RNA–Protein interactions for RNA: ENST00000329410.3

C16orf54-201, Transcript of chromosome 16 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C16orf54, Length 2,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf54-201ENST00000329410 PMS2P5A8MQ11 134 aa12.88□□□□□ -0.35
C16orf54-201ENST00000329410 RAB29O14966 203 aa12.88□□□□□ -0.35
C16orf54-201ENST00000329410 PPBPP02775 128 aa12.88□□□□□ -0.35
C16orf54-201ENST00000329410 OR5G3P0C626 314 aa12.88□□□□□ -0.35
C16orf54-201ENST00000329410 SRP14P37108 136 aaKnown RBP12.88□□□□□ -0.35
C16orf54-201ENST00000329410 SERF2P84101 59 aa12.88□□□□□ -0.35
C16orf54-201ENST00000329410 TMEM41BQ5BJD5 291 aa12.88□□□□□ -0.35
C16orf54-201ENST00000329410 Q6ZWC4 215 aa12.88□□□□□ -0.35
C16orf54-201ENST00000329410 MBD3L1Q8WWY6 194 aa12.88□□□□□ -0.35
C16orf54-201ENST00000329410 TET2Q6N021 2002 aaPredicted RBP12.88□□□□□ -0.35
C16orf54-201ENST00000329410 KBTBD11O94819 623 aa12.88□□□□□ -0.35
C16orf54-201ENST00000329410 IFNA1P01562 189 aa12.88□□□□□ -0.35
C16orf54-201ENST00000329410 LOXL3P58215 753 aa12.88□□□□□ -0.35
C16orf54-201ENST00000329410 C1orf174Q8IYL3 243 aa12.88□□□□□ -0.35
C16orf54-201ENST00000329410 OR10P1Q8NGE3 313 aa12.88□□□□□ -0.35
C16orf54-201ENST00000329410 CMTM2Q8TAZ6 248 aa12.88□□□□□ -0.35
C16orf54-201ENST00000329410 Q8TCH9 128 aa12.88□□□□□ -0.35
C16orf54-201ENST00000329410 ANAPC16Q96DE5 110 aa12.88□□□□□ -0.35
C16orf54-201ENST00000329410 SLC25A22Q9H936 323 aa12.88□□□□□ -0.35
C16orf54-201ENST00000329410 DSCAML1Q8TD84 2053 aa12.88□□□□□ -0.35
C16orf54-201ENST00000329410 CLEC2AQ6UVW9 174 aa12.87□□□□□ -0.35
C16orf54-201ENST00000329410 RELNP78509 3460 aa12.87□□□□□ -0.35
C16orf54-201ENST00000329410 RAI1Q7Z5J4 1906 aaPredicted RBP12.87□□□□□ -0.35
C16orf54-201ENST00000329410 TIMP3P35625 211 aa12.87□□□□□ -0.35
C16orf54-201ENST00000329410 KCNIP4Q6PIL6 250 aa12.87□□□□□ -0.35
C16orf54-201ENST00000329410 SLC24A4Q8NFF2 622 aa12.87□□□□□ -0.35
C16orf54-201ENST00000329410 LHX4Q969G2 390 aa12.87□□□□□ -0.35
C16orf54-201ENST00000329410 SLC39A9Q9NUM3 307 aa12.87□□□□□ -0.35
C16orf54-201ENST00000329410 TRAPPC1Q9Y5R8 145 aa12.87□□□□□ -0.35
C16orf54-201ENST00000329410 LOC105371242A0A075B767 164 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 TRAV3A0A0B4J244 114 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 LHBP01229 141 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 TPPP2P59282 170 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 RPL15P61313 204 aaKnown RBP12.86□□□□□ -0.35
C16orf54-201ENST00000329410 PAFAH1B2P68402 229 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 LCN2P80188 198 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 FAM90A1Q86YD7 464 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 ZCCHC24Q8N2G6 241 aaKnown RBP12.86□□□□□ -0.35
C16orf54-201ENST00000329410 PPP1R35Q8TAP8 253 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 VN1R17PQ8TDU5 208 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 SNRNP40Q96DI7 357 aaKnown RBP12.86□□□□□ -0.35
C16orf54-201ENST00000329410 GCM1Q9NP62 436 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 MANBALQ9NQG1 85 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 CALYQ9NYX4 217 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 DYSFO75923 2080 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 IGLV3-9A0A075B6K5 115 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 CBY3A6NI87 242 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 TOMM40O96008 361 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 CFHR2P36980 270 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 PRAMEF5Q5TYX0 476 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 TRAT1Q6PIZ9 186 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 NUDT10Q8NFP7 164 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 RPUSD4Q96CM3 377 aaKnown RBP12.86□□□□□ -0.35
C16orf54-201ENST00000329410 TMEM147Q9BVK8 224 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 IFI27L2Q9H2X8 130 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 JPT1Q9UK76 154 aa12.86□□□□□ -0.35
C16orf54-201ENST00000329410 IGHV1-46P01743 117 aa12.85□□□□□ -0.35
C16orf54-201ENST00000329410 TNFAIP6P98066 277 aaPredicted RBP12.85□□□□□ -0.35
C16orf54-201ENST00000329410 GATAD1Q8WUU5 269 aa12.85□□□□□ -0.35
C16orf54-201ENST00000329410 CDKN1AP38936 164 aa12.85□□□□□ -0.35
C16orf54-201ENST00000329410 MAJINQ3KP22 176 aa12.85□□□□□ -0.35
C16orf54-201ENST00000329410 FAM57AQ8TBR7 257 aa12.85□□□□□ -0.35
C16orf54-201ENST00000329410 PINX1Q96BK5 328 aaKnown RBP12.85□□□□□ -0.35
C16orf54-201ENST00000329410 ABHD17AQ96GS6 310 aa12.85□□□□□ -0.35
C16orf54-201ENST00000329410 CCL13Q99616 98 aa12.85□□□□□ -0.35
C16orf54-201ENST00000329410 PXMP4Q9Y6I8 212 aa12.85□□□□□ -0.35
C16orf54-201ENST00000329410 GYPAP02724 150 aa12.84□□□□□ -0.35
C16orf54-201ENST00000329410 CD40P25942 277 aa12.84□□□□□ -0.35
C16orf54-201ENST00000329410 IL3RAP26951 378 aa12.84□□□□□ -0.35
C16orf54-201ENST00000329410 C17orf58Q2M2W7 97 aa12.84□□□□□ -0.35
C16orf54-201ENST00000329410 FFAR4Q5NUL3 377 aa12.84□□□□□ -0.35
C16orf54-201ENST00000329410 FAM216BQ8N7L0 139 aa12.84□□□□□ -0.35
C16orf54-201ENST00000329410 TCTEX1D1Q8N7M0 179 aa12.84□□□□□ -0.35
C16orf54-201ENST00000329410 OR2D3Q8NGH3 330 aa12.84□□□□□ -0.35
C16orf54-201ENST00000329410 SFXN3Q9BWM7 321 aa12.84□□□□□ -0.35
C16orf54-201ENST00000329410 SLC45A2Q9UMX9 530 aa12.84□□□□□ -0.35
C16orf54-201ENST00000329410 TANC2Q9HCD6 1990 aa12.84□□□□□ -0.35
C16orf54-201ENST00000329410 TLN1Q9Y490 2541 aaKnown RBP12.84□□□□□ -0.35
C16orf54-201ENST00000329410 C15orf62A8K5M9 175 aa12.84□□□□□ -0.35
C16orf54-201ENST00000329410 CCL8P80075 99 aa12.84□□□□□ -0.35
C16orf54-201ENST00000329410 MEF2BQ02080 365 aaPredicted RBP12.84□□□□□ -0.35
C16orf54-201ENST00000329410 LINC01551Q86U37 167 aa12.84□□□□□ -0.35
C16orf54-201ENST00000329410 OR10G9Q8NGN4 311 aa12.84□□□□□ -0.35
C16orf54-201ENST00000329410 OR10G7Q8NGN6 311 aa12.84□□□□□ -0.35
C16orf54-201ENST00000329410 HSPB9Q9BQS6 159 aa12.84□□□□□ -0.35
C16orf54-201ENST00000329410 NPCDR1Q9BY65 106 aa12.84□□□□□ -0.35
C16orf54-201ENST00000329410 PARD6GQ9BYG4 376 aaPredicted RBP12.84□□□□□ -0.35
C16orf54-201ENST00000329410 TNCP24821 2201 aa12.84□□□□□ -0.35
C16orf54-201ENST00000329410 F2RL2O00254 374 aa12.83□□□□□ -0.35
C16orf54-201ENST00000329410 CIDEAO60543 219 aa12.83□□□□□ -0.35
C16orf54-201ENST00000329410 CT45A1Q5HYN5 189 aa12.83□□□□□ -0.35
C16orf54-201ENST00000329410 OR4B1Q8NGF8 309 aa12.83□□□□□ -0.35
C16orf54-201ENST00000329410 OR4A16Q8NH70 328 aa12.83□□□□□ -0.35
C16orf54-201ENST00000329410 CT45A3Q8NHU0 189 aa12.83□□□□□ -0.35
C16orf54-201ENST00000329410 VPS25Q9BRG1 176 aa12.83□□□□□ -0.35
C16orf54-201ENST00000329410 ZNRD1Q9P1U0 126 aa12.83□□□□□ -0.35
C16orf54-201ENST00000329410 RNF7Q9UBF6 113 aa12.83□□□□□ -0.35
C16orf54-201ENST00000329410 LAMTOR2Q9Y2Q5 125 aa12.83□□□□□ -0.35
C16orf54-201ENST00000329410 A0A0G2JNJ9 132 aa12.83□□□□□ -0.36
C16orf54-201ENST00000329410 GCSAMLQ5JQS6 135 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms