RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 OR4P4Q8NGL7 312 aa13.18□□□□□ -0.3
PDLIM1-201ENST00000329399 OR1S2Q8NGQ3 325 aa13.18□□□□□ -0.3
PDLIM1-201ENST00000329399 DTD1Q8TEA8 209 aa13.18□□□□□ -0.3
PDLIM1-201ENST00000329399 ZDHHC16Q969W1 377 aa13.18□□□□□ -0.3
PDLIM1-201ENST00000329399 TSNAXQ99598 290 aaKnown RBP13.18□□□□□ -0.3
PDLIM1-201ENST00000329399 TMEM14BQ9NUH8 114 aa13.18□□□□□ -0.3
PDLIM1-201ENST00000329399 MED9Q9NWA0 146 aa13.18□□□□□ -0.3
PDLIM1-201ENST00000329399 STRAPQ9Y3F4 350 aaKnown RBP13.18□□□□□ -0.3
PDLIM1-201ENST00000329399 UPK2O00526 184 aa13.17□□□□□ -0.3
PDLIM1-201ENST00000329399 TMEM50AO95807 157 aa13.17□□□□□ -0.3
PDLIM1-201ENST00000329399 IFNA17P01571 189 aa13.17□□□□□ -0.3
PDLIM1-201ENST00000329399 OR9G9P0C7N8 305 aa13.17□□□□□ -0.3
PDLIM1-201ENST00000329399 COX7A1P24310 79 aa13.17□□□□□ -0.3
PDLIM1-201ENST00000329399 IZUMO4Q1ZYL8 232 aa13.17□□□□□ -0.3
PDLIM1-201ENST00000329399 VMA21Q3ZAQ7 101 aa13.17□□□□□ -0.3
PDLIM1-201ENST00000329399 OR5B3Q8NH48 314 aa13.17□□□□□ -0.3
PDLIM1-201ENST00000329399 RNF141Q8WVD5 230 aa13.17□□□□□ -0.3
PDLIM1-201ENST00000329399 HARBI1Q96MB7 349 aa13.17□□□□□ -0.3
PDLIM1-201ENST00000329399 JMJD8Q96S16 334 aa13.17□□□□□ -0.3
PDLIM1-201ENST00000329399 PARD6GQ9BYG4 376 aaPredicted RBP13.17□□□□□ -0.3
PDLIM1-201ENST00000329399 IGSF23A1L1A6 192 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 CEBPZOSA8MTT3 80 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 ODF3BA8MYP8 253 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 KCNAB3O43448 404 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 RNASE1P07998 156 aaKnown RBP13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 SEC11BP0C7V7 166 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 NHLH2Q02577 135 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 ALKAL2Q6UX46 152 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 TMEM14EPQ6UXP3 125 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 LHFPL4Q7Z7J7 247 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 DYNAPQ8N1N2 210 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 TEX45Q8NA69 505 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 PINX1Q96BK5 328 aaKnown RBP13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 GNPNAT1Q96EK6 184 aaPredicted RBP13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 GINS3Q9BRX5 216 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 ENY2Q9NPA8 101 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 TBL2Q9Y4P3 447 aaKnown RBP13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 PKD1L1Q8TDX9 2849 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 IGHV1-3A0A0C4DH29 117 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 CLDN34H7C241 214 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 KBTBD11O94819 623 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 ARG1P05089 322 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 CD1BP29016 333 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 IER3P46695 156 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 RAB5CP51148 216 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 RPS16P62249 146 aaKnown RBP13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 TPTE2P1Q5T6R2 138 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 RPL7L1Q6DKI1 246 aaKnown RBP13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 MRPL41Q8IXM3 137 aaKnown RBP13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 TMEM167AQ8TBQ9 72 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 SAT2Q96F10 170 aaPredicted RBP13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 ATP5SQ99766 215 aa13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 QTRT1Q9BXR0 403 aaKnown RBP13.16□□□□□ -0.3
PDLIM1-201ENST00000329399 TMEM89A2RUT3 159 aa13.15□□□□□ -0.3
PDLIM1-201ENST00000329399 INS-IGF2F8WCM5 200 aa13.15□□□□□ -0.3
PDLIM1-201ENST00000329399 IFNA5P01569 189 aa13.15□□□□□ -0.3
PDLIM1-201ENST00000329399 IGKV1-16P04430 117 aa13.15□□□□□ -0.3
PDLIM1-201ENST00000329399 S100A1P23297 94 aa13.15□□□□□ -0.3
PDLIM1-201ENST00000329399 MAS1LP35410 378 aa13.15□□□□□ -0.3
PDLIM1-201ENST00000329399 LGALS4P56470 323 aa13.15□□□□□ -0.3
PDLIM1-201ENST00000329399 SSX9Q7RTT3 188 aa13.15□□□□□ -0.3
PDLIM1-201ENST00000329399 OR5C1Q8NGR4 320 aa13.15□□□□□ -0.3
PDLIM1-201ENST00000329399 GGACTQ9BVM4 153 aa13.15□□□□□ -0.3
PDLIM1-201ENST00000329399 RPS10-NUDT3A0A1W2PQS6 291 aa13.14□□□□□ -0.31
PDLIM1-201ENST00000329399 FAM181BA6NEQ2 426 aa13.14□□□□□ -0.31
PDLIM1-201ENST00000329399 NUDT19A8MXV4 375 aa13.14□□□□□ -0.31
PDLIM1-201ENST00000329399 OR8U8P0C7N1 319 aa13.14□□□□□ -0.31
PDLIM1-201ENST00000329399 IAPPP10997 89 aa13.14□□□□□ -0.31
PDLIM1-201ENST00000329399 HABP2Q14520 560 aaPredicted RBP13.14□□□□□ -0.31
PDLIM1-201ENST00000329399 SPANXN5Q5MJ07 72 aa13.14□□□□□ -0.31
PDLIM1-201ENST00000329399 ZNRD1Q9P1U0 126 aa13.14□□□□□ -0.31
PDLIM1-201ENST00000329399 TCF19Q9Y242 345 aa13.14□□□□□ -0.31
PDLIM1-201ENST00000329399 FAM96BQ9Y3D0 163 aa13.14□□□□□ -0.31
PDLIM1-201ENST00000329399 OR51B2Q9Y5P1 312 aa13.14□□□□□ -0.31
PDLIM1-201ENST00000329399 NBEAL1Q6ZS30 2694 aa13.13□□□□□ -0.31
PDLIM1-201ENST00000329399 ATP6V1G1O75348 118 aa13.13□□□□□ -0.31
PDLIM1-201ENST00000329399 SAA1P0DJI8 122 aaPredicted RBP13.13□□□□□ -0.31
PDLIM1-201ENST00000329399 REG1BP48304 166 aa13.13□□□□□ -0.31
PDLIM1-201ENST00000329399 DYNLT3P51808 116 aa13.13□□□□□ -0.31
PDLIM1-201ENST00000329399 RAB11AP62491 216 aa13.13□□□□□ -0.31
PDLIM1-201ENST00000329399 MOB3BQ86TA1 216 aa13.13□□□□□ -0.31
PDLIM1-201ENST00000329399 OR10P1Q8NGE3 313 aa13.13□□□□□ -0.31
PDLIM1-201ENST00000329399 HEYLQ9NQ87 328 aaPredicted RBP13.13□□□□□ -0.31
PDLIM1-201ENST00000329399 SRRM4A7MD48 611 aaKnown RBP13.12□□□□□ -0.31
PDLIM1-201ENST00000329399 UMAD1C9J7I0 102 aa13.12□□□□□ -0.31
PDLIM1-201ENST00000329399 FGF16O43320 207 aa13.12□□□□□ -0.31
PDLIM1-201ENST00000329399 SOX15O60248 233 aa13.12□□□□□ -0.31
PDLIM1-201ENST00000329399 CST7O76096 145 aa13.12□□□□□ -0.31
PDLIM1-201ENST00000329399 NXPH3O95157 252 aa13.12□□□□□ -0.31
PDLIM1-201ENST00000329399 NMBP08949 121 aa13.12□□□□□ -0.31
PDLIM1-201ENST00000329399 SPP1P10451 314 aa13.12□□□□□ -0.31
PDLIM1-201ENST00000329399 VDAC2P45880 294 aaPredicted RBP13.12□□□□□ -0.31
PDLIM1-201ENST00000329399 RPL8P62917 257 aaKnown RBP13.12□□□□□ -0.31
PDLIM1-201ENST00000329399 BLOC1S1P78537 153 aa13.12□□□□□ -0.31
PDLIM1-201ENST00000329399 PRCDQ00LT1 54 aa13.12□□□□□ -0.31
PDLIM1-201ENST00000329399 VKORC1L1Q8N0U8 176 aa13.12□□□□□ -0.31
PDLIM1-201ENST00000329399 OR1L8Q8NGR8 309 aa13.12□□□□□ -0.31
PDLIM1-201ENST00000329399 PIFOQ8TCI5 191 aa13.12□□□□□ -0.31
PDLIM1-201ENST00000329399 SSMEM1Q8WWF3 244 aa13.12□□□□□ -0.31
PDLIM1-201ENST00000329399 MALSU1Q96EH3 234 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms