RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 NPY1RP25929 384 aa19.47■□□□□ 0.71
TSKU-201ENST00000333090 RAB31Q13636 194 aa19.47■□□□□ 0.71
TSKU-201ENST00000333090 PSG5Q15238 335 aa19.47■□□□□ 0.71
TSKU-201ENST00000333090 SFXN3Q9BWM7 321 aa19.47■□□□□ 0.71
TSKU-201ENST00000333090 DCAF16Q9NXF7 216 aa19.47■□□□□ 0.71
TSKU-201ENST00000333090 TRGV5A0A0B4J1U4 118 aa19.46■□□□□ 0.71
TSKU-201ENST00000333090 TRBV9A0A0B4J1U6 114 aa19.46■□□□□ 0.71
TSKU-201ENST00000333090 ZNF134P52741 427 aa19.46■□□□□ 0.71
TSKU-201ENST00000333090 SLC24A4Q8NFF2 622 aa19.46■□□□□ 0.71
TSKU-201ENST00000333090 OR4B1Q8NGF8 309 aa19.46■□□□□ 0.71
TSKU-201ENST00000333090 LRRC29Q8WV35 223 aa19.46■□□□□ 0.71
TSKU-201ENST00000333090 PRDX2P32119 198 aa19.46■□□□□ 0.71
TSKU-201ENST00000333090 RNFT1Q5M7Z0 435 aa19.46■□□□□ 0.71
TSKU-201ENST00000333090 RCHY1Q96PM5 261 aa19.46■□□□□ 0.71
TSKU-201ENST00000333090 RNF2Q99496 336 aa19.46■□□□□ 0.71
TSKU-201ENST00000333090 HINT2Q9BX68 163 aa19.46■□□□□ 0.71
TSKU-201ENST00000333090 SPRY4Q9C004 299 aa19.46■□□□□ 0.71
TSKU-201ENST00000333090 NRN1Q9NPD7 142 aa19.46■□□□□ 0.71
TSKU-201ENST00000333090 TRAT1Q6PIZ9 186 aa19.45■□□□□ 0.7
TSKU-201ENST00000333090 AHRRA9YTQ3 701 aa19.45■□□□□ 0.7
TSKU-201ENST00000333090 SFTPCP11686 197 aa19.45■□□□□ 0.7
TSKU-201ENST00000333090 Q8N976 141 aa19.45■□□□□ 0.7
TSKU-201ENST00000333090 DUSP13Q9UII6 198 aa19.45■□□□□ 0.7
TSKU-201ENST00000333090 JPT1Q9UK76 154 aa19.45■□□□□ 0.7
TSKU-201ENST00000333090 CA2P00918 260 aa19.44■□□□□ 0.7
TSKU-201ENST00000333090 SUMO1P63165 101 aaKnown RBP19.44■□□□□ 0.7
TSKU-201ENST00000333090 CX3CL1P78423 397 aa19.44■□□□□ 0.7
TSKU-201ENST00000333090 SPATA45Q537H7 98 aa19.44■□□□□ 0.7
TSKU-201ENST00000333090 COL5A1-AS1Q5SY13 56 aa19.44■□□□□ 0.7
TSKU-201ENST00000333090 INO80CQ6PI98 192 aaPredicted RBP19.44■□□□□ 0.7
TSKU-201ENST00000333090 FAM216AQ8WUB2 273 aa19.44■□□□□ 0.7
TSKU-201ENST00000333090 IFI27L2Q9H2X8 130 aa19.44■□□□□ 0.7
TSKU-201ENST00000333090 TRGV8A0A0C4DH27 118 aa19.44■□□□□ 0.7
TSKU-201ENST00000333090 ZNF253O75346 499 aa19.44■□□□□ 0.7
TSKU-201ENST00000333090 LINC00614P0C842 121 aa19.44■□□□□ 0.7
TSKU-201ENST00000333090 RELQ04864 619 aaPredicted RBP19.44■□□□□ 0.7
TSKU-201ENST00000333090 MMDQ15546 238 aa19.44■□□□□ 0.7
TSKU-201ENST00000333090 FAM90A1Q86YD7 464 aa19.44■□□□□ 0.7
TSKU-201ENST00000333090 MDS2Q8NDY4 140 aa19.44■□□□□ 0.7
TSKU-201ENST00000333090 LEAP2Q969E1 77 aa19.44■□□□□ 0.7
TSKU-201ENST00000333090 FAM122AQ96E09 287 aa19.44■□□□□ 0.7
TSKU-201ENST00000333090 ENY2Q9NPA8 101 aa19.44■□□□□ 0.7
TSKU-201ENST00000333090 C15orf61A6NNL5 157 aa19.43■□□□□ 0.7
TSKU-201ENST00000333090 RPL19P84098 196 aaKnown RBP19.43■□□□□ 0.7
TSKU-201ENST00000333090 DMRTA1Q5VZB9 504 aa19.43■□□□□ 0.7
TSKU-201ENST00000333090 WDR73Q6P4I2 378 aa19.43■□□□□ 0.7
TSKU-201ENST00000333090 PPIAL4AQ9Y536 164 aa19.43■□□□□ 0.7
TSKU-201ENST00000333090 COL27A1Q8IZC6 1860 aaPredicted RBP19.43■□□□□ 0.7
TSKU-201ENST00000333090 EP300Q09472 2414 aaPredicted RBP19.43■□□□□ 0.7
TSKU-201ENST00000333090 MT-ND6P03923 174 aa19.43■□□□□ 0.7
TSKU-201ENST00000333090 MYOD1P15172 320 aa19.43■□□□□ 0.7
TSKU-201ENST00000333090 AREGP15514 252 aa19.43■□□□□ 0.7
TSKU-201ENST00000333090 MRPL54Q6P161 138 aaKnown RBP19.43■□□□□ 0.7
TSKU-201ENST00000333090 TMEM136Q6ZRR5 245 aa19.43■□□□□ 0.7
TSKU-201ENST00000333090 C1orf229Q6ZS94 237 aaPredicted RBP19.43■□□□□ 0.7
TSKU-201ENST00000333090 C1orf174Q8IYL3 243 aa19.43■□□□□ 0.7
TSKU-201ENST00000333090 KCNS1Q96KK3 526 aa19.43■□□□□ 0.7
TSKU-201ENST00000333090 IL19Q9UHD0 177 aa19.43■□□□□ 0.7
TSKU-201ENST00000333090 A0A1W2PS18 150 aa19.42■□□□□ 0.7
TSKU-201ENST00000333090 CRYABP02511 175 aaKnown RBP19.42■□□□□ 0.7
TSKU-201ENST00000333090 MRPS11P82912 194 aaKnown RBP19.42■□□□□ 0.7
TSKU-201ENST00000333090 PRR20EP86478 221 aa19.42■□□□□ 0.7
TSKU-201ENST00000333090 PRR20CP86479 221 aa19.42■□□□□ 0.7
TSKU-201ENST00000333090 PRR20DP86480 221 aa19.42■□□□□ 0.7
TSKU-201ENST00000333090 PRR20BP86481 221 aa19.42■□□□□ 0.7
TSKU-201ENST00000333090 PRR20AP86496 221 aa19.42■□□□□ 0.7
TSKU-201ENST00000333090 TIGITQ495A1 244 aa19.42■□□□□ 0.7
TSKU-201ENST00000333090 UTF1Q5T230 341 aa19.42■□□□□ 0.7
TSKU-201ENST00000333090 STARD4Q96DR4 205 aa19.42■□□□□ 0.7
TSKU-201ENST00000333090 GCM1Q9NP62 436 aa19.42■□□□□ 0.7
TSKU-201ENST00000333090 TTC28Q96AY4 2481 aa19.42■□□□□ 0.7
TSKU-201ENST00000333090 SRIP30626 198 aa19.42■□□□□ 0.7
TSKU-201ENST00000333090 HOXC12P31275 282 aa19.42■□□□□ 0.7
TSKU-201ENST00000333090 RAB7AP51149 207 aa19.42■□□□□ 0.7
TSKU-201ENST00000333090 DHRS13Q6UX07 377 aa19.42■□□□□ 0.7
TSKU-201ENST00000333090 OR4S2Q8NH73 311 aa19.42■□□□□ 0.7
TSKU-201ENST00000333090 ZNF83P51522 516 aa19.41■□□□□ 0.7
TSKU-201ENST00000333090 CNEP1R1Q8N9A8 125 aa19.41■□□□□ 0.7
TSKU-201ENST00000333090 OR7C2O60412 319 aa19.41■□□□□ 0.7
TSKU-201ENST00000333090 CD46P15529 392 aa19.41■□□□□ 0.7
TSKU-201ENST00000333090 LOXL3P58215 753 aa19.41■□□□□ 0.7
TSKU-201ENST00000333090 OR10J3Q5JRS4 329 aa19.41■□□□□ 0.7
TSKU-201ENST00000333090 OR4A47Q6IF82 309 aa19.41■□□□□ 0.7
TSKU-201ENST00000333090 IGKV1D-17A0A075B6S4 117 aa19.4■□□□□ 0.7
TSKU-201ENST00000333090 LINC00869P0C866 280 aa19.4■□□□□ 0.7
TSKU-201ENST00000333090 CTRLP40313 264 aa19.4■□□□□ 0.7
TSKU-201ENST00000333090 NABP2Q9BQ15 211 aa19.4■□□□□ 0.7
TSKU-201ENST00000333090 SERTAD4Q9NUC0 356 aa19.4■□□□□ 0.7
TSKU-201ENST00000333090 SLC45A2Q9UMX9 530 aa19.4■□□□□ 0.7
TSKU-201ENST00000333090 OR10J4P0C629 311 aa19.4■□□□□ 0.7
TSKU-201ENST00000333090 MGST1P10620 155 aaKnown RBP19.4■□□□□ 0.7
TSKU-201ENST00000333090 GATA2P23769 480 aaPredicted RBP19.4■□□□□ 0.7
TSKU-201ENST00000333090 HSPE1P61604 102 aaKnown RBP19.4■□□□□ 0.7
TSKU-201ENST00000333090 MOB3BQ86TA1 216 aa19.4■□□□□ 0.7
TSKU-201ENST00000333090 C11orf42Q8N5U0 333 aa19.4■□□□□ 0.7
TSKU-201ENST00000333090 ZNRF1Q8ND25 227 aa19.4■□□□□ 0.7
TSKU-201ENST00000333090 TMEM167BQ9NRX6 74 aa19.4■□□□□ 0.7
TSKU-201ENST00000333090 TNCP24821 2201 aa19.4■□□□□ 0.7
TSKU-201ENST00000333090 IGHV3OR15-7A0A075B7D8 119 aa19.39■□□□□ 0.7
TSKU-201ENST00000333090 CHRNB4P30926 498 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms