RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 TNCP24821 2201 aa13.36□□□□□ -0.27
LITAF-201ENST00000339430 PPP1R2P9O14990 202 aa13.36□□□□□ -0.27
LITAF-201ENST00000339430 ARL14EPLP0DKL9 152 aa13.36□□□□□ -0.27
LITAF-201ENST00000339430 OPRK1P41145 380 aa13.36□□□□□ -0.27
LITAF-201ENST00000339430 CDPF1Q6NVV7 123 aa13.36□□□□□ -0.27
LITAF-201ENST00000339430 OR10A7Q8NGE5 316 aa13.36□□□□□ -0.27
LITAF-201ENST00000339430 OR51M1Q9H341 326 aa13.36□□□□□ -0.27
LITAF-201ENST00000339430 TMPRSS2O15393 492 aa13.35□□□□□ -0.27
LITAF-201ENST00000339430 SOX15O60248 233 aa13.35□□□□□ -0.27
LITAF-201ENST00000339430 RD3LP0DJH9 198 aa13.35□□□□□ -0.27
LITAF-201ENST00000339430 TNFSF4P23510 183 aa13.35□□□□□ -0.27
LITAF-201ENST00000339430 THBS3P49746 956 aa13.35□□□□□ -0.27
LITAF-201ENST00000339430 GNB1P62873 340 aa13.35□□□□□ -0.27
LITAF-201ENST00000339430 HIST3H2BBQ8N257 126 aa13.35□□□□□ -0.27
LITAF-201ENST00000339430 C1orf159Q96HA4 380 aa13.35□□□□□ -0.27
LITAF-201ENST00000339430 OR5B12Q96R08 314 aa13.35□□□□□ -0.27
LITAF-201ENST00000339430 IDI2-AS1Q9NZ38 188 aa13.35□□□□□ -0.27
LITAF-201ENST00000339430 A0A1W2PPQ1 181 aa13.35□□□□□ -0.27
LITAF-201ENST00000339430 PGPEP1LA6NFU8 196 aa13.35□□□□□ -0.27
LITAF-201ENST00000339430 PHOX2AO14813 284 aa13.35□□□□□ -0.27
LITAF-201ENST00000339430 MPDU1O75352 247 aa13.35□□□□□ -0.27
LITAF-201ENST00000339430 IRF2P14316 349 aa13.35□□□□□ -0.27
LITAF-201ENST00000339430 NDUFB7P17568 137 aa13.35□□□□□ -0.27
LITAF-201ENST00000339430 ARSJQ5FYB0 599 aaPredicted RBP13.35□□□□□ -0.27
LITAF-201ENST00000339430 ZNF788Q6ZQV5 615 aa13.35□□□□□ -0.27
LITAF-201ENST00000339430 ZNF439Q8NDP4 499 aa13.35□□□□□ -0.27
LITAF-201ENST00000339430 SLC24A4Q8NFF2 622 aa13.35□□□□□ -0.27
LITAF-201ENST00000339430 FAM216AQ8WUB2 273 aa13.35□□□□□ -0.27
LITAF-201ENST00000339430 NDUFB4O95168 129 aa13.34□□□□□ -0.27
LITAF-201ENST00000339430 CA2P00918 260 aa13.34□□□□□ -0.27
LITAF-201ENST00000339430 S100PP25815 95 aa13.34□□□□□ -0.27
LITAF-201ENST00000339430 NPY1RP25929 384 aa13.34□□□□□ -0.27
LITAF-201ENST00000339430 CHRNA7P36544 502 aa13.34□□□□□ -0.27
LITAF-201ENST00000339430 OR4X1Q8NH49 305 aa13.34□□□□□ -0.27
LITAF-201ENST00000339430 PCGF1Q9BSM1 259 aa13.34□□□□□ -0.27
LITAF-201ENST00000339430 RAB9BQ9NP90 201 aa13.34□□□□□ -0.27
LITAF-201ENST00000339430 NGBQ9NPG2 151 aa13.34□□□□□ -0.27
LITAF-201ENST00000339430 ITGB1BP1O14713 200 aa13.34□□□□□ -0.27
LITAF-201ENST00000339430 LY86O95711 162 aa13.34□□□□□ -0.27
LITAF-201ENST00000339430 HSPE1P61604 102 aaKnown RBP13.34□□□□□ -0.27
LITAF-201ENST00000339430 NPVFQ9HCQ7 196 aa13.34□□□□□ -0.27
LITAF-201ENST00000339430 ENY2Q9NPA8 101 aa13.34□□□□□ -0.27
LITAF-201ENST00000339430 TMEM14BQ9NUH8 114 aa13.34□□□□□ -0.27
LITAF-201ENST00000339430 ANKHD1Q8IWZ3 2542 aaKnown RBP13.33□□□□□ -0.28
LITAF-201ENST00000339430 IGKV1-16P04430 117 aa13.33□□□□□ -0.28
LITAF-201ENST00000339430 FABP4P15090 132 aa13.33□□□□□ -0.28
LITAF-201ENST00000339430 SPATA31B1PQ5VZV4 182 aa13.33□□□□□ -0.28
LITAF-201ENST00000339430 RAB1CQ92928 201 aa13.33□□□□□ -0.28
LITAF-201ENST00000339430 FOXA2Q9Y261 457 aaPredicted RBP13.33□□□□□ -0.28
LITAF-201ENST00000339430 OR51B2Q9Y5P1 312 aa13.33□□□□□ -0.28
LITAF-201ENST00000339430 SPTBN1Q01082 2364 aaKnown RBP13.33□□□□□ -0.28
LITAF-201ENST00000339430 IL6RP08887 468 aaPredicted RBP13.32□□□□□ -0.28
LITAF-201ENST00000339430 ARFGEF3Q5TH69 2177 aa13.32□□□□□ -0.28
LITAF-201ENST00000339430 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.32□□□□□ -0.28
LITAF-201ENST00000339430 NCOR1P1Q9H4R4 102 aa13.32□□□□□ -0.28
LITAF-201ENST00000339430 SRD5A3Q9H8P0 318 aa13.32□□□□□ -0.28
LITAF-201ENST00000339430 ZNF729A6NN14 1252 aaPredicted RBP13.32□□□□□ -0.28
LITAF-201ENST00000339430 TGOLN2O43493 480 aa13.32□□□□□ -0.28
LITAF-201ENST00000339430 HRASP01112 189 aa13.32□□□□□ -0.28
LITAF-201ENST00000339430 NUP37Q8NFH4 326 aa13.32□□□□□ -0.28
LITAF-201ENST00000339430 SEPSECSQ9HD40 501 aaKnown RBP13.32□□□□□ -0.28
LITAF-201ENST00000339430 PPP5D1E7EU14 171 aa13.31□□□□□ -0.28
LITAF-201ENST00000339430 PDE6DO43924 150 aa13.31□□□□□ -0.28
LITAF-201ENST00000339430 STAG3L2P0CL84 134 aa13.31□□□□□ -0.28
LITAF-201ENST00000339430 STAG3L3P0CL85 134 aa13.31□□□□□ -0.28
LITAF-201ENST00000339430 CT45A6P0DMU7 189 aa13.31□□□□□ -0.28
LITAF-201ENST00000339430 CT45A5P0DMU8 189 aa13.31□□□□□ -0.28
LITAF-201ENST00000339430 CT45A7P0DMV0 189 aa13.31□□□□□ -0.28
LITAF-201ENST00000339430 HNF1AP20823 631 aa13.31□□□□□ -0.28
LITAF-201ENST00000339430 TEPPQ6URK8 271 aa13.31□□□□□ -0.28
LITAF-201ENST00000339430 STPG3Q8N7X2 389 aa13.31□□□□□ -0.28
LITAF-201ENST00000339430 ZNF114Q8NC26 417 aa13.31□□□□□ -0.28
LITAF-201ENST00000339430 LSM4Q9Y4Z0 139 aaKnown RBP13.31□□□□□ -0.28
LITAF-201ENST00000339430 PKDREJQ9NTG1 2253 aa13.31□□□□□ -0.28
LITAF-201ENST00000339430 ELOA3CA0A087WX78 387 aaPredicted RBP13.31□□□□□ -0.28
LITAF-201ENST00000339430 TRBV23-1A0A0A0MS06 115 aa13.31□□□□□ -0.28
LITAF-201ENST00000339430 SRRM4A7MD48 611 aaKnown RBP13.31□□□□□ -0.28
LITAF-201ENST00000339430 OR4A8P0C604 315 aa13.31□□□□□ -0.28
LITAF-201ENST00000339430 IGFBP2P18065 325 aa13.31□□□□□ -0.28
LITAF-201ENST00000339430 LINC01551Q86U37 167 aa13.31□□□□□ -0.28
LITAF-201ENST00000339430 ITLN2Q8WWU7 325 aaPredicted RBP13.31□□□□□ -0.28
LITAF-201ENST00000339430 ANAPC16Q96DE5 110 aa13.31□□□□□ -0.28
LITAF-201ENST00000339430 PYGO2Q9BRQ0 406 aa13.31□□□□□ -0.28
LITAF-201ENST00000339430 KCNIP2Q9NS61 270 aa13.31□□□□□ -0.28
LITAF-201ENST00000339430 SLC35D1Q9NTN3 355 aa13.31□□□□□ -0.28
LITAF-201ENST00000339430 RPUSD1Q9UJJ7 312 aaKnown RBP13.31□□□□□ -0.28
LITAF-201ENST00000339430 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.3□□□□□ -0.28
LITAF-201ENST00000339430 J3QR06 171 aa13.3□□□□□ -0.28
LITAF-201ENST00000339430 VENTXO95231 258 aa13.3□□□□□ -0.28
LITAF-201ENST00000339430 CCL3L1P16619 93 aa13.3□□□□□ -0.28
LITAF-201ENST00000339430 FAM3BP58499 235 aaPredicted RBP13.3□□□□□ -0.28
LITAF-201ENST00000339430 MOB3BQ86TA1 216 aa13.3□□□□□ -0.28
LITAF-201ENST00000339430 ADTRPQ96IZ2 230 aa13.3□□□□□ -0.28
LITAF-201ENST00000339430 TRAV20A0A0B4J274 112 aa13.3□□□□□ -0.28
LITAF-201ENST00000339430 SCO2A0A1W2PP80 73 aa13.3□□□□□ -0.28
LITAF-201ENST00000339430 FOXH1O75593 365 aa13.3□□□□□ -0.28
LITAF-201ENST00000339430 CXorf1O96002 111 aa13.3□□□□□ -0.28
LITAF-201ENST00000339430 IGHV2-70P01814 119 aa13.3□□□□□ -0.28
LITAF-201ENST00000339430 EFNB3Q15768 340 aa13.3□□□□□ -0.28
LITAF-201ENST00000339430 ADIPOQQ15848 244 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms