RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 ZNF257Q9Y2Q1 563 aa11.04□□□□□ -0.64
APOBEC3B-202ENST00000335760 A0A1B0GU03 582 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 IFNA21P01568 189 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 IFNA17P01571 189 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 PPIFP30405 207 aaKnown RBP11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 HSPE1P61604 102 aaKnown RBP11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 SRSF4Q08170 494 aaKnown RBP11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 TET2Q6N021 2002 aaPredicted RBP11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 ZNF429Q86V71 674 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 C3orf56Q8N813 242 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 C11orf44Q8N8P7 122 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 OR5T1Q8NG75 326 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 OR10W1Q8NGF6 305 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 TMEM68Q96MH6 324 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 PDCD10Q9BUL8 212 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 SNRPGP15A8MWD9 76 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 NXPH3O95157 252 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 IGHG4P01861 327 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 CD28P10747 220 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 AREGP15514 252 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 OXA1LQ15070 435 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 SPINK9Q5DT21 86 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 HIST2H2BDQ6DRA6 164 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 THOC7Q6I9Y2 204 aaKnown RBP11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 TEX38Q6PEX7 206 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 COMMD1Q8N668 190 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 OR4X2Q8NGF9 303 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 OR1S1Q8NH92 325 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 COA4Q9NYJ1 87 aa11.03□□□□□ -0.64
APOBEC3B-202ENST00000335760 IGLC7A0M8Q6 106 aa11.02□□□□□ -0.65
APOBEC3B-202ENST00000335760 MPTX1A8MV57 137 aa11.02□□□□□ -0.65
APOBEC3B-202ENST00000335760 SOX15O60248 233 aa11.02□□□□□ -0.65
APOBEC3B-202ENST00000335760 FBXO24O75426 580 aa11.02□□□□□ -0.65
APOBEC3B-202ENST00000335760 IGLV1-40P01703 118 aa11.02□□□□□ -0.65
APOBEC3B-202ENST00000335760 REG1AP05451 166 aa11.02□□□□□ -0.65
APOBEC3B-202ENST00000335760 PF4V1P10720 104 aa11.02□□□□□ -0.65
APOBEC3B-202ENST00000335760 SLC25A6P12236 298 aa11.02□□□□□ -0.65
APOBEC3B-202ENST00000335760 PRCDQ00LT1 54 aa11.02□□□□□ -0.65
APOBEC3B-202ENST00000335760 FOXE3Q13461 319 aa11.02□□□□□ -0.65
APOBEC3B-202ENST00000335760 TATDN3Q17R31 274 aa11.02□□□□□ -0.65
APOBEC3B-202ENST00000335760 AARDQ4LEZ3 155 aa11.02□□□□□ -0.65
APOBEC3B-202ENST00000335760 TTC9CQ8N5M4 171 aa11.02□□□□□ -0.65
APOBEC3B-202ENST00000335760 OR5M8Q8NGP6 311 aa11.02□□□□□ -0.65
APOBEC3B-202ENST00000335760 FAM110DQ8TAY7 271 aaPredicted RBP11.02□□□□□ -0.65
APOBEC3B-202ENST00000335760 SRSF8Q9BRL6 282 aaKnown RBP11.02□□□□□ -0.65
APOBEC3B-202ENST00000335760 ZNF747Q9BV97 191 aa11.02□□□□□ -0.65
APOBEC3B-202ENST00000335760 ZNF355PQ9NSJ1 428 aa11.02□□□□□ -0.65
APOBEC3B-202ENST00000335760 C13orf42A0A1B0GVH6 325 aa11.01□□□□□ -0.65
APOBEC3B-202ENST00000335760 CCSO14618 274 aa11.01□□□□□ -0.65
APOBEC3B-202ENST00000335760 ELANEP08246 267 aa11.01□□□□□ -0.65
APOBEC3B-202ENST00000335760 PSMB6P28072 239 aa11.01□□□□□ -0.65
APOBEC3B-202ENST00000335760 SPCS3P61009 180 aa11.01□□□□□ -0.65
APOBEC3B-202ENST00000335760 WT1-ASQ06250 92 aa11.01□□□□□ -0.65
APOBEC3B-202ENST00000335760 TCTEX1D4Q5JR98 221 aa11.01□□□□□ -0.65
APOBEC3B-202ENST00000335760 TMEM65Q6PI78 240 aa11.01□□□□□ -0.65
APOBEC3B-202ENST00000335760 LCNL1Q6ZST4 164 aa11.01□□□□□ -0.65
APOBEC3B-202ENST00000335760 HSD17B13Q7Z5P4 300 aaPredicted RBP11.01□□□□□ -0.65
APOBEC3B-202ENST00000335760 OR52E5Q8NH55 327 aa11.01□□□□□ -0.65
APOBEC3B-202ENST00000335760 MS4A10Q96PG2 267 aa11.01□□□□□ -0.65
APOBEC3B-202ENST00000335760 PLEKHA3Q9HB20 300 aa11.01□□□□□ -0.65
APOBEC3B-202ENST00000335760 ALG5Q9Y673 324 aa11.01□□□□□ -0.65
APOBEC3B-202ENST00000335760 TCRBV4S1A1TA0A5B7 111 aa11□□□□□ -0.65
APOBEC3B-202ENST00000335760 NPIPB5A8MRT5 1133 aa11□□□□□ -0.65
APOBEC3B-202ENST00000335760 FAM25EA8MYX2 175 aa11□□□□□ -0.65
APOBEC3B-202ENST00000335760 SSNA1O43805 119 aa11□□□□□ -0.65
APOBEC3B-202ENST00000335760 PITX3O75364 302 aa11□□□□□ -0.65
APOBEC3B-202ENST00000335760 CRYGCP07315 174 aa11□□□□□ -0.65
APOBEC3B-202ENST00000335760 OR13C7P0DN81 318 aa11□□□□□ -0.65
APOBEC3B-202ENST00000335760 CTRB1P17538 263 aa11□□□□□ -0.65
APOBEC3B-202ENST00000335760 PSMB8P28062 276 aa11□□□□□ -0.65
APOBEC3B-202ENST00000335760 HOXA1P49639 335 aaPredicted RBP11□□□□□ -0.65
APOBEC3B-202ENST00000335760 IAH1Q2TAA2 248 aaPredicted RBP11□□□□□ -0.65
APOBEC3B-202ENST00000335760 CXorf66Q5JRM2 361 aaPredicted RBP11□□□□□ -0.65
APOBEC3B-202ENST00000335760 CTRB2Q6GPI1 263 aa11□□□□□ -0.65
APOBEC3B-202ENST00000335760 C19orf35Q6ZS72 473 aa11□□□□□ -0.65
APOBEC3B-202ENST00000335760 MRPL41Q8IXM3 137 aaKnown RBP11□□□□□ -0.65
APOBEC3B-202ENST00000335760 OR10C1Q96KK4 312 aa11□□□□□ -0.65
APOBEC3B-202ENST00000335760 CITED1Q99966 193 aa11□□□□□ -0.65
APOBEC3B-202ENST00000335760 KLK15Q9H2R5 256 aa11□□□□□ -0.65
APOBEC3B-202ENST00000335760 ENY2Q9NPA8 101 aa11□□□□□ -0.65
APOBEC3B-202ENST00000335760 CACFD1Q9UGQ2 172 aa11□□□□□ -0.65
APOBEC3B-202ENST00000335760 C7orf66A4D0T2 115 aa10.99□□□□□ -0.65
APOBEC3B-202ENST00000335760 C5orf51A6NDU8 294 aa10.99□□□□□ -0.65
APOBEC3B-202ENST00000335760 CEBPZOSA8MTT3 80 aa10.99□□□□□ -0.65
APOBEC3B-202ENST00000335760 H3BUA1 57 aa10.99□□□□□ -0.65
APOBEC3B-202ENST00000335760 PRH1P02810 166 aa10.99□□□□□ -0.65
APOBEC3B-202ENST00000335760 RPLP1P05386 114 aaKnown RBP10.99□□□□□ -0.65
APOBEC3B-202ENST00000335760 RAB9AP51151 201 aa10.99□□□□□ -0.65
APOBEC3B-202ENST00000335760 TNFRSF9Q07011 255 aa10.99□□□□□ -0.65
APOBEC3B-202ENST00000335760 C2orf68Q2NKX9 166 aa10.99□□□□□ -0.65
APOBEC3B-202ENST00000335760 PDLIM3Q53GG5 364 aaPredicted RBP10.99□□□□□ -0.65
APOBEC3B-202ENST00000335760 KHDC1LQ5JSQ8 128 aa10.99□□□□□ -0.65
APOBEC3B-202ENST00000335760 RNF152Q8N8N0 203 aa10.99□□□□□ -0.65
APOBEC3B-202ENST00000335760 CITED2Q99967 270 aaPredicted RBP10.99□□□□□ -0.65
APOBEC3B-202ENST00000335760 RBKSQ9H477 322 aa10.99□□□□□ -0.65
APOBEC3B-202ENST00000335760 HSPB7Q9UBY9 170 aa10.99□□□□□ -0.65
APOBEC3B-202ENST00000335760 GOSR2O14653 212 aa10.98□□□□□ -0.65
APOBEC3B-202ENST00000335760 TRGV3P03979 118 aa10.98□□□□□ -0.65
APOBEC3B-202ENST00000335760 DEFA4P12838 97 aa10.98□□□□□ -0.65
APOBEC3B-202ENST00000335760 TPPP2P59282 170 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms