RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 RPP30P78346 268 aaKnown RBP11.75□□□□□ -0.53
CBX3-201ENST00000337620 ARL16Q0P5N6 197 aa11.75□□□□□ -0.53
CBX3-201ENST00000337620 TNXAQ16473 311 aa11.75□□□□□ -0.53
CBX3-201ENST00000337620 MRGPRG-AS1Q2M3A8 158 aa11.75□□□□□ -0.53
CBX3-201ENST00000337620 CYB5R2Q6BCY4 276 aa11.75□□□□□ -0.53
CBX3-201ENST00000337620 CIARTQ8N365 385 aaPredicted RBP11.75□□□□□ -0.53
CBX3-201ENST00000337620 OR1S2Q8NGQ3 325 aa11.75□□□□□ -0.53
CBX3-201ENST00000337620 FAM96BQ9Y3D0 163 aa11.75□□□□□ -0.53
CBX3-201ENST00000337620 ZFHX3Q15911 3703 aa11.75□□□□□ -0.53
CBX3-201ENST00000337620 ZNF469Q96JG9 3925 aaPredicted RBP11.75□□□□□ -0.53
CBX3-201ENST00000337620 NCBP2LA6PVI3 153 aaKnown RBP11.75□□□□□ -0.53
CBX3-201ENST00000337620 JTBO76095 146 aa11.75□□□□□ -0.53
CBX3-201ENST00000337620 BAP18Q8IXM2 172 aa11.75□□□□□ -0.53
CBX3-201ENST00000337620 OR10W1Q8NGF6 305 aa11.75□□□□□ -0.53
CBX3-201ENST00000337620 NDUFA4L2Q9NRX3 87 aa11.75□□□□□ -0.53
CBX3-201ENST00000337620 UBQLN2Q9UHD9 624 aa11.75□□□□□ -0.53
CBX3-201ENST00000337620 ITGB1BP2Q9UKP3 347 aa11.75□□□□□ -0.53
CBX3-201ENST00000337620 SOX21Q9Y651 276 aaPredicted RBP11.75□□□□□ -0.53
CBX3-201ENST00000337620 BORCS7-ASMTA0A0B4J1R7 106 aa11.74□□□□□ -0.53
CBX3-201ENST00000337620 HBG1P69891 147 aa11.74□□□□□ -0.53
CBX3-201ENST00000337620 HBG2P69892 147 aa11.74□□□□□ -0.53
CBX3-201ENST00000337620 EBI3Q14213 229 aa11.74□□□□□ -0.53
CBX3-201ENST00000337620 HAPLN4Q86UW8 402 aa11.74□□□□□ -0.53
CBX3-201ENST00000337620 THNSL2Q86YJ6 484 aa11.74□□□□□ -0.53
CBX3-201ENST00000337620 NPBQ8NG41 125 aa11.74□□□□□ -0.53
CBX3-201ENST00000337620 STOML3Q8TAV4 291 aa11.74□□□□□ -0.53
CBX3-201ENST00000337620 ITPR3Q14573 2671 aa11.74□□□□□ -0.53
CBX3-201ENST00000337620 CREBBPQ92793 2442 aa11.74□□□□□ -0.53
CBX3-201ENST00000337620 AKAP9Q99996 3911 aa11.74□□□□□ -0.53
CBX3-201ENST00000337620 C15orf62A8K5M9 175 aa11.74□□□□□ -0.53
CBX3-201ENST00000337620 FCN1O00602 326 aa11.74□□□□□ -0.53
CBX3-201ENST00000337620 EIF5AP63241 154 aaKnown RBP11.74□□□□□ -0.53
CBX3-201ENST00000337620 LILRB2Q8N423 598 aa11.74□□□□□ -0.53
CBX3-201ENST00000337620 PLXNB1O43157 2135 aa11.73□□□□□ -0.53
CBX3-201ENST00000337620 NDUFA3O95167 84 aa11.73□□□□□ -0.53
CBX3-201ENST00000337620 OR8U8P0C7N1 319 aa11.73□□□□□ -0.53
CBX3-201ENST00000337620 Q8N6K4 173 aa11.73□□□□□ -0.53
CBX3-201ENST00000337620 UBAC2Q8NBM4 344 aa11.73□□□□□ -0.53
CBX3-201ENST00000337620 OR10P1Q8NGE3 313 aa11.73□□□□□ -0.53
CBX3-201ENST00000337620 TEX15Q9BXT5 2789 aa11.73□□□□□ -0.53
CBX3-201ENST00000337620 CGB1A6NKQ9 187 aa11.72□□□□□ -0.53
CBX3-201ENST00000337620 CNIH1O95406 144 aa11.72□□□□□ -0.53
CBX3-201ENST00000337620 MAS1LP35410 378 aa11.72□□□□□ -0.53
CBX3-201ENST00000337620 RPL27AP46776 148 aaKnown RBP11.72□□□□□ -0.53
CBX3-201ENST00000337620 SLC38A11Q08AI6 406 aa11.72□□□□□ -0.53
CBX3-201ENST00000337620 ZNF266Q14584 549 aa11.72□□□□□ -0.53
CBX3-201ENST00000337620 SLC24A4Q8NFF2 622 aa11.72□□□□□ -0.53
CBX3-201ENST00000337620 ATP5SQ99766 215 aa11.72□□□□□ -0.53
CBX3-201ENST00000337620 ABCA1O95477 2261 aa11.72□□□□□ -0.53
CBX3-201ENST00000337620 A0A1B0GW64 132 aa11.72□□□□□ -0.53
CBX3-201ENST00000337620 A0A1W2PN81 502 aa11.72□□□□□ -0.53
CBX3-201ENST00000337620 CA2P00918 260 aa11.72□□□□□ -0.53
CBX3-201ENST00000337620 IFNA4P05014 189 aa11.72□□□□□ -0.53
CBX3-201ENST00000337620 NPY1RP25929 384 aa11.72□□□□□ -0.53
CBX3-201ENST00000337620 CHRNA7P36544 502 aa11.72□□□□□ -0.53
CBX3-201ENST00000337620 SNCAP37840 140 aa11.72□□□□□ -0.53
CBX3-201ENST00000337620 COMPP49747 757 aaPredicted RBP11.72□□□□□ -0.53
CBX3-201ENST00000337620 RAB11AP62491 216 aa11.72□□□□□ -0.53
CBX3-201ENST00000337620 ERHP84090 104 aaKnown RBP11.72□□□□□ -0.53
CBX3-201ENST00000337620 C5orf64Q2M2E5 130 aa11.72□□□□□ -0.53
CBX3-201ENST00000337620 ETV3LQ6ZN32 361 aa11.72□□□□□ -0.53
CBX3-201ENST00000337620 SCARB1Q8WTV0 552 aa11.72□□□□□ -0.53
CBX3-201ENST00000337620 MEGF9Q9H1U4 602 aa11.72□□□□□ -0.53
CBX3-201ENST00000337620 PMS2P5A8MQ11 134 aa11.71□□□□□ -0.53
CBX3-201ENST00000337620 FBXO24O75426 580 aa11.71□□□□□ -0.53
CBX3-201ENST00000337620 DFFBO76075 338 aa11.71□□□□□ -0.53
CBX3-201ENST00000337620 FBP1P09467 338 aa11.71□□□□□ -0.53
CBX3-201ENST00000337620 APELAP0DMC3 54 aa11.71□□□□□ -0.53
CBX3-201ENST00000337620 SLC25A24Q6NUK1 477 aa11.71□□□□□ -0.53
CBX3-201ENST00000337620 HSD17B11Q8NBQ5 300 aa11.71□□□□□ -0.53
CBX3-201ENST00000337620 TMEM170AQ8WVE7 144 aa11.71□□□□□ -0.53
CBX3-201ENST00000337620 PCNPQ8WW12 178 aaKnown RBP11.71□□□□□ -0.53
CBX3-201ENST00000337620 TMED6Q8WW62 240 aa11.71□□□□□ -0.53
CBX3-201ENST00000337620 PHYHIPLQ96FC7 376 aa11.71□□□□□ -0.53
CBX3-201ENST00000337620 SSX3Q99909 188 aa11.71□□□□□ -0.53
CBX3-201ENST00000337620 OR13C7P0DN81 318 aa11.71□□□□□ -0.54
CBX3-201ENST00000337620 HTR2BP41595 481 aa11.71□□□□□ -0.54
CBX3-201ENST00000337620 WT1-ASQ06250 92 aa11.71□□□□□ -0.54
CBX3-201ENST00000337620 FAM74A1Q5RGS3 127 aa11.71□□□□□ -0.54
CBX3-201ENST00000337620 STPG2Q8N412 459 aa11.71□□□□□ -0.54
CBX3-201ENST00000337620 C22orf15Q8WYQ4 148 aa11.71□□□□□ -0.54
CBX3-201ENST00000337620 PINX1Q96BK5 328 aaKnown RBP11.71□□□□□ -0.54
CBX3-201ENST00000337620 C1RLQ9NZP8 487 aa11.71□□□□□ -0.54
CBX3-201ENST00000337620 CSPG4Q6UVK1 2322 aa11.7□□□□□ -0.54
CBX3-201ENST00000337620 IFNA5P01569 189 aa11.7□□□□□ -0.54
CBX3-201ENST00000337620 REG1AP05451 166 aa11.7□□□□□ -0.54
CBX3-201ENST00000337620 NANPQ8TBE9 248 aa11.7□□□□□ -0.54
CBX3-201ENST00000337620 SRSF12Q8WXF0 261 aaKnown RBP11.7□□□□□ -0.54
CBX3-201ENST00000337620 SSBP2P81877 361 aaPredicted RBP11.69□□□□□ -0.54
CBX3-201ENST00000337620 PIFOQ8TCI5 191 aa11.69□□□□□ -0.54
CBX3-201ENST00000337620 RAB14P61106 215 aa11.69□□□□□ -0.54
CBX3-201ENST00000337620 FXYD3Q14802 87 aa11.69□□□□□ -0.54
CBX3-201ENST00000337620 ATP6V1FQ16864 119 aa11.69□□□□□ -0.54
CBX3-201ENST00000337620 TUSC1Q2TAM9 212 aa11.69□□□□□ -0.54
CBX3-201ENST00000337620 TMEM219Q86XT9 240 aa11.69□□□□□ -0.54
CBX3-201ENST00000337620 GINS3Q9BRX5 216 aa11.69□□□□□ -0.54
CBX3-201ENST00000337620 ARV1Q9H2C2 271 aa11.69□□□□□ -0.54
CBX3-201ENST00000337620 FLNAP21333 2647 aaKnown RBP11.68□□□□□ -0.54
CBX3-201ENST00000337620 UBE2L5PA0A1B0GUS4 154 aa11.68□□□□□ -0.54
CBX3-201ENST00000337620 IGLC7A0M8Q6 106 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms