RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 CHRNB4P30926 498 aa11.76□□□□□ -0.53
PCDH8-201ENST00000338862 BRS3P32247 399 aa11.76□□□□□ -0.53
PCDH8-201ENST00000338862 RAB7AP51149 207 aa11.76□□□□□ -0.53
PCDH8-201ENST00000338862 PMCHL1Q16048 86 aa11.76□□□□□ -0.53
PCDH8-201ENST00000338862 C1orf194Q5T5A4 169 aa11.76□□□□□ -0.53
PCDH8-201ENST00000338862 MCRIP2Q9BUT9 160 aaKnown RBP11.76□□□□□ -0.53
PCDH8-201ENST00000338862 M0R2Z0 102 aa11.76□□□□□ -0.53
PCDH8-201ENST00000338862 REG1AP05451 166 aa11.76□□□□□ -0.53
PCDH8-201ENST00000338862 TDGF1P3P51864 188 aa11.76□□□□□ -0.53
PCDH8-201ENST00000338862 Q6ZR03 302 aa11.76□□□□□ -0.53
PCDH8-201ENST00000338862 BCL2L2Q92843 193 aaPredicted RBP11.76□□□□□ -0.53
PCDH8-201ENST00000338862 MGST2Q99735 147 aa11.76□□□□□ -0.53
PCDH8-201ENST00000338862 COMMD5Q9GZQ3 224 aa11.76□□□□□ -0.53
PCDH8-201ENST00000338862 CXXC4Q9H2H0 198 aa11.76□□□□□ -0.53
PCDH8-201ENST00000338862 GNB4Q9HAV0 340 aa11.76□□□□□ -0.53
PCDH8-201ENST00000338862 COX5BP10606 129 aa11.75□□□□□ -0.53
PCDH8-201ENST00000338862 IBA57Q5T440 356 aaKnown RBP11.75□□□□□ -0.53
PCDH8-201ENST00000338862 TIMM9Q9Y5J7 89 aa11.75□□□□□ -0.53
PCDH8-201ENST00000338862 IGHV3-72A0A0B4J1Y9 119 aa11.75□□□□□ -0.53
PCDH8-201ENST00000338862 TRAV5A0A0B4J249 113 aa11.75□□□□□ -0.53
PCDH8-201ENST00000338862 MKRN2OSH3BPM6 223 aa11.75□□□□□ -0.53
PCDH8-201ENST00000338862 IGHV1-2P23083 117 aa11.75□□□□□ -0.53
PCDH8-201ENST00000338862 OPRK1P41145 380 aa11.75□□□□□ -0.53
PCDH8-201ENST00000338862 LCN2P80188 198 aa11.75□□□□□ -0.53
PCDH8-201ENST00000338862 TRA2AQ13595 282 aaKnown RBP eCLIP11.75□□□□□ -0.53
PCDH8-201ENST00000338862 GGTLC1Q9BX51 225 aa11.75□□□□□ -0.53
PCDH8-201ENST00000338862 NRN1Q9NPD7 142 aa11.75□□□□□ -0.53
PCDH8-201ENST00000338862 DCAF16Q9NXF7 216 aa11.75□□□□□ -0.53
PCDH8-201ENST00000338862 WDR83OSQ9Y284 106 aa11.75□□□□□ -0.53
PCDH8-201ENST00000338862 ZNF835Q9Y2P0 537 aa11.75□□□□□ -0.53
PCDH8-201ENST00000338862 WIPI2Q9Y4P8 454 aa11.75□□□□□ -0.53
PCDH8-201ENST00000338862 DMDP11532 3685 aa11.75□□□□□ -0.53
PCDH8-201ENST00000338862 CD24P25063 80 aa11.75□□□□□ -0.53
PCDH8-201ENST00000338862 UBE2G1P62253 170 aa11.75□□□□□ -0.53
PCDH8-201ENST00000338862 EFNB3Q15768 340 aa11.75□□□□□ -0.53
PCDH8-201ENST00000338862 ACP7Q6ZNF0 438 aa11.75□□□□□ -0.53
PCDH8-201ENST00000338862 COL6A6A6NMZ7 2263 aa11.75□□□□□ -0.53
PCDH8-201ENST00000338862 SNAI2O43623 268 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 ZCCHC24Q8N2G6 241 aaKnown RBP11.74□□□□□ -0.53
PCDH8-201ENST00000338862 TMEM45BQ96B21 275 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 NABP2Q9BQ15 211 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 PMCHL2Q9BQD1 86 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 AGMATQ9BSE5 352 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 COX7A2P2O60397 106 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 SELENOVP59797 346 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 MAJINQ3KP22 176 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 STUMQ69YW2 141 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 Q6ZS49 121 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 C5orf30Q96GV9 206 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 CCL13Q99616 98 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 LINC00470Q9BZP3 86 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 MLNRO43193 412 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 WISP2O76076 250 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 APOA2P02652 100 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 APCSP02743 223 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 S100A7P31151 101 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 COL5A1-AS1Q5SY13 56 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 FER1L6-AS2Q96M78 137 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 OR2V2Q96R30 315 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 IL36BQ9NZH7 164 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 OR51B2Q9Y5P1 312 aa11.74□□□□□ -0.53
PCDH8-201ENST00000338862 M0QZ24 198 aa11.73□□□□□ -0.53
PCDH8-201ENST00000338862 RNFT1Q5M7Z0 435 aa11.73□□□□□ -0.53
PCDH8-201ENST00000338862 OR9G1Q8NH87 305 aa11.73□□□□□ -0.53
PCDH8-201ENST00000338862 DAZAP1Q96EP5 407 aaKnown RBP11.73□□□□□ -0.53
PCDH8-201ENST00000338862 C9orf172C9J069 976 aa11.73□□□□□ -0.53
PCDH8-201ENST00000338862 TMPRSS2O15393 492 aa11.73□□□□□ -0.53
PCDH8-201ENST00000338862 ZBTB34Q8NCN2 500 aa11.73□□□□□ -0.53
PCDH8-201ENST00000338862 OR4S2Q8NH73 311 aa11.73□□□□□ -0.53
PCDH8-201ENST00000338862 MIEN1Q9BRT3 115 aa11.73□□□□□ -0.53
PCDH8-201ENST00000338862 CBY1Q9Y3M2 126 aa11.73□□□□□ -0.53
PCDH8-201ENST00000338862 RELBQ01201 579 aa11.73□□□□□ -0.53
PCDH8-201ENST00000338862 WDR82Q6UXN9 313 aa11.73□□□□□ -0.53
PCDH8-201ENST00000338862 TMEM178AQ8NBL3 297 aa11.73□□□□□ -0.53
PCDH8-201ENST00000338862 OR10W1Q8NGF6 305 aa11.73□□□□□ -0.53
PCDH8-201ENST00000338862 RNASEH2CQ8TDP1 164 aaKnown RBP11.73□□□□□ -0.53
PCDH8-201ENST00000338862 MUC3AQ02505 3323 aa11.73□□□□□ -0.53
PCDH8-201ENST00000338862 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.72□□□□□ -0.53
PCDH8-201ENST00000338862 DLEU1O43261 78 aa11.72□□□□□ -0.53
PCDH8-201ENST00000338862 DUTP33316 252 aaKnown RBP11.72□□□□□ -0.53
PCDH8-201ENST00000338862 PAFAH1B2P68402 229 aa11.72□□□□□ -0.53
PCDH8-201ENST00000338862 CCL8P80075 99 aa11.72□□□□□ -0.53
PCDH8-201ENST00000338862 UNQ5815/PRO19632Q6UWF5 114 aa11.72□□□□□ -0.53
PCDH8-201ENST00000338862 Q6ZSR3 168 aa11.72□□□□□ -0.53
PCDH8-201ENST00000338862 BEND2Q8NDZ0 799 aa11.72□□□□□ -0.53
PCDH8-201ENST00000338862 EAF1Q96JC9 268 aaPredicted RBP11.72□□□□□ -0.53
PCDH8-201ENST00000338862 IL19Q9UHD0 177 aa11.72□□□□□ -0.53
PCDH8-201ENST00000338862 FBXL7Q9UJT9 491 aa11.72□□□□□ -0.53
PCDH8-201ENST00000338862 SLC45A2Q9UMX9 530 aa11.72□□□□□ -0.53
PCDH8-201ENST00000338862 PYYP10082 97 aa11.72□□□□□ -0.53
PCDH8-201ENST00000338862 SLC35E1Q96K37 410 aa11.72□□□□□ -0.53
PCDH8-201ENST00000338862 SPRR3Q9UBC9 169 aa11.72□□□□□ -0.53
PCDH8-201ENST00000338862 NKX2-8O15522 239 aa11.72□□□□□ -0.53
PCDH8-201ENST00000338862 HCP5Q6MZN7 132 aa11.72□□□□□ -0.53
PCDH8-201ENST00000338862 OR4C5Q8NGB2 326 aa11.72□□□□□ -0.53
PCDH8-201ENST00000338862 DPRXA6NFQ7 191 aa11.71□□□□□ -0.53
PCDH8-201ENST00000338862 SLC25A5P05141 298 aaKnown RBP11.71□□□□□ -0.53
PCDH8-201ENST00000338862 CECR9P0C854 216 aa11.71□□□□□ -0.53
PCDH8-201ENST00000338862 UTF1Q5T230 341 aa11.71□□□□□ -0.53
PCDH8-201ENST00000338862 ITLN1Q8WWA0 313 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms