RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CCDC140Q96MF4 163 aa8.02□□□□□ -1.13
CAPN3-202ENST00000337571 QTRT1Q9BXR0 403 aaKnown RBP8.02□□□□□ -1.13
CAPN3-202ENST00000337571 RBM38Q9H0Z9 239 aaKnown RBP8.02□□□□□ -1.13
CAPN3-202ENST00000337571 RNF167Q9H6Y7 350 aa8.02□□□□□ -1.13
CAPN3-202ENST00000337571 BATF3Q9NR55 127 aa8.02□□□□□ -1.13
CAPN3-202ENST00000337571 TMEM140Q9NV12 185 aa8.02□□□□□ -1.13
CAPN3-202ENST00000337571 EHFQ9NZC4 300 aa8.02□□□□□ -1.13
CAPN3-202ENST00000337571 MRPL27Q9P0M9 148 aaKnown RBP8.02□□□□□ -1.13
CAPN3-202ENST00000337571 UFC1Q9Y3C8 167 aa8.02□□□□□ -1.13
CAPN3-202ENST00000337571 SELENOKQ9Y6D0 94 aa8.02□□□□□ -1.13
CAPN3-202ENST00000337571 LYSTQ99698 3801 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 A0A087WXM4 84 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 LOC102724200A0A096LPH7 203 aaPredicted RBP8.01□□□□□ -1.13
CAPN3-202ENST00000337571 TRAV25A0A0B4J276 109 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 A0A1B0GW64 132 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 TMEM213A2RRL7 107 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 MEIS3P1A6NDR6 274 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 MFSD2BA6NFX1 497 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 A8MWP6 167 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 SNAPC5O75971 98 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 RPA2P15927 270 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 PTBP1P26599 531 aaKnown RBP eCLIP8.01□□□□□ -1.13
CAPN3-202ENST00000337571 GPR183P32249 361 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 RPL5P46777 297 aaKnown RBP8.01□□□□□ -1.13
CAPN3-202ENST00000337571 ELLP55199 621 aaPredicted RBP8.01□□□□□ -1.13
CAPN3-202ENST00000337571 POU2AF1Q16633 256 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 KLK9Q2XQG4 91 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 TM4SF20Q53R12 229 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 DHRS11Q6UWP2 260 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 ZNF818PQ6ZRF7 136 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 TMEM61Q8N0U2 210 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 OR1L8Q8NGR8 309 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 VN1R17PQ8TDU5 208 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 HINT2Q9BX68 163 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 WFDC10AQ9H1F0 79 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 MLXQ9UH92 298 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 KLK9Q9UKQ9 250 aa8.01□□□□□ -1.13
CAPN3-202ENST00000337571 TRAV3A0A0B4J244 114 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 TEX50A0A1B0GTY4 177 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 IGLC7A0M8Q6 106 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 CGB1A6NKQ9 187 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 S1PR2O95136 353 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 PMP2P02689 132 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 SERPINE2P07093 398 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 FGF2P09038 288 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 OR13C7P0DN81 318 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 F2RP25116 425 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 S100GP29377 79 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 GNRHRP30968 328 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 RFX2P48378 723 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 TAS2R46P59540 309 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 UBE2NLQ5JXB2 153 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 TMEM69Q5SWH9 247 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 LAMTOR1Q6IAA8 161 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 BTNL8Q6UX41 500 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 OR2C3Q8N628 320 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 OR10W1Q8NGF6 305 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 OR1L6Q8NGR2 347 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 OR5H2Q8NGV7 314 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 OR6F1Q8NGZ6 308 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 ZNF502Q8TBZ5 544 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 ZNF2Q9BSG1 426 aaPredicted RBP8□□□□□ -1.13
CAPN3-202ENST00000337571 GGTLC1Q9BX51 225 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 VCX3AQ9NNX9 186 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 FKBP11Q9NYL4 201 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 COMMD9Q9P000 198 aa8□□□□□ -1.13
CAPN3-202ENST00000337571 RYR2Q92736 4967 aa7.99□□□□□ -1.13
CAPN3-202ENST00000337571 IGHV3-35A0A0C4DH35 117 aa7.99□□□□□ -1.13
CAPN3-202ENST00000337571 SMIM31A0A1B0GVY4 71 aa7.99□□□□□ -1.13
CAPN3-202ENST00000337571 MARCH11A6NNE9 402 aa7.99□□□□□ -1.13
CAPN3-202ENST00000337571 TGOLN2O43493 480 aa7.99□□□□□ -1.13
CAPN3-202ENST00000337571 PGLYRP1O75594 196 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-202ENST00000337571 KRASP01116 189 aa7.99□□□□□ -1.13
CAPN3-202ENST00000337571 RLN1P04808 185 aa7.99□□□□□ -1.13
CAPN3-202ENST00000337571 C8orf88P0DMB2 117 aa7.99□□□□□ -1.13
CAPN3-202ENST00000337571 PRSS3P35030 304 aa7.99□□□□□ -1.13
CAPN3-202ENST00000337571 LPAR6P43657 344 aa7.99□□□□□ -1.13
CAPN3-202ENST00000337571 LPCAT3Q6P1A2 487 aa7.99□□□□□ -1.13
CAPN3-202ENST00000337571 SPSB3Q6PJ21 355 aa7.99□□□□□ -1.13
CAPN3-202ENST00000337571 UNQ9165/PRO28630Q6UXU0 137 aa7.99□□□□□ -1.13
CAPN3-202ENST00000337571 SAMD12Q8N8I0 201 aa7.99□□□□□ -1.13
CAPN3-202ENST00000337571 GDPD1Q8N9F7 314 aa7.99□□□□□ -1.13
CAPN3-202ENST00000337571 DGCR14Q96DF8 476 aaKnown RBP7.99□□□□□ -1.13
CAPN3-202ENST00000337571 BSCL2Q96G97 398 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-202ENST00000337571 TMEM56Q96MV1 263 aa7.99□□□□□ -1.13
CAPN3-202ENST00000337571 C5orf66Q9H5L9 145 aa7.99□□□□□ -1.13
CAPN3-202ENST00000337571 OR51B2Q9Y5P1 312 aa7.99□□□□□ -1.13
CAPN3-202ENST00000337571 OR2T8A6NH00 312 aa7.98□□□□□ -1.13
CAPN3-202ENST00000337571 RPS19P39019 145 aaKnown RBP7.98□□□□□ -1.13
CAPN3-202ENST00000337571 APOC4P55056 127 aa7.98□□□□□ -1.13
CAPN3-202ENST00000337571 TAS2R20P59543 309 aa7.98□□□□□ -1.13
CAPN3-202ENST00000337571 TSPAN5P62079 268 aa7.98□□□□□ -1.13
CAPN3-202ENST00000337571 UBAC2Q8NBM4 344 aa7.98□□□□□ -1.13
CAPN3-202ENST00000337571 LSM10Q969L4 123 aaKnown RBP7.98□□□□□ -1.13
CAPN3-202ENST00000337571 MOB3AQ96BX8 217 aa7.98□□□□□ -1.13
CAPN3-202ENST00000337571 SPAG8Q99932 426 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-202ENST00000337571 C20orf24Q9BUV8 137 aa7.98□□□□□ -1.13
CAPN3-202ENST00000337571 ZNF436Q9C0F3 470 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-202ENST00000337571 NAA50Q9GZZ1 169 aaKnown RBP7.98□□□□□ -1.13
CAPN3-202ENST00000337571 PRNDQ9UKY0 176 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms