RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 OR1L4Q8NGR5 311 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 MBD6Q96DN6 1003 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 LOC105371242A0A075B767 164 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 C9orf135Q5VTT2 229 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 NEUROG1Q92886 237 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 CXXC4Q9H2H0 198 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 A0A1B0GW15 77 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 CGAP01215 116 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 OR9G9P0C7N8 305 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 INO80CQ6PI98 192 aaPredicted RBP3.95□□□□□ -1.78
PTPN13-201ENST00000316707 LOXL4Q96JB6 756 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 CST9LQ9H4G1 147 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 C2orf70A6NJV1 201 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 J3QR89 54 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 DEFA4P12838 97 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 CCL2P13500 99 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 HBBP68871 147 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 C2orf83Q53S99 150 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 LDLRAD2Q5SZI1 272 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 DOLPP1Q86YN1 238 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 SLC25A40Q8TBP6 338 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 LINC00473A8K010 186 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 C2CD4DB7Z1M9 353 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 PSPNO60542 156 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 CSN1S1P47710 185 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 RPS16P62249 146 aaKnown RBP3.95□□□□□ -1.78
PTPN13-201ENST00000316707 ARG2P78540 354 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 MPV17L2Q567V2 206 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 OR4A47Q6IF82 309 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 OR4F17Q8NGA8 305 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 HINT2Q9BX68 163 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 COL25A1Q9BXS0 654 aaPredicted RBP3.95□□□□□ -1.78
PTPN13-201ENST00000316707 FOXA2Q9Y261 457 aaPredicted RBP3.95□□□□□ -1.78
PTPN13-201ENST00000316707 CELA2AP08217 269 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 RFPL3SP0C7P2 107 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 CEACAM8P31997 349 aaPredicted RBP3.95□□□□□ -1.78
PTPN13-201ENST00000316707 GUSBP11Q6P575 273 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 GCSAMQ8N6F7 178 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 NUDT10Q8NFP7 164 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 RFESDQ8TAC1 157 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 ENSAO43768 121 aaKnown RBP3.95□□□□□ -1.78
PTPN13-201ENST00000316707 HOXC12P31275 282 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 ETFRF1Q6IPR1 90 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 PPP1R32Q7Z5V6 425 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 SPATA12Q7Z6I5 190 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 ABHD12Q8N2K0 398 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 DAZAP1Q96EP5 407 aaKnown RBP3.95□□□□□ -1.78
PTPN13-201ENST00000316707 COQ2Q96H96 371 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 GPR82Q96P67 336 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 TNFRSF19Q9NS68 423 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 CRIM1Q9NZV1 1036 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 HSPB8Q9UJY1 196 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 GAGE10A6NGK3 116 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 TNXAQ16473 311 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 FAM19A2Q8N3H0 131 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 ZPBPQ9BS86 351 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 GFRA4Q9GZZ7 299 aa3.95□□□□□ -1.78
PTPN13-201ENST00000316707 SPINK4O60575 86 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 SNCGO76070 127 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 PRCDQ00LT1 54 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 ALKBH2Q6NS38 261 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 ACP7Q6ZNF0 438 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 NHLRC2Q8NBF2 726 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 OR13A1Q8NGR1 328 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 PHF7Q9BWX1 381 aaPredicted RBP3.94□□□□□ -1.78
PTPN13-201ENST00000316707 SYS1-DBNDD2H3BUS1 97 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 GDF9O60383 454 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 SP9P0CG40 484 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 SMIM17P0DL12 118 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 CFHR2P36980 270 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 AESQ08117 197 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 MIR17HGQ75NE6 70 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 BPIFA4PQ86YQ2 179 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 TMEM251Q8N6I4 163 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 SAP25Q8TEE9 199 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 H1FXQ92522 213 aaKnown RBP3.94□□□□□ -1.78
PTPN13-201ENST00000316707 RCHY1Q96PM5 261 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 CDX2Q99626 313 aaPredicted RBP3.94□□□□□ -1.78
PTPN13-201ENST00000316707 MAP1LC3CQ9BXW4 147 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 LTBRP36941 435 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 VSTM2AQ8TAG5 236 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 ZNF714Q96N38 554 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 RNASE7Q9H1E1 156 aaKnown RBP3.94□□□□□ -1.78
PTPN13-201ENST00000316707 KLF13Q9Y2Y9 288 aaPredicted RBP3.94□□□□□ -1.78
PTPN13-201ENST00000316707 F2Z2F3 143 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 KLRC4-KLRK1H3BQV0 150 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 MPV17P39210 176 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 CXCL12P48061 93 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 TCF24Q7RTU0 167 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 MDP1Q86V88 176 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 ZNF492Q9P255 531 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 INS-IGF2F8WCM5 200 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 GRPP07492 148 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 CD69Q07108 199 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 LYSMD4Q5XG99 296 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 EBLN2Q6P2I7 272 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 OR9G4Q8NGQ1 327 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 IFI27L2Q9H2X8 130 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 AKIRIN1Q9H9L7 192 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms