RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 RUSC1-AS1Q66K80 236 aa7.21□□□□□ -1.25
SNCA-201ENST00000336904 OR9G1Q8NH87 305 aa7.21□□□□□ -1.25
SNCA-201ENST00000336904 OR2T6Q8NHC8 308 aa7.21□□□□□ -1.25
SNCA-201ENST00000336904 ZNF714Q96N38 554 aa7.21□□□□□ -1.25
SNCA-201ENST00000336904 EGLN1Q9GZT9 426 aa7.21□□□□□ -1.25
SNCA-201ENST00000336904 UNKLQ9H9P5 680 aaKnown RBP7.21□□□□□ -1.25
SNCA-201ENST00000336904 WDR83OSQ9Y284 106 aa7.21□□□□□ -1.25
SNCA-201ENST00000336904 ZFYVE26Q68DK2 2539 aa7.21□□□□□ -1.26
SNCA-201ENST00000336904 IGKV1OR2-108A0A075B7D4 117 aa7.21□□□□□ -1.26
SNCA-201ENST00000336904 TRAV1-1A0A0B4J248 108 aa7.21□□□□□ -1.26
SNCA-201ENST00000336904 hADV38S2A0JD32 116 aa7.21□□□□□ -1.26
SNCA-201ENST00000336904 K7ENP7 123 aa7.21□□□□□ -1.26
SNCA-201ENST00000336904 CCL21O00585 134 aa7.21□□□□□ -1.26
SNCA-201ENST00000336904 C1QTNF9P0C862 333 aa7.21□□□□□ -1.26
SNCA-201ENST00000336904 B2MP61769 119 aa7.21□□□□□ -1.26
SNCA-201ENST00000336904 RPL23P62829 140 aaKnown RBP7.21□□□□□ -1.26
SNCA-201ENST00000336904 LY6DQ14210 128 aa7.21□□□□□ -1.26
SNCA-201ENST00000336904 DPPA3Q6W0C5 159 aa7.21□□□□□ -1.26
SNCA-201ENST00000336904 STPG3Q8N7X2 389 aa7.21□□□□□ -1.26
SNCA-201ENST00000336904 CELSR2Q9HCU4 2923 aa7.21□□□□□ -1.26
SNCA-201ENST00000336904 SCO2A0A1W2PP80 73 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 SLC25A17O43808 307 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 IL6RP08887 468 aaPredicted RBP7.2□□□□□ -1.26
SNCA-201ENST00000336904 MEOX2P50222 304 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 RAB7AP51149 207 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 GNB1P62873 340 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 GNB2P62879 340 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 MIR17HGQ75NE6 70 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 SLC35E3Q7Z769 313 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 OR4P4Q8NGL7 312 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 FRZBQ92765 325 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 FAM210BQ96KR6 192 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 HIST1H2BKO60814 126 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 IFNA1P01562 189 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 HIST1H2BJP06899 126 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 HIST1H2BOP23527 126 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 HIST1H2BBP33778 126 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 HIST1H2BDP58876 126 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 HIST1H2BCP62807 126 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 HIST2H2BEQ16778 126 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 ACOT6Q3I5F7 207 aaPredicted RBP7.2□□□□□ -1.26
SNCA-201ENST00000336904 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.2□□□□□ -1.26
SNCA-201ENST00000336904 HCP5Q6MZN7 132 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 SLC25A48Q6ZT89 311 aaKnown RBP7.2□□□□□ -1.26
SNCA-201ENST00000336904 C1orf87Q8N0U7 546 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 HIST1H2BHQ93079 126 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 HIST1H2BNQ99877 126 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 HIST1H2BMQ99879 126 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 PLEKHA3Q9HB20 300 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 YTHDF2Q9Y5A9 579 aaKnown RBP7.2□□□□□ -1.26
SNCA-201ENST00000336904 FLNCQ14315 2725 aa7.2□□□□□ -1.26
SNCA-201ENST00000336904 PIGBOS1A0A0B4J2F0 54 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 TEX50A0A1B0GTY4 177 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 IFITM10A6NMD0 228 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 ZNF729A6NN14 1252 aaPredicted RBP7.19□□□□□ -1.26
SNCA-201ENST00000336904 PRSS46E5RG02 174 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 C17orf112F2Z3M2 114 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 NDUFB3O43676 98 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 HSPE1P61604 102 aaKnown RBP7.19□□□□□ -1.26
SNCA-201ENST00000336904 TMEM241Q24JQ0 296 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 CR1LQ2VPA4 569 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 BSXQ3C1V8 233 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 FAM78BQ5VT40 261 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 MORN5Q5VZ52 161 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 NUP37Q8NFH4 326 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 UHRF2Q96PU4 802 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 PCGF1Q9BSM1 259 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 NIT2Q9NQR4 276 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 CFAP46Q8IYW2 2715 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 PKD1L2Q7Z442 2459 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 TRBV20OR9-2A0A075B6H5 130 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 TRAV5A0A0B4J249 113 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 A0A1B0GUS0 222 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 FOLR2P14207 255 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 LOXP28300 417 aaPredicted RBP7.19□□□□□ -1.26
SNCA-201ENST00000336904 ATP6V1FQ16864 119 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 OR10A7Q8NGE5 316 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 GPR61Q9BZJ8 451 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 GSX1Q9H4S2 264 aaPredicted RBP7.19□□□□□ -1.26
SNCA-201ENST00000336904 TMEM14BQ9NUH8 114 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 TRBV23-1A0A0A0MS06 115 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 IGHV1-69-2A0A0G2JMI3 117 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 H3BTX0 84 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 SPINK4O60575 86 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 TRGC1P0CF51 173 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 OR10J1P30954 320 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 RTL8BQ17RB0 113 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 TEX36Q5VZQ5 186 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 C1orf174Q8IYL3 243 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 MRPL36Q9P0J6 103 aaKnown RBP7.19□□□□□ -1.26
SNCA-201ENST00000336904 LINC00312Q9Y6C7 94 aa7.19□□□□□ -1.26
SNCA-201ENST00000336904 CLDN34H7C241 214 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 AP4M1O00189 453 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 KBTBD11O94819 623 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 SOD3P08294 240 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 EFNB3Q15768 340 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 VWC2Q2TAL6 325 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 LRRC10Q5BKY1 277 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 NHLRC2Q8NBF2 726 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 SGK494Q96LW2 274 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms