RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 PLAUP00749 431 aa10.65□□□□□ -0.7
HMGCS1-201ENST00000325110 TIGITQ495A1 244 aa10.65□□□□□ -0.7
HMGCS1-201ENST00000325110 ACTL10Q5JWF8 245 aa10.65□□□□□ -0.7
HMGCS1-201ENST00000325110 PQLC2Q6ZP29 291 aa10.65□□□□□ -0.7
HMGCS1-201ENST00000325110 TCTEX1D1Q8N7M0 179 aa10.65□□□□□ -0.7
HMGCS1-201ENST00000325110 PARD6GQ9BYG4 376 aaPredicted RBP10.65□□□□□ -0.7
HMGCS1-201ENST00000325110 MRPL37Q9BZE1 423 aaKnown RBP10.65□□□□□ -0.7
HMGCS1-201ENST00000325110 EFNB3Q15768 340 aa10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 HLA-DRB5Q30154 266 aa10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 VN1R17PQ8TDU5 208 aa10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 SGK494Q96LW2 274 aa10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 HSPB9Q9BQS6 159 aa10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 DCAF16Q9NXF7 216 aa10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 C15orf65H3BRN8 121 aa10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 GGCTO75223 188 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 OPRK1P41145 380 aa10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 RELBQ01201 579 aa10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 WFDC8Q8IUA0 241 aa10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 COMMD5Q9GZQ3 224 aa10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 MRPL18Q9H0U6 180 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 TIMM8BQ9Y5J9 83 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 ZFHX4Q86UP3 3567 aa10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 SRRM5B3KS81 715 aa10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 MPDU1O75352 247 aa10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 GCGP01275 180 aa10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 HSPE1P61604 102 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 MSMPQ1L6U9 139 aa10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 PARD6AQ9NPB6 346 aa10.64□□□□□ -0.71
HMGCS1-201ENST00000325110 HELTA6NFD8 242 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 ENSAO43768 121 aaKnown RBP10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 NUPR1O60356 82 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 OR5G3P0C626 314 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 STAG3L2P0CL84 134 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 STAG3L3P0CL85 134 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 WT1P19544 449 aaPredicted RBP10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 ARSJQ5FYB0 599 aaPredicted RBP10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 CT45A1Q5HYN5 189 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 TEX38Q6PEX7 206 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 OR5R1Q8NH85 324 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 CT45A3Q8NHU0 189 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 RNASE7Q9H1E1 156 aaKnown RBP10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 IFI27L2Q9H2X8 130 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 NAV3Q8IVL0 2385 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 P0C879 139 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 CENPVQ7Z7K6 275 aaPredicted RBP10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 ZADH2Q8N4Q0 377 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 PRO3102Q9H379 93 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 NAGKQ9UJ70 344 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 TNFSF4P23510 183 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 CCKARP32238 428 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 RAB7AP51149 207 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 PRB3Q04118 309 aaPredicted RBP10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 RTL8BQ17RB0 113 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 CENPWQ5EE01 88 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 NABP2Q9BQ15 211 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 CEP295Q9C0D2 2601 aa10.63□□□□□ -0.71
HMGCS1-201ENST00000325110 IGHV3-21A0A0B4J1V1 117 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 FAM27E3Q08E93 113 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 DBX2Q6ZNG2 339 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 LHFPL4Q7Z7J7 247 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 OR10W1Q8NGF6 305 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 PRR7Q8TB68 274 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 STARD4Q96DR4 205 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 BTF3L4Q96K17 158 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 SSBP3Q9BWW4 388 aaPredicted RBP10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 EREGO14944 169 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 TCAPO15273 167 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 FRMD6-AS1P0C7T7 363 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 CHRNB4P30926 498 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 TPPP2P59282 170 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 LCN2P80188 198 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 RPEL1Q2QD12 228 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 DMRTC2Q8IXT2 367 aaPredicted RBP10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 MMD2Q8IY49 270 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 HARBI1Q96MB7 349 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 PYGO2Q9BRQ0 406 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 ELOVL5Q9NYP7 299 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 RNF7Q9UBF6 113 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 YPEL1O60688 119 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 SERF1AO75920 110 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 TOX4O94842 621 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 CA1P00915 261 aaPredicted RBP10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 IGKV1-16P04430 117 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 WNT2P09544 360 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 FTH1P19P0C7X4 201 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 RPL19P84098 196 aaKnown RBP10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 GBGT1Q8N5D6 347 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 OR9G1Q8NH87 305 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 YPEL2Q96QA6 119 aa10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 ZNF71Q9NQZ8 489 aaPredicted RBP10.62□□□□□ -0.71
HMGCS1-201ENST00000325110 C15orf61A6NNL5 157 aa10.61□□□□□ -0.71
HMGCS1-201ENST00000325110 AMTP48728 403 aa10.61□□□□□ -0.71
HMGCS1-201ENST00000325110 UBE2L3P68036 154 aaKnown RBP10.61□□□□□ -0.71
HMGCS1-201ENST00000325110 CYB5R2Q6BCY4 276 aa10.61□□□□□ -0.71
HMGCS1-201ENST00000325110 SIGLECL1Q8N7X8 197 aa10.61□□□□□ -0.71
HMGCS1-201ENST00000325110 CCL17Q92583 94 aa10.61□□□□□ -0.71
HMGCS1-201ENST00000325110 KMT2EQ8IZD2 1858 aa10.61□□□□□ -0.71
HMGCS1-201ENST00000325110 IGHV3-72A0A0B4J1Y9 119 aa10.61□□□□□ -0.71
HMGCS1-201ENST00000325110 A8MWP6 167 aa10.61□□□□□ -0.71
HMGCS1-201ENST00000325110 MMP23AO75900 390 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms