RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ZNF430Q9H8G1 570 aaPredicted RBP5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 PATZ1Q9HBE1 687 aaKnown RBP5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 GNG13Q9P2W3 67 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 CARHSP1Q9Y2V2 147 aaKnown RBP5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 HILPDAQ9Y5L2 63 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 TRBV23-1A0A0A0MS06 115 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 NUDT19A8MXV4 375 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 BUB1B-PAK6H3BSN5 160 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 SOX15O60248 233 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 AGAP20933 346 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 GATA2P23769 480 aaPredicted RBP5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 LCN2P80188 198 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 ICAM4Q14773 271 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 FFAR4Q5NUL3 377 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 MIC13Q5XKP0 118 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 LINC00311Q8N616 119 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 LY6G5BQ8NDX9 201 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 OR4C13Q8NGP0 309 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 CLDND2Q8NHS1 167 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 NRGNQ92686 78 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 RAB1CQ92928 201 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 CLUHP3Q96NS8 147 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 MGST2Q99735 147 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 CHODLQ9H9P2 273 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 MIOXQ9UGB7 285 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 CSPG4Q6UVK1 2322 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 ABCA2Q9BZC7 2435 aa5.96□□□□□ -1.45
SRFBP1-201ENST00000339397 IGKV1OR2-108A0A075B7D4 117 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 A6NNC1 897 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 APOA2P02652 100 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 NPY1RP25929 384 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 ZNF137PP52743 207 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 SERF2P84101 59 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 TLE4Q04727 773 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 WT1-ASQ06250 92 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 VWC2Q2TAL6 325 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 TMEM30BQ3MIR4 351 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 TMEM177Q53S58 311 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 SVBPQ8N300 66 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 CYB561D1Q8N8Q1 229 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 SLC24A4Q8NFF2 622 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 PSMG3Q9BT73 122 aaPredicted RBP5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 SSBP3Q9BWW4 388 aaPredicted RBP5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 CLEC7AQ9BXN2 247 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 TENM4Q6N022 2769 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 IGHV1-3A0A0C4DH29 117 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 FCN1O00602 326 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 RPL8P62917 257 aaKnown RBP5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 PRCDQ00LT1 54 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 TMEM41BQ5BJD5 291 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 HCP5Q6MZN7 132 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 OR10G4Q8NGN3 311 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 OR10G9Q8NGN4 311 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 OR10G7Q8NGN6 311 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 OSR1Q8TAX0 266 aaPredicted RBP5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 NEU4Q8WWR8 484 aaPredicted RBP5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 TIMD4Q96H15 378 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 BPESC1Q9GZL8 116 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 LPAR2Q9HBW0 351 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 BET1LQ9NYM9 111 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 WASHC3Q9Y3C0 194 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 INSIG2Q9Y5U4 225 aa5.96□□□□□ -1.46
SRFBP1-201ENST00000339397 LOC105371242A0A075B767 164 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 TMEM8BA6NDV4 472 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 YIF1AO95070 293 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 LIPFP07098 398 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 GPR6P46095 362 aaPredicted RBP5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 SSBP2P81877 361 aaPredicted RBP5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 PEA15Q15121 130 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 ZNF787Q6DD87 383 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 FAM122CQ6P4D5 195 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 CENPVQ7Z7K6 275 aaPredicted RBP5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 DYNAPQ8N1N2 210 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 RAB24Q969Q5 203 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 PLEKHA3Q9HB20 300 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 NDUFA4L2Q9NRX3 87 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 PRNDQ9UKY0 176 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 WDR83OSQ9Y284 106 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 MAP1LC3B2A6NCE7 125 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 SCAF4O95104 1147 aaKnown RBP5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 RAB13P51153 203 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 ATP6V1FQ16864 119 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 DHRS7BQ6IAN0 325 aaPredicted RBP5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 C8orf31Q8N9H6 132 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 OR2T6Q8NHC8 308 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 C8orf46Q8TAG6 207 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 RAB39BQ96DA2 213 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 COMMD5Q9GZQ3 224 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 MAP1LC3BQ9GZQ8 125 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 SLC35B3Q9H1N7 401 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 SLC39A9Q9NUM3 307 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 KIAA1456Q9P272 454 aa5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 PUS1Q9Y606 427 aaKnown RBP eCLIP5.95□□□□□ -1.46
SRFBP1-201ENST00000339397 IGHV3-21A0A0B4J1V1 117 aa5.94□□□□□ -1.46
SRFBP1-201ENST00000339397 A6NJY4 79 aa5.94□□□□□ -1.46
SRFBP1-201ENST00000339397 LY6LH3BQJ8 138 aa5.94□□□□□ -1.46
SRFBP1-201ENST00000339397 TIMM23O14925 209 aa5.94□□□□□ -1.46
SRFBP1-201ENST00000339397 FSTL3O95633 263 aa5.94□□□□□ -1.46
SRFBP1-201ENST00000339397 SNRNP70P08621 437 aaKnown RBP5.94□□□□□ -1.46
SRFBP1-201ENST00000339397 SRP19P09132 144 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms