RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 CTDSPLO15194 276 aa11.14□□□□□ -0.63
ERCC1-203ENST00000340192 SNAPC5O75971 98 aa11.14□□□□□ -0.63
ERCC1-203ENST00000340192 IGKV1-39P01597 117 aa11.14□□□□□ -0.63
ERCC1-203ENST00000340192 IGKV1D-39P04432 117 aa11.14□□□□□ -0.63
ERCC1-203ENST00000340192 GP9P14770 177 aa11.14□□□□□ -0.63
ERCC1-203ENST00000340192 PTBP1P26599 531 aaKnown RBP eCLIP11.14□□□□□ -0.63
ERCC1-203ENST00000340192 PPP5CP53041 499 aa11.14□□□□□ -0.63
ERCC1-203ENST00000340192 PIGPP57054 158 aa11.14□□□□□ -0.63
ERCC1-203ENST00000340192 RND3P61587 244 aa11.14□□□□□ -0.63
ERCC1-203ENST00000340192 WT1-ASQ06250 92 aa11.14□□□□□ -0.63
ERCC1-203ENST00000340192 SCGB2B2Q4G0G5 96 aa11.14□□□□□ -0.63
ERCC1-203ENST00000340192 THOC7Q6I9Y2 204 aaKnown RBP11.14□□□□□ -0.63
ERCC1-203ENST00000340192 TERB2Q8NHR7 220 aa11.14□□□□□ -0.63
ERCC1-203ENST00000340192 EEF1AKMT3Q96AZ1 226 aa11.14□□□□□ -0.63
ERCC1-203ENST00000340192 SEC22AQ96IW7 307 aa11.14□□□□□ -0.63
ERCC1-203ENST00000340192 CCDC140Q96MF4 163 aa11.14□□□□□ -0.63
ERCC1-203ENST00000340192 HINT2Q9BX68 163 aa11.14□□□□□ -0.63
ERCC1-203ENST00000340192 NDUFA4L2Q9NRX3 87 aa11.14□□□□□ -0.63
ERCC1-203ENST00000340192 RABL2AQ9UBK7 228 aaPredicted RBP11.14□□□□□ -0.63
ERCC1-203ENST00000340192 PRNDQ9UKY0 176 aa11.14□□□□□ -0.63
ERCC1-203ENST00000340192 RABL2BQ9UNT1 228 aa11.14□□□□□ -0.63
ERCC1-203ENST00000340192 DMRT1Q9Y5R6 373 aa11.14□□□□□ -0.63
ERCC1-203ENST00000340192 HLA-AP01891 365 aaKnown RBP11.13□□□□□ -0.63
ERCC1-203ENST00000340192 SERPINE2P07093 398 aa11.13□□□□□ -0.63
ERCC1-203ENST00000340192 CSN3P07498 182 aa11.13□□□□□ -0.63
ERCC1-203ENST00000340192 OR13C7P0DN81 318 aa11.13□□□□□ -0.63
ERCC1-203ENST00000340192 FAAP20Q6NZ36 180 aa11.13□□□□□ -0.63
ERCC1-203ENST00000340192 CLEC19AQ6UXS0 136 aa11.13□□□□□ -0.63
ERCC1-203ENST00000340192 HSD17B13Q7Z5P4 300 aaPredicted RBP11.13□□□□□ -0.63
ERCC1-203ENST00000340192 GDPD1Q8N9F7 314 aa11.13□□□□□ -0.63
ERCC1-203ENST00000340192 MCFD2Q8NI22 146 aa11.13□□□□□ -0.63
ERCC1-203ENST00000340192 MRGPRFQ96AM1 343 aa11.13□□□□□ -0.63
ERCC1-203ENST00000340192 TSC22D3Q99576 134 aa11.13□□□□□ -0.63
ERCC1-203ENST00000340192 TMEM14BQ9NUH8 114 aa11.13□□□□□ -0.63
ERCC1-203ENST00000340192 FKBP11Q9NYL4 201 aa11.13□□□□□ -0.63
ERCC1-203ENST00000340192 PEMTQ9UBM1 199 aa11.13□□□□□ -0.63
ERCC1-203ENST00000340192 TRBV7-1A0A0A6YYK4 115 aa11.12□□□□□ -0.63
ERCC1-203ENST00000340192 MFSD2BA6NFX1 497 aa11.12□□□□□ -0.63
ERCC1-203ENST00000340192 DBX1A6NMT0 343 aa11.12□□□□□ -0.63
ERCC1-203ENST00000340192 C15orf61A6NNL5 157 aa11.12□□□□□ -0.63
ERCC1-203ENST00000340192 H0Y980 276 aa11.12□□□□□ -0.63
ERCC1-203ENST00000340192 GGCTO75223 188 aaKnown RBP11.12□□□□□ -0.63
ERCC1-203ENST00000340192 OR2C1O95371 312 aa11.12□□□□□ -0.63
ERCC1-203ENST00000340192 TNFSF8P32971 234 aa11.12□□□□□ -0.63
ERCC1-203ENST00000340192 ARL3P36405 182 aa11.12□□□□□ -0.63
ERCC1-203ENST00000340192 MEF2DQ14814 521 aa11.12□□□□□ -0.63
ERCC1-203ENST00000340192 C11orf87Q6NUJ2 197 aa11.12□□□□□ -0.63
ERCC1-203ENST00000340192 H2BFWTQ7Z2G1 175 aa11.12□□□□□ -0.63
ERCC1-203ENST00000340192 OR13C8Q8NGS7 320 aa11.12□□□□□ -0.63
ERCC1-203ENST00000340192 OR5B3Q8NH48 314 aa11.12□□□□□ -0.63
ERCC1-203ENST00000340192 ZFAND1Q8TCF1 268 aa11.12□□□□□ -0.63
ERCC1-203ENST00000340192 MARCH1Q8TCQ1 289 aa11.12□□□□□ -0.63
ERCC1-203ENST00000340192 LSM10Q969L4 123 aaKnown RBP11.12□□□□□ -0.63
ERCC1-203ENST00000340192 CXorf58Q96LI9 332 aa11.12□□□□□ -0.63
ERCC1-203ENST00000340192 TP53RKQ96S44 253 aa11.12□□□□□ -0.63
ERCC1-203ENST00000340192 NXF2Q9GZY0 626 aaKnown RBP11.12□□□□□ -0.63
ERCC1-203ENST00000340192 SIGLEC8Q9NYZ4 499 aa11.12□□□□□ -0.63
ERCC1-203ENST00000340192 THYN1Q9P016 225 aa11.12□□□□□ -0.63
ERCC1-203ENST00000340192 SMAD5-AS1Q9Y6J3 95 aa11.12□□□□□ -0.63
ERCC1-203ENST00000340192 C3orf85A0A1B0GTC6 90 aa11.11□□□□□ -0.63
ERCC1-203ENST00000340192 CCDC160A6NGH7 325 aa11.11□□□□□ -0.63
ERCC1-203ENST00000340192 OR4C16Q8NGL9 310 aa11.11□□□□□ -0.63
ERCC1-203ENST00000340192 OR4A16Q8NH70 328 aa11.11□□□□□ -0.63
ERCC1-203ENST00000340192 COPZ2Q9P299 210 aa11.11□□□□□ -0.63
ERCC1-203ENST00000340192 RSL24D1Q9UHA3 163 aaKnown RBP11.11□□□□□ -0.63
ERCC1-203ENST00000340192 FABP12A6NFH5 140 aa11.1□□□□□ -0.63
ERCC1-203ENST00000340192 DISC1C4P0D8 188 aa11.1□□□□□ -0.63
ERCC1-203ENST00000340192 CYB5BO43169 146 aa11.1□□□□□ -0.63
ERCC1-203ENST00000340192 GSTZ1O43708 216 aaPredicted RBP11.1□□□□□ -0.63
ERCC1-203ENST00000340192 AKAIN1P0CW23 69 aa11.1□□□□□ -0.63
ERCC1-203ENST00000340192 MECP2P51608 486 aaKnown RBP11.1□□□□□ -0.63
ERCC1-203ENST00000340192 MFAP2P55001 183 aa11.1□□□□□ -0.63
ERCC1-203ENST00000340192 SLC25A24Q6NUK1 477 aa11.1□□□□□ -0.63
ERCC1-203ENST00000340192 GPHB5Q86YW7 130 aa11.1□□□□□ -0.63
ERCC1-203ENST00000340192 CCDC71LQ8N9Z2 235 aa11.1□□□□□ -0.63
ERCC1-203ENST00000340192 ZNF502Q8TBZ5 544 aa11.1□□□□□ -0.63
ERCC1-203ENST00000340192 TMEM56Q96MV1 263 aa11.1□□□□□ -0.63
ERCC1-203ENST00000340192 SOSTQ9BQB4 213 aa11.1□□□□□ -0.63
ERCC1-203ENST00000340192 ZC4H2Q9NQZ6 224 aa11.1□□□□□ -0.63
ERCC1-203ENST00000340192 F11RQ9Y624 299 aaKnown RBP11.1□□□□□ -0.63
ERCC1-203ENST00000340192 ANKRD20A5PA0PJZ0 165 aa11.09□□□□□ -0.63
ERCC1-203ENST00000340192 LGALS9O00182 355 aa11.09□□□□□ -0.63
ERCC1-203ENST00000340192 IGKV1-5P01602 117 aa11.09□□□□□ -0.63
ERCC1-203ENST00000340192 CLEC3BP05452 202 aa11.09□□□□□ -0.63
ERCC1-203ENST00000340192 CTSDP07339 412 aaPredicted RBP11.09□□□□□ -0.63
ERCC1-203ENST00000340192 NHLRC4P0CG21 123 aaPredicted RBP11.09□□□□□ -0.63
ERCC1-203ENST00000340192 GPR183P32249 361 aa11.09□□□□□ -0.63
ERCC1-203ENST00000340192 IZUMO4Q1ZYL8 232 aa11.09□□□□□ -0.63
ERCC1-203ENST00000340192 SP6Q3SY56 376 aa11.09□□□□□ -0.63
ERCC1-203ENST00000340192 LCN12Q6JVE5 192 aa11.09□□□□□ -0.63
ERCC1-203ENST00000340192 ADAMTSL5Q6ZMM2 481 aa11.09□□□□□ -0.63
ERCC1-203ENST00000340192 VN1R17PQ8TDU5 208 aa11.09□□□□□ -0.63
ERCC1-203ENST00000340192 RBM38Q9H0Z9 239 aaKnown RBP11.09□□□□□ -0.63
ERCC1-203ENST00000340192 IZUMO1RA6ND01 250 aa11.08□□□□□ -0.64
ERCC1-203ENST00000340192 C2orf70A6NJV1 201 aa11.08□□□□□ -0.64
ERCC1-203ENST00000340192 EDN2P20800 178 aa11.08□□□□□ -0.64
ERCC1-203ENST00000340192 SURF2Q15527 256 aaPredicted RBP11.08□□□□□ -0.64
ERCC1-203ENST00000340192 TRIM16LQ309B1 348 aa11.08□□□□□ -0.64
ERCC1-203ENST00000340192 FAM106AQ4KMX7 169 aa11.08□□□□□ -0.64
ERCC1-203ENST00000340192 Q8N1Y9 231 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms