RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 HIST1H2BNQ99877 126 aa6.09□□□□□ -1.43
SOX6-201ENST00000316399 HIST1H2BMQ99879 126 aa6.09□□□□□ -1.43
SOX6-201ENST00000316399 SMOC1Q9H4F8 434 aa6.09□□□□□ -1.43
SOX6-201ENST00000316399 FZR1Q9UM11 496 aa6.09□□□□□ -1.43
SOX6-201ENST00000316399 IGKV1-9A0A0C4DH69 117 aa6.09□□□□□ -1.43
SOX6-201ENST00000316399 C2orf83Q53S99 150 aa6.09□□□□□ -1.43
SOX6-201ENST00000316399 PAQR4Q8N4S7 273 aaPredicted RBP6.09□□□□□ -1.43
SOX6-201ENST00000316399 NEU4Q8WWR8 484 aaPredicted RBP6.09□□□□□ -1.43
SOX6-201ENST00000316399 PPIAL4CA0A0B4J2A2 164 aa6.09□□□□□ -1.43
SOX6-201ENST00000316399 FOXH1O75593 365 aa6.09□□□□□ -1.43
SOX6-201ENST00000316399 PPIAL4GP0DN37 164 aa6.09□□□□□ -1.43
SOX6-201ENST00000316399 LAMTOR2Q9Y2Q5 125 aa6.09□□□□□ -1.43
SOX6-201ENST00000316399 TRPM7Q96QT4 1865 aa6.09□□□□□ -1.43
SOX6-201ENST00000316399 IL18BPO95998 194 aa6.09□□□□□ -1.44
SOX6-201ENST00000316399 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.09□□□□□ -1.44
SOX6-201ENST00000316399 PRNTQ86SH4 94 aa6.09□□□□□ -1.44
SOX6-201ENST00000316399 BEND2Q8NDZ0 799 aa6.09□□□□□ -1.44
SOX6-201ENST00000316399 RAX2Q96IS3 184 aa6.09□□□□□ -1.44
SOX6-201ENST00000316399 PIMREGQ9BSJ6 248 aa6.09□□□□□ -1.44
SOX6-201ENST00000316399 AGFG2O95081 481 aa6.09□□□□□ -1.44
SOX6-201ENST00000316399 STAG3L3P0CL85 134 aa6.09□□□□□ -1.44
SOX6-201ENST00000316399 TMEM11P17152 192 aa6.09□□□□□ -1.44
SOX6-201ENST00000316399 TMEM14EPQ6UXP3 125 aa6.09□□□□□ -1.44
SOX6-201ENST00000316399 PLPPR2Q96GM1 343 aa6.09□□□□□ -1.44
SOX6-201ENST00000316399 OPN3Q9H1Y3 402 aaPredicted RBP6.09□□□□□ -1.44
SOX6-201ENST00000316399 NOTCH3Q9UM47 2321 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 QRFPP83859 136 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 NMSQ5H8A3 153 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 HEPN1Q6WQI6 88 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 TMEM136Q6ZRR5 245 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 OR9G4Q8NGQ1 327 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 ASCL2Q99929 193 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 TMEM106BQ9NUM4 274 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 FOXA2Q9Y261 457 aaPredicted RBP6.08□□□□□ -1.44
SOX6-201ENST00000316399 GHRHP01286 108 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 MST1P26927 711 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 SNRPD3P62318 126 aaKnown RBP6.08□□□□□ -1.44
SOX6-201ENST00000316399 CIRBPQ14011 172 aaKnown RBP6.08□□□□□ -1.44
SOX6-201ENST00000316399 ECSCRQ19T08 205 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 TEX45Q8NA69 505 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 OR5A1Q8NGJ0 315 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 MYO7BQ6PIF6 2116 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 IGHV1-69-2A0A0G2JMI3 117 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 A1L4Q6 167 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 MOSP00540 346 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 LHX2P50458 406 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 ATP5G2Q06055 141 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 DPF1Q92782 380 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 REG4Q9BYZ8 158 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 CACNA1DQ01668 2161 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 PGPA6NDG6 321 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 ABHD12Q8N2K0 398 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 OR1N2Q8NGR9 330 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 VWCEQ96DN2 955 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 SRSF8Q9BRL6 282 aaKnown RBP6.08□□□□□ -1.44
SOX6-201ENST00000316399 NXT2Q9NPJ8 142 aaKnown RBP6.08□□□□□ -1.44
SOX6-201ENST00000316399 WNK2Q9Y3S1 2297 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 UPK2O00526 184 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 GDF9O60383 454 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 CRYBB3P26998 211 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 PSMB2P49721 201 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 CACNG7P62955 275 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 CCL8P80075 99 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 NABP1Q96AH0 204 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 GFRA4Q9GZZ7 299 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 MTCL1Q9Y4B5 1905 aaKnown RBP6.08□□□□□ -1.44
SOX6-201ENST00000316399 CECR9P0C854 216 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 SEC11AP67812 179 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 CSRP2Q16527 193 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 ORMDL3Q8N138 153 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 DPM3Q9P2X0 92 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 TRAV9-2A0A087WT02 112 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 COLCA2A8K830 154 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 APOBEC3AP31941 199 aaPredicted RBP6.08□□□□□ -1.44
SOX6-201ENST00000316399 TEX38Q6PEX7 206 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 SPANXA1Q9NS26 97 aa6.08□□□□□ -1.44
SOX6-201ENST00000316399 FAM231BA6NCW3 169 aa6.07□□□□□ -1.44
SOX6-201ENST00000316399 SRRM5B3KS81 715 aa6.07□□□□□ -1.44
SOX6-201ENST00000316399 STPG1Q5TH74 334 aa6.07□□□□□ -1.44
SOX6-201ENST00000316399 OR13A1Q8NGR1 328 aa6.07□□□□□ -1.44
SOX6-201ENST00000316399 FAM57AQ8TBR7 257 aa6.07□□□□□ -1.44
SOX6-201ENST00000316399 TSKUQ8WUA8 353 aa6.07□□□□□ -1.44
SOX6-201ENST00000316399 CYTL1Q9NRR1 136 aa6.07□□□□□ -1.44
SOX6-201ENST00000316399 MRPL27Q9P0M9 148 aaKnown RBP6.07□□□□□ -1.44
SOX6-201ENST00000316399 POLEQ07864 2286 aa6.07□□□□□ -1.44
SOX6-201ENST00000316399 M0R3E3 92 aa6.07□□□□□ -1.44
SOX6-201ENST00000316399 ZFP36L1Q07352 338 aaKnown RBP6.07□□□□□ -1.44
SOX6-201ENST00000316399 ALKBH7Q9BT30 221 aaPredicted RBP6.07□□□□□ -1.44
SOX6-201ENST00000316399 PHLDA3Q9Y5J5 127 aa6.07□□□□□ -1.44
SOX6-201ENST00000316399 CHD5Q8TDI0 1954 aa6.07□□□□□ -1.44
SOX6-201ENST00000316399 PRR32B1ATL7 298 aa6.07□□□□□ -1.44
SOX6-201ENST00000316399 TM4SF20Q53R12 229 aa6.07□□□□□ -1.44
SOX6-201ENST00000316399 CT83Q5H943 113 aa6.07□□□□□ -1.44
SOX6-201ENST00000316399 CLDN16Q9Y5I7 305 aa6.07□□□□□ -1.44
SOX6-201ENST00000316399 NTN3O00634 580 aaPredicted RBP6.07□□□□□ -1.44
SOX6-201ENST00000316399 C1QL2Q7Z5L3 287 aa6.07□□□□□ -1.44
SOX6-201ENST00000316399 THSD7BQ9C0I4 1608 aa6.07□□□□□ -1.44
SOX6-201ENST00000316399 CUL9Q8IWT3 2517 aa6.07□□□□□ -1.44
SOX6-201ENST00000316399 TCRBV4S1A1TA0A5B7 111 aa6.07□□□□□ -1.44
SOX6-201ENST00000316399 SSTR5P35346 364 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms