RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 NDUFA4L2Q9NRX3 87 aa8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 TNFSF18Q9UNG2 199 aa8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 WSB1Q9Y6I7 421 aa8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 M0QZK8 103 aa8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 TMEM50AO95807 157 aa8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 VDAC2P45880 294 aaPredicted RBP8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 EIF2B2P49770 351 aaKnown RBP8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 PAX9P55771 341 aa8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 ENY2Q9NPA8 101 aa8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 VPREB3Q9UKI3 123 aa8.14□□□□□ -1.11
VIPAS39-201ENST00000327028 A0A1W2PN81 502 aa8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 CGB1A6NKQ9 187 aa8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 INS-IGF2F8WCM5 200 aa8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 TSC22D2O75157 780 aa8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 OPN1MWP04001 364 aa8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 OPN1MW2P0DN77 364 aa8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 OPN1MW3P0DN78 364 aa8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 CHRNA7P36544 502 aa8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 NKX2-5P52952 324 aaPredicted RBP8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 RPL23AP62750 156 aaKnown RBP8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 ZNF562Q6V9R5 426 aa8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 ZNF546Q86UE3 836 aa8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 TMEM86BQ8N661 226 aa8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 SRSF12Q8WXF0 261 aaKnown RBP8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 HINT2Q9BX68 163 aa8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 LYRM2Q9NU23 88 aaPredicted RBP8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 MTORP42345 2549 aa8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 A0A1B0GW64 132 aa8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 ARPC5O15511 151 aa8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 HOXA3O43365 443 aaPredicted RBP8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 SRD5A1P18405 259 aa8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 CX3CL1P78423 397 aa8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 SRSF8Q9BRL6 282 aaKnown RBP8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 PSENENQ9NZ42 101 aa8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 NSD1Q96L73 2696 aaPredicted RBP8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 PLXNB1O43157 2135 aa8.13□□□□□ -1.11
VIPAS39-201ENST00000327028 RNF222A6NCQ9 220 aa8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 E7EUB6 86 aa8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 CNIH1O95406 144 aa8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 AMY1AP04745 511 aa8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 NUP62P37198 522 aaPredicted RBP8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 FXYD3Q14802 87 aa8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 MRPL41Q8IXM3 137 aaKnown RBP8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 C9orf62Q8N4C0 152 aa8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 OR2C3Q8N628 320 aa8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 INO80EQ8NBZ0 244 aaPredicted RBP8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 ARPC1AQ92747 370 aa8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 AQP10Q96PS8 301 aa8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 HIPK2Q9H2X6 1198 aa8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 GSX1Q9H4S2 264 aaPredicted RBP8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 HEYLQ9NQ87 328 aaPredicted RBP8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 IGHV7-81A0A0B4J1V7 117 aa8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 TEX22C9J3V5 150 aa8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 CAV2P51636 162 aa8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 NDPQ00604 133 aa8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 ZNF345Q14585 488 aa8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 RBMS3Q6XE24 437 aaKnown RBP8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 OR10W1Q8NGF6 305 aa8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 HSPB9Q9BQS6 159 aa8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 MFFQ9GZY8 342 aa8.12□□□□□ -1.11
VIPAS39-201ENST00000327028 IGLC7A0M8Q6 106 aa8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 MSGN1A6NI15 193 aa8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 H3BP45 60 aa8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 HKR1P10072 659 aa8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 CXCL2P19875 107 aa8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 RPL12P30050 165 aaKnown RBP8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 OR2F1Q13607 317 aa8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 ACOT7LQ6ZUV0 252 aa8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 HSD17B13Q7Z5P4 300 aaPredicted RBP8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 OR4C12Q96R67 309 aa8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 SLC25A31Q9H0C2 315 aa8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 F8P00451 2351 aa8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 IGSF23A1L1A6 192 aa8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 FAM24AA6NFZ4 105 aa8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 KCNAB3O43448 404 aa8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 RPP30P78346 268 aaKnown RBP8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 WT1-ASQ06250 92 aa8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 BSXQ3C1V8 233 aa8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 SPANXN5Q5MJ07 72 aa8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 LAMTOR1Q6IAA8 161 aa8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 TMEM14EPQ6UXP3 125 aa8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 TMEM252Q8N6L7 170 aa8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 STRAPQ9Y3F4 350 aaKnown RBP8.11□□□□□ -1.11
VIPAS39-201ENST00000327028 ERHP84090 104 aaKnown RBP8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 EWSR1Q01844 656 aaKnown RBP eCLIP8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 LGALSLQ3ZCW2 172 aaPredicted RBP8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 Q71RC1 249 aaPredicted RBP8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 KCNRGQ8N5I3 272 aa8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 SLC24A4Q8NFF2 622 aa8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 TNFRSF19Q9NS68 423 aa8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 U3KQ87 197 aa8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 A0A0D9SG52 128 aa8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 DNAJC9-AS1A6NH13 148 aa8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 SH2D7A6NKC9 451 aaPredicted RBP8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 C15orf62A8K5M9 175 aa8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 INAFM1C9JVW0 142 aa8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 IFNA10P01566 189 aa8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 OR13C7P0DN81 318 aa8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 HTR2BP41595 481 aa8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 ATP5IP56385 69 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms