.64□□□□□ -0.23
RDX-201ENST00000343115 WDR73Q6P4I2 378 aa13.64□□□□□ -0.23
RDX-201ENST00000343115 TMEM183AQ8IXX5 376 aa13.64□□□□□ -0.23
RDX-201ENST00000343115 MMD2Q8IY49 270 aa13.64□□□□□ -0.23
RDX-201ENST00000343115 MDS2Q8NDY4 140 aa13.64□□□□□ -0.23
RDX-201ENST00000343115 CBLN4Q9NTU7 201 aa13.64□□□□□ -0.23
RDX-201ENST00000343115 Q56UQ5 140 aa13.63□□□□□ -0.23
RDX-201ENST00000343115 CENPWQ5EE01 88 aa13.63□□□□□ -0.23
RDX-201ENST00000343115 TIMM23BQ5SRD1 257 aa13.63□□□□□ -0.23
RDX-201ENST00000343115 MIR17HGQ75NE6 70 aa13.63□□□□□ -0.23
RDX-201ENST00000343115 RNF138Q8WVD3 245 aa13.63□□□□□ -0.23
RDX-201ENST00000343115 TMSB15BA0A087X1C1 80 aa13.63□□□□□ -0.23
RDX-201ENST00000343115 A0A1B0GV90 55 aa13.63□□□□□ -0.23
RDX-201ENST00000343115 M0R143 59 aa13.63□□□□□ -0.23
RDX-201ENST00000343115 HIST1H1BP16401 226 aaKnown RBP13.63□□□□□ -0.23
RDX-201ENST00000343115 FAM222BQ8WU58 562 aa13.63□□□□□ -0.23
RDX-201ENST00000343115 CHRDL1Q9BU40 450 aa13.63□□□□□ -0.23
RDX-201ENST00000343115 HILPDAQ9Y5L2 63 aa13.63□□□□□ -0.23
RDX-201ENST00000343115 IGF2RP11717 2491 aa13.63□□□□□ -0.23
RDX-201ENST00000343115 SAA2-SAA4A0A096LPE2 208 aa13.63□□□□□ -0.23
RDX-201ENST00000343115 IGKV1-39P01597 117 aa13.63□□□□□ -0.23
RDX-201ENST00000343115 IGKV1D-39P04432 117 aa13.63□□□□□ -0.23
RDX-201ENST00000343115 SAA2P0DJI9 122 aaPredicted RBP13.63□□□□□ -0.23
RDX-201ENST00000343115 MMDQ15546 238 aa13.63□□□□□ -0.23
RDX-201ENST00000343115 ANKHD1Q8IWZ3 2542 aaKnown RBP13.63□□□□□ -0.23
RDX-201ENST00000343115 MOSP00540 346 aa13.62□□□□□ -0.23
RDX-201ENST00000343115 FOLR2P14207 255 aa13.62□□□□□ -0.23
RDX-201ENST00000343115 COL8A1P27658 744 aa13.62□□□□□ -0.23
RDX-201ENST00000343115 PYY3Q5JQD4 70 aa13.62□□□□□ -0.23
RDX-201ENST00000343115 ETFRF1Q6IPR1 90 aa13.62□□□□□ -0.23
RDX-201ENST00000343115 OR2T6Q8NHC8 308 aa13.62□□□□□ -0.23
RDX-201ENST00000343115 FGF23Q9GZV9 251 aaPredicted RBP13.62□□□□□ -0.23
RDX-201ENST00000343115 PGPA6NDG6 321 aa13.62□□□□□ -0.23
RDX-201ENST00000343115 PRB4P10163 310 aaPredicted RBP13.62□□□□□ -0.23
RDX-201ENST00000343115 CD177Q8N6Q3 437 aa13.62□□□□□ -0.23
RDX-201ENST00000343115 STARD4Q96DR4 205 aa13.62□□□□□ -0.23
RDX-201ENST00000343115 TLN1Q9Y490 2541 aaKnown RBP13.62□□□□□ -0.23
RDX-201ENST00000343115 WDR86Q86TI4 376 aa13.62□□□□□ -0.23
RDX-201ENST00000343115 KBTBD11-OT1A0A1B0GTJ5 212 aa13.62□□□□□ -0.23
RDX-201ENST00000343115 M0R2Z0 102 aa13.62□□□□□ -0.23
RDX-201ENST00000343115 RPL27AP46776 148 aaKnown RBP13.62□□□□□ -0.23
RDX-201ENST00000343115 MRPL37Q9BZE1 423 aaKnown RBP13.62□□□□□ -0.23
RDX-201ENST00000343115 CDX4O14627 284 aaPredicted RBP13.61□□□□□ -0.23
RDX-201ENST00000343115 TCAPO15273 167 aa13.61□□□□□ -0.23
RDX-201ENST00000343115 C8orf88P0DMB2 117 aa13.61□□□□□ -0.23
RDX-201ENST00000343115 KRTCAP3Q53RY4 240 aa13.61□□□□□ -0.23
RDX-201ENST00000343115 DNAJC4Q9NNZ3 241 aa13.61□□□□□ -0.23
RDX-201ENST00000343115 HTR1DP28221 377 aa13.61□□□□□ -0.23
RDX-201ENST00000343115 TMEM14EPQ6UXP3 125 aa13.61□□□□□ -0.23
RDX-201ENST00000343115 NAGKQ9UJ70 344 aa13.61□□□□□ -0.23
RDX-201ENST00000343115 FAM208BQ5VWN6 2430 aa13.61□□□□□ -0.23
RDX-201ENST00000343115 GNB2P62879 340 aa13.61□□□□□ -0.23
RDX-201ENST00000343115 FAM90A2PQ658T7 463 aa13.61□□□□□ -0.23
RDX-201ENST00000343115 Q6ZN92 141 aa13.61□□□□□ -0.23
RDX-201ENST00000343115 C1orf174Q8IYL3 243 aa13.61□□□□□ -0.23
RDX-201ENST00000343115 OR4F17Q8NGA8 305 aa13.61□□□□□ -0.23
RDX-201ENST00000343115 PRO3102Q9H379 93 aa13.61□□□□□ -0.23
RDX-201ENST00000343115 WDR83OSQ9Y284 106 aa13.61□□□□□ -0.23
RDX-201ENST00000343115 MUC22E2RYF6 1773 aaPredicted RBP13.61□□□□□ -0.23
RDX-201ENST00000343115 DIRC3C9JPN6 131 aa13.6□□□□□ -0.23
RDX-201ENST00000343115 CD40P25942 277 aa13.6□□□□□ -0.23
RDX-201ENST00000343115 SRSF7Q16629 238 aaKnown RBP eCLIP13.6□□□□□ -0.235e-12■■■■■ 38.5
RDX-201ENST00000343115 TNFRSF19Q9NS68 423 aa13.6□□□□□ -0.23
RDX-201ENST00000343115 RNF115Q9Y4L5 304 aa13.6□□□□□ -0.23
RDX-201ENST00000343115 P01737 135 aa13.6□□□□□ -0.23
RDX-201ENST00000343115 APCSP02743 223 aa13.6□□□□□ -0.23
RDX-201ENST00000343115 CEACAM1P13688 526 aa13.6□□□□□ -0.23
RDX-201ENST00000343115 AMMECR1Q9Y4X0 333 aaPredicted RBP13.6□□□□□ -0.23
RDX-201ENST00000343115 Q6ZS49 121 aa13.6□□□□□ -0.23
RDX-201ENST00000343115 C1QL4Q86Z23 238 aa13.6□□□□□ -0.23
RDX-201ENST00000343115 VENTXO95231 258 aa13.6□□□□□ -0.23
RDX-201ENST00000343115 SRIP30626 198 aa13.6□□□□□ -0.23
RDX-201ENST00000343115 ATOH7Q8N100 152 aa13.6□□□□□ -0.23
RDX-201ENST00000343115 KLHDC1Q8N7A1 406 aa13.6□□□□□ -0.23
RDX-201ENST00000343115 ZNF729A6NN14 1252 aaPredicted RBP13.59□□□□□ -0.23
RDX-201ENST00000343115 ZNF25P17030 456 aaPredicted RBP13.59□□□□□ -0.23
RDX-201ENST00000343115 RASL11BQ9BPW5 248 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms