RNA–Protein interactions for RNA: ENST00000342343.8

PDE8B-204, Transcript of phosphodiesterase 8B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE8B, Length 2,677 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-204ENST00000342343 VAMP8Q9BV40 100 aa12.98□□□□□ -0.33
PDE8B-204ENST00000342343 MRPL18Q9H0U6 180 aaKnown RBP12.98□□□□□ -0.33
PDE8B-204ENST00000342343 TRAV9-1A0A075B6T8 112 aa12.98□□□□□ -0.33
PDE8B-204ENST00000342343 SPRY3O43610 288 aa12.98□□□□□ -0.33
PDE8B-204ENST00000342343 LINC00310P59036 64 aa12.98□□□□□ -0.33
PDE8B-204ENST00000342343 MOGAT3Q86VF5 341 aa12.98□□□□□ -0.33
PDE8B-204ENST00000342343 BAGE3Q86Y29 109 aa12.98□□□□□ -0.33
PDE8B-204ENST00000342343 BAGE2Q86Y30 109 aa12.98□□□□□ -0.33
PDE8B-204ENST00000342343 SCO2A0A1W2PP80 73 aa12.97□□□□□ -0.33
PDE8B-204ENST00000342343 ZNF891A8MT65 544 aaPredicted RBP12.97□□□□□ -0.33
PDE8B-204ENST00000342343 CXorf1O96002 111 aa12.97□□□□□ -0.33
PDE8B-204ENST00000342343 OPRK1P41145 380 aa12.97□□□□□ -0.33
PDE8B-204ENST00000342343 PDLIM3Q53GG5 364 aaPredicted RBP12.97□□□□□ -0.33
PDE8B-204ENST00000342343 DUX4L9Q6RFH8 374 aaPredicted RBP12.97□□□□□ -0.33
PDE8B-204ENST00000342343 SAMD10Q9BYL1 202 aa12.97□□□□□ -0.33
PDE8B-204ENST00000342343 IL36BQ9NZH7 164 aa12.97□□□□□ -0.33
PDE8B-204ENST00000342343 SRRM5B3KS81 715 aa12.97□□□□□ -0.33
PDE8B-204ENST00000342343 KALRNO60229 2985 aa12.97□□□□□ -0.33
PDE8B-204ENST00000342343 STAG3L2P0CL84 134 aa12.97□□□□□ -0.33
PDE8B-204ENST00000342343 STAG3L3P0CL85 134 aa12.97□□□□□ -0.33
PDE8B-204ENST00000342343 ZNF134P52741 427 aa12.97□□□□□ -0.33
PDE8B-204ENST00000342343 VKORC1L1Q8N0U8 176 aa12.97□□□□□ -0.33
PDE8B-204ENST00000342343 LEAP2Q969E1 77 aa12.97□□□□□ -0.33
PDE8B-204ENST00000342343 APC2O95996 2303 aa12.97□□□□□ -0.33
PDE8B-204ENST00000342343 MUC6Q6W4X9 2439 aa12.97□□□□□ -0.33
PDE8B-204ENST00000342343 FCN1O00602 326 aa12.96□□□□□ -0.33
PDE8B-204ENST00000342343 LINC00614P0C842 121 aa12.96□□□□□ -0.33
PDE8B-204ENST00000342343 CDKN1AP38936 164 aa12.96□□□□□ -0.33
PDE8B-204ENST00000342343 RPP30P78346 268 aaKnown RBP12.96□□□□□ -0.33
PDE8B-204ENST00000342343 RPL39P5Q59GN2 51 aa12.96□□□□□ -0.33
PDE8B-204ENST00000342343 LPAR2Q9HBW0 351 aa12.96□□□□□ -0.33
PDE8B-204ENST00000342343 GNG12Q9UBI6 72 aa12.96□□□□□ -0.33
PDE8B-204ENST00000342343 SPINT2O43291 252 aa12.96□□□□□ -0.33
PDE8B-204ENST00000342343 OR9G9P0C7N8 305 aa12.96□□□□□ -0.33
PDE8B-204ENST00000342343 BATFQ16520 125 aa12.96□□□□□ -0.33
PDE8B-204ENST00000342343 TREML4Q6UXN2 200 aa12.96□□□□□ -0.33
PDE8B-204ENST00000342343 C1orf229Q6ZS94 237 aaPredicted RBP12.96□□□□□ -0.33
PDE8B-204ENST00000342343 CBY1Q9Y3M2 126 aa12.96□□□□□ -0.33
PDE8B-204ENST00000342343 TET2Q6N021 2002 aaPredicted RBP12.96□□□□□ -0.34
PDE8B-204ENST00000342343 A8MXE2 369 aa12.96□□□□□ -0.34
PDE8B-204ENST00000342343 SLC17A3O00476 420 aa12.96□□□□□ -0.34
PDE8B-204ENST00000342343 FCGR3BO75015 233 aa12.96□□□□□ -0.34
PDE8B-204ENST00000342343 ARSJQ5FYB0 599 aaPredicted RBP12.96□□□□□ -0.34
PDE8B-204ENST00000342343 HSD17B10Q99714 261 aaKnown RBP12.96□□□□□ -0.34
PDE8B-204ENST00000342343 FAM27E3Q08E93 113 aa12.95□□□□□ -0.34
PDE8B-204ENST00000342343 Q0VG73 95 aa12.95□□□□□ -0.34
PDE8B-204ENST00000342343 MORN2Q502X0 79 aa12.95□□□□□ -0.34
PDE8B-204ENST00000342343 Q8TCH9 128 aa12.95□□□□□ -0.34
PDE8B-204ENST00000342343 ITLN1Q8WWA0 313 aa12.95□□□□□ -0.34
PDE8B-204ENST00000342343 DUTP33316 252 aaKnown RBP12.95□□□□□ -0.34
PDE8B-204ENST00000342343 GPR12P47775 334 aa12.95□□□□□ -0.34
PDE8B-204ENST00000342343 RPL31P62899 125 aaKnown RBP12.95□□□□□ -0.34
PDE8B-204ENST00000342343 HLA-DRB5Q30154 266 aa12.95□□□□□ -0.34
PDE8B-204ENST00000342343 OR1L6Q8NGR2 347 aa12.95□□□□□ -0.34
PDE8B-204ENST00000342343 TUBG2Q9NRH3 451 aa12.95□□□□□ -0.34
PDE8B-204ENST00000342343 PKDREJQ9NTG1 2253 aa12.94□□□□□ -0.34
PDE8B-204ENST00000342343 YLPM1P49750 1951 aaKnown RBP12.94□□□□□ -0.34
PDE8B-204ENST00000342343 IER3P46695 156 aa12.94□□□□□ -0.34
PDE8B-204ENST00000342343 KRTCAP3Q53RY4 240 aa12.94□□□□□ -0.34
PDE8B-204ENST00000342343 MIC13Q5XKP0 118 aa12.94□□□□□ -0.34
PDE8B-204ENST00000342343 RBMXL3Q8N7X1 1067 aaKnown RBP12.94□□□□□ -0.34
PDE8B-204ENST00000342343 SIGLECL1Q8N7X8 197 aa12.94□□□□□ -0.34
PDE8B-204ENST00000342343 CUL9Q8IWT3 2517 aa12.94□□□□□ -0.34
PDE8B-204ENST00000342343 K7EN84 100 aa12.94□□□□□ -0.34
PDE8B-204ENST00000342343 RRHO14718 337 aa12.94□□□□□ -0.34
PDE8B-204ENST00000342343 LGALS4P56470 323 aa12.94□□□□□ -0.34
PDE8B-204ENST00000342343 HTD2P86397 168 aa12.94□□□□□ -0.34
PDE8B-204ENST00000342343 OR5I1Q13606 314 aa12.94□□□□□ -0.34
PDE8B-204ENST00000342343 MGST2Q99735 147 aa12.94□□□□□ -0.34
PDE8B-204ENST00000342343 YTHDF2Q9Y5A9 579 aaKnown RBP12.94□□□□□ -0.34
PDE8B-204ENST00000342343 TRAV3A0A0B4J244 114 aa12.93□□□□□ -0.34
PDE8B-204ENST00000342343 SNURFLB1AK76 121 aa12.93□□□□□ -0.34
PDE8B-204ENST00000342343 M0R1X1 148 aa12.93□□□□□ -0.34
PDE8B-204ENST00000342343 KLF3P57682 345 aaPredicted RBP12.93□□□□□ -0.34
PDE8B-204ENST00000342343 LOXL3P58215 753 aa12.93□□□□□ -0.34
PDE8B-204ENST00000342343 TCF15Q12870 199 aa12.93□□□□□ -0.34
PDE8B-204ENST00000342343 TIMM23BQ5SRD1 257 aa12.93□□□□□ -0.34
PDE8B-204ENST00000342343 COL5A1-AS1Q5SY13 56 aa12.93□□□□□ -0.34
PDE8B-204ENST00000342343 IGF2-ASQ6U949 168 aa12.93□□□□□ -0.34
PDE8B-204ENST00000342343 Q6ZS92 163 aa12.93□□□□□ -0.34
PDE8B-204ENST00000342343 FAM90A1Q86YD7 464 aa12.93□□□□□ -0.34
PDE8B-204ENST00000342343 LRFN3Q9BTN0 628 aa12.93□□□□□ -0.34
PDE8B-204ENST00000342343 GGTLC1Q9BX51 225 aa12.93□□□□□ -0.34
PDE8B-204ENST00000342343 MS4A5Q9H3V2 200 aa12.93□□□□□ -0.34
PDE8B-204ENST00000342343 HEYLQ9NQ87 328 aaPredicted RBP12.93□□□□□ -0.34
PDE8B-204ENST00000342343 DSCAML1Q8TD84 2053 aa12.93□□□□□ -0.34
PDE8B-204ENST00000342343 CEP295Q9C0D2 2601 aa12.93□□□□□ -0.34
PDE8B-204ENST00000342343 ADH4P08319 380 aa12.93□□□□□ -0.34
PDE8B-204ENST00000342343 IL6RP08887 468 aaPredicted RBP12.93□□□□□ -0.34
PDE8B-204ENST00000342343 IGFL3Q6UXB1 125 aa12.93□□□□□ -0.34
PDE8B-204ENST00000342343 DEFB108BQ8NET1 73 aa12.93□□□□□ -0.34
PDE8B-204ENST00000342343 F2Z2F3 143 aa12.92□□□□□ -0.34
PDE8B-204ENST00000342343 GPX1P07203 203 aa12.92□□□□□ -0.34
PDE8B-204ENST00000342343 COMPP49747 757 aaPredicted RBP12.92□□□□□ -0.34
PDE8B-204ENST00000342343 TMPRSS3P57727 454 aa12.92□□□□□ -0.34
PDE8B-204ENST00000342343 MRPS11P82912 194 aaKnown RBP12.92□□□□□ -0.34
PDE8B-204ENST00000342343 RPEL1Q2QD12 228 aa12.92□□□□□ -0.34
PDE8B-204ENST00000342343 MMD2Q8IY49 270 aa12.92□□□□□ -0.34
PDE8B-204ENST00000342343 OR4A16Q8NH70 328 aa12.92□□□□□ -0.34
PDE8B-204ENST00000342343 TRBV9A0A0B4J1U6 114 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms