RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 MSGN1A6NI15 193 aa16.32■□□□□ 0.2
SEMA6C-201ENST00000341697 ERVH48-1M5A8F1 160 aa16.32■□□□□ 0.2
SEMA6C-201ENST00000341697 UPK2O00526 184 aa16.32■□□□□ 0.2
SEMA6C-201ENST00000341697 DLX6P56179 175 aa16.32■□□□□ 0.2
SEMA6C-201ENST00000341697 ZNF324BQ6AW86 544 aaPredicted RBP16.32■□□□□ 0.2
SEMA6C-201ENST00000341697 M0QZK8 103 aa16.32■□□□□ 0.2
SEMA6C-201ENST00000341697 RBFOX2O43251 390 aaKnown RBP eCLIP16.32■□□□□ 0.2
SEMA6C-201ENST00000341697 OR5AL1P0C617 328 aa16.32■□□□□ 0.2
SEMA6C-201ENST00000341697 SRSF7Q16629 238 aaKnown RBP eCLIP16.32■□□□□ 0.2
SEMA6C-201ENST00000341697 COLCA1Q6ZS62 124 aa16.32■□□□□ 0.2
SEMA6C-201ENST00000341697 OR4B1Q8NGF8 309 aa16.32■□□□□ 0.2
SEMA6C-201ENST00000341697 MAS1LP35410 378 aa16.32■□□□□ 0.2
SEMA6C-201ENST00000341697 IL6RP08887 468 aaPredicted RBP16.32■□□□□ 0.2
SEMA6C-201ENST00000341697 IER3P46695 156 aa16.32■□□□□ 0.2
SEMA6C-201ENST00000341697 NPFFR1Q9GZQ6 430 aa16.32■□□□□ 0.2
SEMA6C-201ENST00000341697 OR4X2Q8NGF9 303 aa16.31■□□□□ 0.2
SEMA6C-201ENST00000341697 SGMS2Q8NHU3 365 aa16.31■□□□□ 0.2
SEMA6C-201ENST00000341697 RNASEH2CQ8TDP1 164 aaKnown RBP16.31■□□□□ 0.2
SEMA6C-201ENST00000341697 RPUSD1Q9UJJ7 312 aaKnown RBP16.31■□□□□ 0.2
SEMA6C-201ENST00000341697 CACNG8Q8WXS5 425 aa16.31■□□□□ 0.2
SEMA6C-201ENST00000341697 SNURFLB1AK76 121 aa16.31■□□□□ 0.2
SEMA6C-201ENST00000341697 SIAH2O43255 324 aa16.31■□□□□ 0.2
SEMA6C-201ENST00000341697 IGHV3-23P01764 117 aa16.31■□□□□ 0.2
SEMA6C-201ENST00000341697 SELLP14151 372 aa16.31■□□□□ 0.2
SEMA6C-201ENST00000341697 LINC00305Q7Z4B0 112 aa16.31■□□□□ 0.2
SEMA6C-201ENST00000341697 SLC25A33Q9BSK2 321 aa16.31■□□□□ 0.2
SEMA6C-201ENST00000341697 NPCDR1Q9BY65 106 aa16.31■□□□□ 0.2
SEMA6C-201ENST00000341697 IGKV1D-8A0A087WSZ0 117 aa16.3■□□□□ 0.2
SEMA6C-201ENST00000341697 ELOVL1Q9BW60 279 aa16.3■□□□□ 0.2
SEMA6C-201ENST00000341697 FOXA2Q9Y261 457 aaPredicted RBP16.3■□□□□ 0.2
SEMA6C-201ENST00000341697 ZFHX2Q9C0A1 2572 aaPredicted RBP16.3■□□□□ 0.2
SEMA6C-201ENST00000341697 AKAP6Q13023 2319 aa16.3■□□□□ 0.2
SEMA6C-201ENST00000341697 IBA57Q5T440 356 aaKnown RBP16.3■□□□□ 0.2
SEMA6C-201ENST00000341697 MPZP25189 248 aa16.3■□□□□ 0.2
SEMA6C-201ENST00000341697 SNRPEP62304 92 aaKnown RBP16.3■□□□□ 0.2
SEMA6C-201ENST00000341697 DUX5Q96PT3 197 aa16.3■□□□□ 0.2
SEMA6C-201ENST00000341697 S4R3C0 116 aa16.3■□□□□ 0.2
SEMA6C-201ENST00000341697 PSPNO60542 156 aa16.3■□□□□ 0.2
SEMA6C-201ENST00000341697 LILRA1O75019 489 aa16.3■□□□□ 0.2
SEMA6C-201ENST00000341697 DDB2Q92466 427 aa16.3■□□□□ 0.2
SEMA6C-201ENST00000341697 RAX2Q96IS3 184 aa16.3■□□□□ 0.2
SEMA6C-201ENST00000341697 DUTP33316 252 aaKnown RBP16.29■□□□□ 0.2
SEMA6C-201ENST00000341697 ADIPOQQ15848 244 aa16.29■□□□□ 0.2
SEMA6C-201ENST00000341697 WDR25Q64LD2 544 aaPredicted RBP16.29■□□□□ 0.2
SEMA6C-201ENST00000341697 TOMM20LQ6UXN7 152 aa16.29■□□□□ 0.2
SEMA6C-201ENST00000341697 WNT10AQ9GZT5 417 aa16.29■□□□□ 0.2
SEMA6C-201ENST00000341697 EIF3GO75821 320 aaKnown RBP eCLIP16.29■□□□□ 0.2
SEMA6C-201ENST00000341697 TDGF1P13385 188 aa16.29■□□□□ 0.2
SEMA6C-201ENST00000341697 PMS2P11Q13670 270 aa16.29■□□□□ 0.2
SEMA6C-201ENST00000341697 HEPN1Q6WQI6 88 aa16.29■□□□□ 0.2
SEMA6C-201ENST00000341697 OR10D4PQ8NGN7 298 aa16.29■□□□□ 0.2
SEMA6C-201ENST00000341697 C18orf12Q96KH6 178 aa16.29■□□□□ 0.2
SEMA6C-201ENST00000341697 CRIM1Q9NZV1 1036 aa16.29■□□□□ 0.2
SEMA6C-201ENST00000341697 MPTX1A8MV57 137 aa16.29■□□□□ 0.2
SEMA6C-201ENST00000341697 H3BTX0 84 aa16.29■□□□□ 0.2
SEMA6C-201ENST00000341697 MFAP2P55001 183 aa16.29■□□□□ 0.2
SEMA6C-201ENST00000341697 SNRPD3P62318 126 aaKnown RBP16.29■□□□□ 0.2
SEMA6C-201ENST00000341697 CD177Q8N6Q3 437 aa16.29■□□□□ 0.2
SEMA6C-201ENST00000341697 LDLRAD4O15165 306 aa16.29■□□□□ 0.2
SEMA6C-201ENST00000341697 BTCP35070 178 aa16.29■□□□□ 0.2
SEMA6C-201ENST00000341697 C2orf68Q2NKX9 166 aa16.29■□□□□ 0.2
SEMA6C-201ENST00000341697 C19orf35Q6ZS72 473 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 TMEM116Q8NCL8 245 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 SNRNP200O75643 2136 aaKnown RBP16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 APCSP02743 223 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 GCHFRP30047 84 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 FUT9Q9Y231 359 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 ZNF407Q9C0G0 2248 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 DOCK9Q9BZ29 2069 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 IGHV3OR16-13A0A075B7E8 117 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 IGHV3-74A0A0B4J1X5 117 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 TRAV40A0A0B4J280 105 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 PCNX2A6NKB5 2137 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 C15orf61A6NNL5 157 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 F8VVB4 439 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 F8VWA3 439 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 PHOX2AO14813 284 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 GPR183P32249 361 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 IQCJQ1A5X6 159 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 SRSF12Q8WXF0 261 aaKnown RBP16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 VAMP8Q9BV40 100 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 MUC6Q6W4X9 2439 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 TIMM23O14925 209 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 F12P00748 615 aaPredicted RBP16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 IGFBP2P18065 325 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 TEX45Q8NA69 505 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 JMJD8Q96S16 334 aa16.28■□□□□ 0.2
SEMA6C-201ENST00000341697 TMEM200BQ69YZ2 307 aa16.27■□□□□ 0.2
SEMA6C-201ENST00000341697 M0R2Z0 102 aa16.27■□□□□ 0.2
SEMA6C-201ENST00000341697 PRSS1P07477 247 aa16.27■□□□□ 0.2
SEMA6C-201ENST00000341697 CD24P25063 80 aa16.27■□□□□ 0.2
SEMA6C-201ENST00000341697 CRYBB3P26998 211 aa16.27■□□□□ 0.2
SEMA6C-201ENST00000341697 RAMP3O60896 148 aa16.27■□□□□ 0.19
SEMA6C-201ENST00000341697 TSPOP30536 169 aa16.27■□□□□ 0.19
SEMA6C-201ENST00000341697 RPRMLQ8N4K4 120 aa16.27■□□□□ 0.19
SEMA6C-201ENST00000341697 PRSS22Q9GZN4 317 aa16.27■□□□□ 0.19
SEMA6C-201ENST00000341697 RPRMQ9NS64 109 aa16.27■□□□□ 0.19
SEMA6C-201ENST00000341697 METRNQ9UJH8 293 aa16.27■□□□□ 0.19
SEMA6C-201ENST00000341697 HEATR1Q9H583 2144 aaKnown RBP16.27■□□□□ 0.19
SEMA6C-201ENST00000341697 RRHO14718 337 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms