RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 GGNBP1Q5YKI7 109 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 RUSC1-AS1Q66K80 236 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 LHFPL4Q7Z7J7 247 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 OR4C16Q8NGL9 310 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 OR4C13Q8NGP0 309 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 DIRAS2Q96HU8 199 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 DCUN1D5Q9BTE7 237 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 MRPL20Q9BYC9 149 aaKnown RBP2.74□□□□□ -1.97
CCDC66-202ENST00000341455 PARP12Q9H0J9 701 aaKnown RBP2.74□□□□□ -1.97
CCDC66-202ENST00000341455 MAGT1Q9H0U3 335 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 C11orf1Q9H5F2 150 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 IFT46Q9NQC8 304 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 OR2S2Q9NQN1 319 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 SERTAD4Q9NUC0 356 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 TMEM14BQ9NUH8 114 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 CSMD1Q96PZ7 3565 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 IGHV3-64DA0A0J9YX35 117 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 TEX13DA0A0J9YY54 714 aaPredicted RBP2.74□□□□□ -1.97
CCDC66-202ENST00000341455 C7orf66A4D0T2 115 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 LINC00473A8K010 186 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 FAM90A26D6RGX4 464 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 RRHO14718 337 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 NBR2O15453 112 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 CIDEAO60543 219 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 SAP30O75446 220 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 PTTG1O95997 202 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 IGHG4P01861 327 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 F2RP25116 425 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 NUP62P37198 522 aaPredicted RBP2.74□□□□□ -1.97
CCDC66-202ENST00000341455 CDKN1BP46527 198 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 SSTP61278 116 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 SUPT4H1P63272 117 aaKnown RBP2.74□□□□□ -1.97
CCDC66-202ENST00000341455 MRPS15P82914 257 aaKnown RBP2.74□□□□□ -1.97
CCDC66-202ENST00000341455 EGFEM1PQ0D2K5 195 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 IL15RAQ13261 267 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 FOXE3Q13461 319 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 KIAA0141Q14154 515 aaPredicted RBP2.74□□□□□ -1.97
CCDC66-202ENST00000341455 PSG5Q15238 335 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 RBMS2Q15434 407 aaKnown RBP2.74□□□□□ -1.97
CCDC66-202ENST00000341455 NMSQ5H8A3 153 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 ZNF562Q6V9R5 426 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 ZNF818PQ6ZRF7 136 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 Q8N402 240 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 TTC9CQ8N5M4 171 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 GVQW1Q8N7I0 195 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 TPRX1Q8N7U7 411 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 CCDC71LQ8N9Z2 235 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 BPIFCQ8NFQ6 507 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 OR4S2Q8NH73 311 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 VSTM2AQ8TAG5 236 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 C17orf50Q8WW18 174 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 SEC22AQ96IW7 307 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 RAB40CQ96S21 281 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 TMEM222Q9H0R3 208 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 C5orf66Q9H5L9 145 aa2.74□□□□□ -1.97
CCDC66-202ENST00000341455 PKDREJQ9NTG1 2253 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 SNRPGP15A8MWD9 76 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 FNDC10F2Z333 226 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 ATG12O94817 140 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 KBTBD11O94819 623 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 CD3DP04234 171 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 NPSP0C0P6 89 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 BAMBIQ13145 260 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 CATR1Q13166 79 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 TMEM187Q14656 261 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 C5orf64Q2M2E5 130 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 AKIRIN2Q53H80 203 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 RNASE10Q5GAN6 216 aaKnown RBP2.73□□□□□ -1.97
CCDC66-202ENST00000341455 STPG2Q8N412 459 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 B9D2Q9BPU9 175 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 MARVELD1Q9BSK0 173 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 NAA60Q9H7X0 242 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 SLC2A9Q9NRM0 540 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 KLK11Q9UBX7 282 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 ZNF230Q9UIE0 474 aaPredicted RBP2.73□□□□□ -1.97
CCDC66-202ENST00000341455 NUBP2Q9Y5Y2 271 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 CELSR1Q9NYQ6 3014 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 DOCK11Q5JSL3 2073 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 CLPSL1A2RUU4 121 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 BTBD17A6NE02 478 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 CCDC160A6NGH7 325 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 FAM25AB3EWG3 89 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 FAM25CB3EWG5 89 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 FAM25GB3EWG6 89 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 H0YIZ8 118 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 MPPED1O15442 326 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 DUS4LO95620 317 aaKnown RBP2.73□□□□□ -1.97
CCDC66-202ENST00000341455 RAB3DO95716 219 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 IGKV1-39P01597 117 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 APOA2P02652 100 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 IGKV1D-39P04432 117 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 PSMB8P28062 276 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 FCGR2CP31995 323 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 OR3A3P47888 321 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 RPL30P62888 115 aaKnown RBP2.73□□□□□ -1.97
CCDC66-202ENST00000341455 RTL8BQ17RB0 113 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 FAM131AQ6UXB0 335 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 Q6ZSV7 163 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 LINC00469Q8N7U9 141 aa2.73□□□□□ -1.97
CCDC66-202ENST00000341455 MAPK1IP1LQ8NDC0 245 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms