RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 PRCDQ00LT1 54 aa12.32□□□□□ -0.44
TUBB4B-201ENST00000340384 GUCA2BQ16661 112 aa12.32□□□□□ -0.44
TUBB4B-201ENST00000340384 Q5PR19 223 aa12.32□□□□□ -0.44
TUBB4B-201ENST00000340384 CLEC2AQ6UVW9 174 aa12.32□□□□□ -0.44
TUBB4B-201ENST00000340384 SLC24A4Q8NFF2 622 aa12.32□□□□□ -0.44
TUBB4B-201ENST00000340384 ST6GALNAC6Q969X2 333 aa12.32□□□□□ -0.44
TUBB4B-201ENST00000340384 FOXC2Q99958 501 aa12.32□□□□□ -0.44
TUBB4B-201ENST00000340384 SCRT1Q9BWW7 348 aa12.32□□□□□ -0.44
TUBB4B-201ENST00000340384 CLEC7AQ9BXN2 247 aa12.32□□□□□ -0.44
TUBB4B-201ENST00000340384 A0A1B0GV50 99 aa12.31□□□□□ -0.44
TUBB4B-201ENST00000340384 NDUFS8O00217 210 aa12.31□□□□□ -0.44
TUBB4B-201ENST00000340384 IFNA4P05014 189 aa12.31□□□□□ -0.44
TUBB4B-201ENST00000340384 LIPFP07098 398 aa12.31□□□□□ -0.44
TUBB4B-201ENST00000340384 LMO4P61968 165 aa12.31□□□□□ -0.44
TUBB4B-201ENST00000340384 KHDC3LQ587J8 217 aa12.31□□□□□ -0.44
TUBB4B-201ENST00000340384 WDR25Q64LD2 544 aaPredicted RBP12.31□□□□□ -0.44
TUBB4B-201ENST00000340384 ATRAIDQ6UW56 229 aa12.31□□□□□ -0.44
TUBB4B-201ENST00000340384 PRSS57Q6UWY2 283 aa12.31□□□□□ -0.44
TUBB4B-201ENST00000340384 BEND2Q8NDZ0 799 aa12.31□□□□□ -0.44
TUBB4B-201ENST00000340384 WFDC11Q8NEX6 87 aa12.31□□□□□ -0.44
TUBB4B-201ENST00000340384 NPCDR1Q9BY65 106 aa12.31□□□□□ -0.44
TUBB4B-201ENST00000340384 WDR83OSQ9Y284 106 aa12.31□□□□□ -0.44
TUBB4B-201ENST00000340384 FNDC10F2Z333 226 aa12.3□□□□□ -0.44
TUBB4B-201ENST00000340384 IGKV1-16P04430 117 aa12.3□□□□□ -0.44
TUBB4B-201ENST00000340384 HSPB1P04792 205 aaKnown RBP12.3□□□□□ -0.44
TUBB4B-201ENST00000340384 SAA1P0DJI8 122 aaPredicted RBP12.3□□□□□ -0.44
TUBB4B-201ENST00000340384 MDKP21741 143 aaPredicted RBP12.3□□□□□ -0.44
TUBB4B-201ENST00000340384 TAGLN2P37802 199 aaKnown RBP12.3□□□□□ -0.44
TUBB4B-201ENST00000340384 ELLP55199 621 aaPredicted RBP12.3□□□□□ -0.44
TUBB4B-201ENST00000340384 ACOT6Q3I5F7 207 aaPredicted RBP12.3□□□□□ -0.44
TUBB4B-201ENST00000340384 VMA21Q3ZAQ7 101 aa12.3□□□□□ -0.44
TUBB4B-201ENST00000340384 ZNF506Q5JVG8 444 aa12.3□□□□□ -0.44
TUBB4B-201ENST00000340384 RCC1LQ96I51 464 aaKnown RBP12.3□□□□□ -0.44
TUBB4B-201ENST00000340384 ACTR3CQ9C0K3 210 aaPredicted RBP12.3□□□□□ -0.44
TUBB4B-201ENST00000340384 SLC39A9Q9NUM3 307 aa12.3□□□□□ -0.44
TUBB4B-201ENST00000340384 ZNRD1Q9P1U0 126 aa12.3□□□□□ -0.44
TUBB4B-201ENST00000340384 TEX15Q9BXT5 2789 aa12.3□□□□□ -0.44
TUBB4B-201ENST00000340384 IGHV2-26A0A0B4J1V2 119 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 CTXND1A0A1B0GTU2 59 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 CYB5BO43169 146 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 LGALS7P47929 136 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 DSCR9P59020 149 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 RPS16P62249 146 aaKnown RBP12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 RAB31Q13636 194 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 HLA-DRB5Q30154 266 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 FFAR4Q5NUL3 377 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 MRPL41Q8IXM3 137 aaKnown RBP12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 CLDND2Q8NHS1 167 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 TMEM167AQ8TBQ9 72 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 PIMREGQ9BSJ6 248 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 HINT2Q9BX68 163 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 COMMD5Q9GZQ3 224 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 A0A1W2PN81 502 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 SMCO3A2RU48 225 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 MAP1LC3B2A6NCE7 125 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 C9JQL5 133 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 CHRNA7P36544 502 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 REG1BP48304 166 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 RPL8P62917 257 aaKnown RBP12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 PMS2P11Q13670 270 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 C11orf42Q8N5U0 333 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 CLRN3Q8NCR9 226 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 LY6G5BQ8NDX9 201 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 OR10G4Q8NGN3 311 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 OR10G9Q8NGN4 311 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 OR10G7Q8NGN6 311 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 OR1L8Q8NGR8 309 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 Q96MF0 132 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 MAP1LC3BQ9GZQ8 125 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 PATZ1Q9HBE1 687 aaKnown RBP12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 NPVFQ9HCQ7 196 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 ITPR3Q14573 2671 aa12.29□□□□□ -0.44
TUBB4B-201ENST00000340384 ZANQ9Y493 2812 aa12.28□□□□□ -0.44
TUBB4B-201ENST00000340384 TEX50A0A1B0GTY4 177 aa12.28□□□□□ -0.44
TUBB4B-201ENST00000340384 DNASE2O00115 360 aaPredicted RBP12.28□□□□□ -0.44
TUBB4B-201ENST00000340384 RRHO14718 337 aa12.28□□□□□ -0.44
TUBB4B-201ENST00000340384 IGHV2-5P01817 119 aa12.28□□□□□ -0.44
TUBB4B-201ENST00000340384 CCL20P78556 96 aa12.28□□□□□ -0.44
TUBB4B-201ENST00000340384 HAGHQ16775 308 aa12.28□□□□□ -0.44
TUBB4B-201ENST00000340384 SOHLH1Q5JUK2 328 aa12.28□□□□□ -0.44
TUBB4B-201ENST00000340384 RBMS3Q6XE24 437 aaKnown RBP12.28□□□□□ -0.44
TUBB4B-201ENST00000340384 TET2Q6N021 2002 aaPredicted RBP12.28□□□□□ -0.44
TUBB4B-201ENST00000340384 MED13LQ71F56 2210 aa12.27□□□□□ -0.44
TUBB4B-201ENST00000340384 MYO9AB2RTY4 2548 aa12.27□□□□□ -0.44
TUBB4B-201ENST00000340384 LOC102723971A0A1B0GUV8 181 aa12.27□□□□□ -0.44
TUBB4B-201ENST00000340384 SRRM4A7MD48 611 aaKnown RBP12.27□□□□□ -0.44
TUBB4B-201ENST00000340384 PRSS46E5RG02 174 aa12.27□□□□□ -0.44
TUBB4B-201ENST00000340384 INS-IGF2F8WCM5 200 aa12.27□□□□□ -0.44
TUBB4B-201ENST00000340384 M0R1W7 72 aa12.27□□□□□ -0.44
TUBB4B-201ENST00000340384 TSPAN4O14817 238 aa12.27□□□□□ -0.44
TUBB4B-201ENST00000340384 IGLV1-47P01700 117 aa12.27□□□□□ -0.44
TUBB4B-201ENST00000340384 OPRK1P41145 380 aa12.27□□□□□ -0.44
TUBB4B-201ENST00000340384 ERHP84090 104 aaKnown RBP12.27□□□□□ -0.44
TUBB4B-201ENST00000340384 ACSM6Q6P461 480 aa12.27□□□□□ -0.44
TUBB4B-201ENST00000340384 LCN15Q6UWW0 184 aa12.27□□□□□ -0.44
TUBB4B-201ENST00000340384 VSIRQ9H7M9 311 aa12.27□□□□□ -0.44
TUBB4B-201ENST00000340384 GNG13Q9P2W3 67 aa12.27□□□□□ -0.44
TUBB4B-201ENST00000340384 ONECUT1Q9UBC0 465 aa12.27□□□□□ -0.44
TUBB4B-201ENST00000340384 BUB1B-PAK6H3BSN5 160 aa12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 CA2P00918 260 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms