RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 OR13C7P0DN81 318 aa13.42□□□□□ -0.26
TPM1-203ENST00000317516 MZT2AQ6P582 158 aa13.42□□□□□ -0.26
TPM1-203ENST00000317516 PLET1Q6UQ28 207 aa13.42□□□□□ -0.26
TPM1-203ENST00000317516 SNX29P2Q8IUI4 249 aa13.42□□□□□ -0.26
TPM1-203ENST00000317516 VN1R17PQ8TDU5 208 aa13.42□□□□□ -0.26
TPM1-203ENST00000317516 MFSD2BA6NFX1 497 aa13.41□□□□□ -0.26
TPM1-203ENST00000317516 SERPINE2P07093 398 aa13.41□□□□□ -0.26
TPM1-203ENST00000317516 RCVRNP35243 200 aa13.41□□□□□ -0.26
TPM1-203ENST00000317516 CASC10Q5T4H9 136 aa13.41□□□□□ -0.26
TPM1-203ENST00000317516 ZNF57Q68EA5 555 aaPredicted RBP13.41□□□□□ -0.26
TPM1-203ENST00000317516 SLC25A24Q6NUK1 477 aa13.41□□□□□ -0.26
TPM1-203ENST00000317516 GDPD1Q8N9F7 314 aa13.41□□□□□ -0.26
TPM1-203ENST00000317516 OR10W1Q8NGF6 305 aa13.41□□□□□ -0.26
TPM1-203ENST00000317516 AP3S1Q92572 193 aa13.41□□□□□ -0.26
TPM1-203ENST00000317516 LSM10Q969L4 123 aaKnown RBP13.41□□□□□ -0.26
TPM1-203ENST00000317516 MARC2Q969Z3 335 aa13.41□□□□□ -0.26
TPM1-203ENST00000317516 ISOC1Q96CN7 298 aa13.41□□□□□ -0.26
TPM1-203ENST00000317516 TSC22D3Q99576 134 aa13.41□□□□□ -0.26
TPM1-203ENST00000317516 HINT2Q9BX68 163 aa13.41□□□□□ -0.26
TPM1-203ENST00000317516 ZC4H2Q9NQZ6 224 aa13.41□□□□□ -0.26
TPM1-203ENST00000317516 FAM212BQ9NTI7 297 aaPredicted RBP13.41□□□□□ -0.26
TPM1-203ENST00000317516 PRNDQ9UKY0 176 aa13.41□□□□□ -0.26
TPM1-203ENST00000317516 A8MWP6 167 aa13.4□□□□□ -0.26
TPM1-203ENST00000317516 G6PCP35575 357 aa13.4□□□□□ -0.26
TPM1-203ENST00000317516 ANKRD55Q3KP44 614 aa13.4□□□□□ -0.26
TPM1-203ENST00000317516 ZNF585BQ52M93 769 aa13.4□□□□□ -0.26
TPM1-203ENST00000317516 SLC16A13Q7RTY0 426 aa13.4□□□□□ -0.26
TPM1-203ENST00000317516 UXS1Q8NBZ7 420 aa13.4□□□□□ -0.26
TPM1-203ENST00000317516 OR1L6Q8NGR2 347 aa13.4□□□□□ -0.26
TPM1-203ENST00000317516 OR5B3Q8NH48 314 aa13.4□□□□□ -0.26
TPM1-203ENST00000317516 ZNF502Q8TBZ5 544 aa13.4□□□□□ -0.26
TPM1-203ENST00000317516 TMEM56Q96MV1 263 aa13.4□□□□□ -0.26
TPM1-203ENST00000317516 PLEKHA3Q9HB20 300 aa13.4□□□□□ -0.26
TPM1-203ENST00000317516 NDUFA4L2Q9NRX3 87 aa13.4□□□□□ -0.26
TPM1-203ENST00000317516 UFC1Q9Y3C8 167 aa13.4□□□□□ -0.26
TPM1-203ENST00000317516 OR51B2Q9Y5P1 312 aa13.4□□□□□ -0.26
TPM1-203ENST00000317516 CEPT1Q9Y6K0 416 aa13.4□□□□□ -0.26
TPM1-203ENST00000317516 TMEM213A2RRL7 107 aa13.39□□□□□ -0.27
TPM1-203ENST00000317516 OR11H12B2RN74 326 aa13.39□□□□□ -0.27
TPM1-203ENST00000317516 FAM25AB3EWG3 89 aa13.39□□□□□ -0.27
TPM1-203ENST00000317516 FAM25CB3EWG5 89 aa13.39□□□□□ -0.27
TPM1-203ENST00000317516 FAM25GB3EWG6 89 aa13.39□□□□□ -0.27
TPM1-203ENST00000317516 HPGDSO60760 199 aa13.39□□□□□ -0.27
TPM1-203ENST00000317516 CD7P09564 240 aa13.39□□□□□ -0.27
TPM1-203ENST00000317516 ELK1P19419 428 aa13.39□□□□□ -0.27
TPM1-203ENST00000317516 GPR183P32249 361 aa13.39□□□□□ -0.27
TPM1-203ENST00000317516 UCP3P55916 312 aa13.39□□□□□ -0.27
TPM1-203ENST00000317516 PHLDA2Q53GA4 152 aa13.39□□□□□ -0.27
TPM1-203ENST00000317516 SLC38A6Q8IZM9 456 aa13.39□□□□□ -0.27
TPM1-203ENST00000317516 FXYD6Q9H0Q3 95 aa13.39□□□□□ -0.27
TPM1-203ENST00000317516 ELLP55199 621 aaPredicted RBP13.38□□□□□ -0.27
TPM1-203ENST00000317516 WT1-ASQ06250 92 aa13.38□□□□□ -0.27
TPM1-203ENST00000317516 WDR89Q96FK6 387 aaPredicted RBP13.38□□□□□ -0.27
TPM1-203ENST00000317516 ATP6V0BQ99437 205 aa13.38□□□□□ -0.27
TPM1-203ENST00000317516 MRPL27Q9P0M9 148 aaKnown RBP13.38□□□□□ -0.27
TPM1-203ENST00000317516 NSG2Q9Y328 171 aa13.38□□□□□ -0.27
TPM1-203ENST00000317516 F11RQ9Y624 299 aaKnown RBP13.38□□□□□ -0.27
TPM1-203ENST00000317516 TRAV25A0A0B4J276 109 aa13.37□□□□□ -0.27
TPM1-203ENST00000317516 TGOLN2O43493 480 aa13.37□□□□□ -0.27
TPM1-203ENST00000317516 ZNF182P17025 639 aaPredicted RBP13.37□□□□□ -0.27
TPM1-203ENST00000317516 EDN2P20800 178 aa13.37□□□□□ -0.27
TPM1-203ENST00000317516 TM4SF20Q53R12 229 aa13.37□□□□□ -0.27
TPM1-203ENST00000317516 SPSB3Q6PJ21 355 aa13.37□□□□□ -0.27
TPM1-203ENST00000317516 LINC00322Q6ZN03 302 aaPredicted RBP13.37□□□□□ -0.27
TPM1-203ENST00000317516 RBPMS2Q6ZRY4 209 aaKnown RBP13.37□□□□□ -0.27
TPM1-203ENST00000317516 TBC1D26Q86UD7 250 aa13.37□□□□□ -0.27
TPM1-203ENST00000317516 DEFB125Q8N687 156 aa13.37□□□□□ -0.27
TPM1-203ENST00000317516 C15orf40Q8WUR7 153 aa13.37□□□□□ -0.27
TPM1-203ENST00000317516 CACNG8Q8WXS5 425 aa13.37□□□□□ -0.27
TPM1-203ENST00000317516 BSCL2Q96G97 398 aaPredicted RBP13.37□□□□□ -0.27
TPM1-203ENST00000317516 EDA2RQ9HAV5 297 aa13.37□□□□□ -0.27
TPM1-203ENST00000317516 C8orf88P0DMB2 117 aa13.36□□□□□ -0.27
TPM1-203ENST00000317516 UNQ9165/PRO28630Q6UXU0 137 aa13.36□□□□□ -0.27
TPM1-203ENST00000317516 H2BFWTQ7Z2G1 175 aa13.36□□□□□ -0.27
TPM1-203ENST00000317516 TMEM61Q8N0U2 210 aa13.36□□□□□ -0.27
TPM1-203ENST00000317516 OR52B4Q8NGK2 314 aa13.36□□□□□ -0.27
TPM1-203ENST00000317516 OR4A16Q8NH70 328 aa13.36□□□□□ -0.27
TPM1-203ENST00000317516 ZNF436Q9C0F3 470 aaPredicted RBP13.36□□□□□ -0.27
TPM1-203ENST00000317516 SRD5A3Q9H8P0 318 aa13.36□□□□□ -0.27
TPM1-203ENST00000317516 TMEM14BQ9NUH8 114 aa13.36□□□□□ -0.27
TPM1-203ENST00000317516 GAR1Q9NY12 217 aaKnown RBP13.36□□□□□ -0.27
TPM1-203ENST00000317516 C21orf62Q9NYP8 219 aa13.36□□□□□ -0.27
TPM1-203ENST00000317516 MLXQ9UH92 298 aa13.36□□□□□ -0.27
TPM1-203ENST00000317516 KMT2CQ8NEZ4 4911 aaKnown RBP13.36□□□□□ -0.27
TPM1-203ENST00000317516 IGHV3-35A0A0C4DH35 117 aa13.35□□□□□ -0.27
TPM1-203ENST00000317516 OR2T8A6NH00 312 aa13.35□□□□□ -0.27
TPM1-203ENST00000317516 GABARAPO95166 117 aa13.35□□□□□ -0.27
TPM1-203ENST00000317516 RNASE10Q5GAN6 216 aaKnown RBP13.35□□□□□ -0.27
TPM1-203ENST00000317516 BTNL8Q6UX41 500 aa13.35□□□□□ -0.27
TPM1-203ENST00000317516 SCARB1Q8WTV0 552 aa13.35□□□□□ -0.27
TPM1-203ENST00000317516 C15orf61A6NNL5 157 aa13.34□□□□□ -0.27
TPM1-203ENST00000317516 SCAF4O95104 1147 aaKnown RBP13.34□□□□□ -0.27
TPM1-203ENST00000317516 TBPP20226 339 aa13.34□□□□□ -0.27
TPM1-203ENST00000317516 CTF1Q16619 201 aa13.34□□□□□ -0.27
TPM1-203ENST00000317516 OR1P1Q8NH06 330 aa13.34□□□□□ -0.27
TPM1-203ENST00000317516 ZNF486Q96H40 463 aaPredicted RBP13.34□□□□□ -0.27
TPM1-203ENST00000317516 SEC22AQ96IW7 307 aa13.34□□□□□ -0.27
TPM1-203ENST00000317516 HIPK2Q9H2X6 1198 aa13.34□□□□□ -0.27
TPM1-203ENST00000317516 EXTL2Q9UBQ6 330 aa13.34□□□□□ -0.27
TPM1-203ENST00000317516 RBMY1BA6NDE4 496 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms