RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 LOC102723996A0A087X1L8 192 aa11.59□□□□□ -0.55
RTN4-202ENST00000337526 IGHV3-35A0A0C4DH35 117 aa11.59□□□□□ -0.55
RTN4-202ENST00000337526 ID1P41134 155 aa11.59□□□□□ -0.55
RTN4-202ENST00000337526 RPL23P62829 140 aaKnown RBP11.59□□□□□ -0.55
RTN4-202ENST00000337526 SCN8AQ9UQD0 1980 aa11.59□□□□□ -0.55
RTN4-202ENST00000337526 LINC00587B1AMM8 73 aa11.58□□□□□ -0.56
RTN4-202ENST00000337526 EFNA2O43921 213 aa11.58□□□□□ -0.56
RTN4-202ENST00000337526 CTAG1AP78358 180 aa11.58□□□□□ -0.56
RTN4-202ENST00000337526 OR1N2Q8NGR9 330 aa11.58□□□□□ -0.56
RTN4-202ENST00000337526 OR10J6PQ8NGY7 276 aa11.58□□□□□ -0.56
RTN4-202ENST00000337526 PRDM6Q9NQX0 595 aa11.58□□□□□ -0.56
RTN4-202ENST00000337526 PF4V1P10720 104 aa11.58□□□□□ -0.56
RTN4-202ENST00000337526 HBBP68871 147 aa11.58□□□□□ -0.56
RTN4-202ENST00000337526 MAP1LC3AQ9H492 121 aa11.58□□□□□ -0.56
RTN4-202ENST00000337526 IL4P05112 153 aa11.58□□□□□ -0.56
RTN4-202ENST00000337526 CCL20P78556 96 aa11.58□□□□□ -0.56
RTN4-202ENST00000337526 MBNL2Q5VZF2 373 aaKnown RBP11.58□□□□□ -0.56
RTN4-202ENST00000337526 LHFPL1Q86WI0 220 aa11.58□□□□□ -0.56
RTN4-202ENST00000337526 FAM216BQ8N7L0 139 aa11.58□□□□□ -0.56
RTN4-202ENST00000337526 GTF3AQ92664 365 aaKnown RBP11.58□□□□□ -0.56
RTN4-202ENST00000337526 RNF115Q9Y4L5 304 aa11.58□□□□□ -0.56
RTN4-202ENST00000337526 SHANK1Q9Y566 2161 aa11.58□□□□□ -0.56
RTN4-202ENST00000337526 ATRXP46100 2492 aa11.58□□□□□ -0.56
RTN4-202ENST00000337526 GCSHP23434 173 aa11.58□□□□□ -0.56
RTN4-202ENST00000337526 GFRA1P56159 465 aa11.58□□□□□ -0.56
RTN4-202ENST00000337526 RALYQ9UKM9 306 aaKnown RBP11.58□□□□□ -0.56
RTN4-202ENST00000337526 A0A0G2JMZ2 1700 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 LRRC37A2A6NM11 1700 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 IGHV1-69-2A0A0G2JMI3 117 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 H3BVH4 76 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 CELA3BP08861 270 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 RPS20P60866 119 aaKnown RBP11.57□□□□□ -0.56
RTN4-202ENST00000337526 FAM27E3Q08E93 113 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 KCNS1Q96KK3 526 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 KLHDC3Q9BQ90 382 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 MRPS18CQ9Y3D5 142 aaKnown RBP11.57□□□□□ -0.56
RTN4-202ENST00000337526 PI4KAP42356 2102 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 FABP2P12104 132 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 SUPT4H1P63272 117 aaKnown RBP11.57□□□□□ -0.56
RTN4-202ENST00000337526 RAB37Q96AX2 223 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 MYO7BQ6PIF6 2116 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 PHF3Q92576 2039 aaKnown RBP11.57□□□□□ -0.56
RTN4-202ENST00000337526 KBTBD11-OT1A0A1B0GTJ5 212 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 CD55P08174 381 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 ANOS1P23352 680 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 UCNP55089 124 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 CFHR1Q03591 330 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 TM4SF20Q53R12 229 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 PNKDQ8N490 385 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 WNT10AQ9GZT5 417 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 ANK1P16157 1881 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 FER1L5A0AVI2 2057 aa11.57□□□□□ -0.56
RTN4-202ENST00000337526 TFPI2P48307 235 aa11.56□□□□□ -0.56
RTN4-202ENST00000337526 HERPUD1Q15011 391 aa11.56□□□□□ -0.56
RTN4-202ENST00000337526 PARD6GQ9BYG4 376 aaPredicted RBP11.56□□□□□ -0.56
RTN4-202ENST00000337526 DOCK7Q96N67 2140 aa11.56□□□□□ -0.56
RTN4-202ENST00000337526 IGKV1-12A0A0C4DH73 117 aa11.56□□□□□ -0.56
RTN4-202ENST00000337526 LDLRAD4O15165 306 aa11.56□□□□□ -0.56
RTN4-202ENST00000337526 IGKV1D-12P01611 117 aa11.56□□□□□ -0.56
RTN4-202ENST00000337526 LIPFP07098 398 aa11.56□□□□□ -0.56
RTN4-202ENST00000337526 IGHV1-2P23083 117 aa11.56□□□□□ -0.56
RTN4-202ENST00000337526 GATA2P23769 480 aaPredicted RBP11.56□□□□□ -0.56
RTN4-202ENST00000337526 TNFSF10P50591 281 aa11.56□□□□□ -0.56
RTN4-202ENST00000337526 LRTM2Q8N967 370 aa11.56□□□□□ -0.56
RTN4-202ENST00000337526 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.56□□□□□ -0.56
RTN4-202ENST00000337526 TMEM70Q9BUB7 260 aa11.56□□□□□ -0.56
RTN4-202ENST00000337526 TBL2Q9Y4P3 447 aaKnown RBP11.56□□□□□ -0.56
RTN4-202ENST00000337526 AUP1Q9Y679 476 aa11.56□□□□□ -0.56
RTN4-202ENST00000337526 DIDO1Q9BTC0 2240 aaKnown RBP11.56□□□□□ -0.56
RTN4-202ENST00000337526 IGHV2OR16-5A0A0B4J2B6 119 aa11.56□□□□□ -0.56
RTN4-202ENST00000337526 A0A1W2PS18 150 aa11.56□□□□□ -0.56
RTN4-202ENST00000337526 PSG9Q00887 426 aa11.56□□□□□ -0.56
RTN4-202ENST00000337526 TRAV24A0A0B4J272 114 aa11.56□□□□□ -0.56
RTN4-202ENST00000337526 IQCF6A8MYZ5 107 aa11.56□□□□□ -0.56
RTN4-202ENST00000337526 LHX2P50458 406 aa11.56□□□□□ -0.56
RTN4-202ENST00000337526 ACSF3Q4G176 576 aaPredicted RBP11.56□□□□□ -0.56
RTN4-202ENST00000337526 FAM166AQ6J272 317 aa11.56□□□□□ -0.56
RTN4-202ENST00000337526 C1orf162Q8NEQ5 155 aaPredicted RBP11.56□□□□□ -0.56
RTN4-202ENST00000337526 WFDC1Q9HC57 220 aa11.56□□□□□ -0.56
RTN4-202ENST00000337526 CD5P06127 495 aa11.55□□□□□ -0.56
RTN4-202ENST00000337526 LINC00271P0C7V0 271 aa11.55□□□□□ -0.56
RTN4-202ENST00000337526 RELQ04864 619 aaPredicted RBP11.55□□□□□ -0.56
RTN4-202ENST00000337526 CX3CL1P78423 397 aa11.55□□□□□ -0.56
RTN4-202ENST00000337526 TBR1Q16650 682 aa11.55□□□□□ -0.56
RTN4-202ENST00000337526 OR4D5Q8NGN0 318 aa11.55□□□□□ -0.56
RTN4-202ENST00000337526 PHLDA3Q9Y5J5 127 aa11.55□□□□□ -0.56
RTN4-202ENST00000337526 LOC107984156A0A0G2JMH3 177 aa11.55□□□□□ -0.56
RTN4-202ENST00000337526 NPIPB11E5RHQ5 1161 aa11.55□□□□□ -0.56
RTN4-202ENST00000337526 ARL17AQ8IVW1 177 aa11.55□□□□□ -0.56
RTN4-202ENST00000337526 PCNX1Q96RV3 2341 aa11.55□□□□□ -0.56
RTN4-202ENST00000337526 TMEM238LA0A1B0GVL6 79 aa11.55□□□□□ -0.56
RTN4-202ENST00000337526 A6NJY4 79 aa11.55□□□□□ -0.56
RTN4-202ENST00000337526 C1QTNF9BB2RNN3 333 aa11.55□□□□□ -0.56
RTN4-202ENST00000337526 TM4SF5O14894 197 aa11.55□□□□□ -0.56
RTN4-202ENST00000337526 HIST1H2BKO60814 126 aa11.55□□□□□ -0.56
RTN4-202ENST00000337526 HIST1H2BJP06899 126 aa11.55□□□□□ -0.56
RTN4-202ENST00000337526 CRYGSP22914 178 aa11.55□□□□□ -0.56
RTN4-202ENST00000337526 HIST1H2BOP23527 126 aa11.55□□□□□ -0.56
RTN4-202ENST00000337526 HIST1H2BBP33778 126 aa11.55□□□□□ -0.56
RTN4-202ENST00000337526 HIST1H2BDP58876 126 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms