RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 STPG3Q8N7X2 389 aa12.33□□□□□ -0.44
TFE3-201ENST00000315869 MRPL18Q9H0U6 180 aaKnown RBP12.33□□□□□ -0.44
TFE3-201ENST00000315869 ELOVL5Q9NYP7 299 aa12.33□□□□□ -0.44
TFE3-201ENST00000315869 NAT8BQ9UHF3 227 aa12.33□□□□□ -0.44
TFE3-201ENST00000315869 NOTCH2Q04721 2471 aa12.33□□□□□ -0.44
TFE3-201ENST00000315869 MT-CO2P00403 227 aa12.32□□□□□ -0.44
TFE3-201ENST00000315869 IL6RP08887 468 aaPredicted RBP12.32□□□□□ -0.44
TFE3-201ENST00000315869 WNT2P09544 360 aa12.32□□□□□ -0.44
TFE3-201ENST00000315869 ZNF25P17030 456 aaPredicted RBP12.32□□□□□ -0.44
TFE3-201ENST00000315869 TIMP3P35625 211 aa12.32□□□□□ -0.44
TFE3-201ENST00000315869 RHOBP62745 196 aa12.32□□□□□ -0.44
TFE3-201ENST00000315869 DOLPP1Q86YN1 238 aa12.32□□□□□ -0.44
TFE3-201ENST00000315869 NPVFQ9HCQ7 196 aa12.32□□□□□ -0.44
TFE3-201ENST00000315869 PLXNB1O43157 2135 aa12.32□□□□□ -0.44
TFE3-201ENST00000315869 FRMD6-AS1P0C7T7 363 aa12.32□□□□□ -0.44
TFE3-201ENST00000315869 P0C879 139 aa12.32□□□□□ -0.44
TFE3-201ENST00000315869 COA6Q5JTJ3 125 aaKnown RBP12.32□□□□□ -0.44
TFE3-201ENST00000315869 TEPPQ6URK8 271 aa12.32□□□□□ -0.44
TFE3-201ENST00000315869 C2orf88Q9BSF0 95 aa12.32□□□□□ -0.44
TFE3-201ENST00000315869 OPN3Q9H1Y3 402 aaPredicted RBP12.32□□□□□ -0.44
TFE3-201ENST00000315869 EPG5Q9HCE0 2579 aa12.31□□□□□ -0.44
TFE3-201ENST00000315869 PROP1O75360 226 aa12.31□□□□□ -0.44
TFE3-201ENST00000315869 SERF1AO75920 110 aa12.31□□□□□ -0.44
TFE3-201ENST00000315869 IGFBP2P18065 325 aa12.31□□□□□ -0.44
TFE3-201ENST00000315869 PMCHP20382 165 aa12.31□□□□□ -0.44
TFE3-201ENST00000315869 TPPP2P59282 170 aa12.31□□□□□ -0.44
TFE3-201ENST00000315869 MORN2Q502X0 79 aa12.31□□□□□ -0.44
TFE3-201ENST00000315869 DNLZQ5SXM8 178 aa12.31□□□□□ -0.44
TFE3-201ENST00000315869 Q6ZT83 130 aa12.31□□□□□ -0.44
TFE3-201ENST00000315869 BTF3L4Q96K17 158 aa12.31□□□□□ -0.44
TFE3-201ENST00000315869 SNHG12Q9BXW3 62 aa12.31□□□□□ -0.44
TFE3-201ENST00000315869 M0R1B8 84 aa12.31□□□□□ -0.44
TFE3-201ENST00000315869 CRYBB3P26998 211 aa12.31□□□□□ -0.44
TFE3-201ENST00000315869 OR10J1P30954 320 aa12.31□□□□□ -0.44
TFE3-201ENST00000315869 MRPL54Q6P161 138 aaKnown RBP12.31□□□□□ -0.44
TFE3-201ENST00000315869 MOB3BQ86TA1 216 aa12.31□□□□□ -0.44
TFE3-201ENST00000315869 POLR3KQ9Y2Y1 108 aaPredicted RBP12.31□□□□□ -0.44
TFE3-201ENST00000315869 UTF1Q5T230 341 aa12.31□□□□□ -0.44
TFE3-201ENST00000315869 ASPHD1Q5U4P2 390 aa12.31□□□□□ -0.44
TFE3-201ENST00000315869 SLC24A4Q8NFF2 622 aa12.31□□□□□ -0.44
TFE3-201ENST00000315869 GFRA3O60609 400 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 STAG3L2P0CL84 134 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 STAG3L3P0CL85 134 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 FOSL1P15407 271 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 NTF3P20783 257 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 OPRK1P41145 380 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 ZNF134P52741 427 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 MIR17HGQ75NE6 70 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 RPRMLQ8N4K4 120 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 NHLRC2Q8NBF2 726 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 CA2P00918 260 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 GNG4P50150 75 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 EFNB3Q15768 340 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 PQLC2Q6ZP29 291 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 TCTEX1D1Q8N7M0 179 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 C9orf106Q8NAJ2 232 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 RND1Q92730 232 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 OR2V2Q96R30 315 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 COL25A1Q9BXS0 654 aaPredicted RBP12.3□□□□□ -0.44
TFE3-201ENST00000315869 MPDU1O75352 247 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 IGHV3-48P01763 117 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 TYMSP04818 313 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 RPL15P61313 204 aaKnown RBP12.3□□□□□ -0.44
TFE3-201ENST00000315869 ZNF124Q15973 351 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 TDRG1Q3Y452 100 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 OR4S2Q8NH73 311 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 Q8TCH9 128 aa12.3□□□□□ -0.44
TFE3-201ENST00000315869 F2Z2F3 143 aa12.29□□□□□ -0.44
TFE3-201ENST00000315869 SUMO1P63165 101 aaKnown RBP12.29□□□□□ -0.44
TFE3-201ENST00000315869 MMD2Q8IY49 270 aa12.29□□□□□ -0.44
TFE3-201ENST00000315869 SIGLECL1Q8N7X8 197 aa12.29□□□□□ -0.44
TFE3-201ENST00000315869 HELTA6NFD8 242 aa12.29□□□□□ -0.44
TFE3-201ENST00000315869 J3QW42 95 aa12.29□□□□□ -0.44
TFE3-201ENST00000315869 MRPS11P82912 194 aaKnown RBP12.29□□□□□ -0.44
TFE3-201ENST00000315869 OR5AU1Q8NGC0 362 aa12.29□□□□□ -0.44
TFE3-201ENST00000315869 VAMP8Q9BV40 100 aa12.29□□□□□ -0.44
TFE3-201ENST00000315869 RNASE7Q9H1E1 156 aaKnown RBP12.29□□□□□ -0.44
TFE3-201ENST00000315869 HES4Q9HCC6 221 aa12.29□□□□□ -0.44
TFE3-201ENST00000315869 CALYQ9NYX4 217 aa12.29□□□□□ -0.44
TFE3-201ENST00000315869 A6NNC1 897 aa12.28□□□□□ -0.44
TFE3-201ENST00000315869 RPEL1Q2QD12 228 aa12.28□□□□□ -0.44
TFE3-201ENST00000315869 TIGITQ495A1 244 aa12.28□□□□□ -0.44
TFE3-201ENST00000315869 KRTCAP3Q53RY4 240 aa12.28□□□□□ -0.44
TFE3-201ENST00000315869 ZCCHC14Q8WYQ9 949 aaKnown RBP12.28□□□□□ -0.44
TFE3-201ENST00000315869 IGKV1D-17A0A075B6S4 117 aa12.28□□□□□ -0.44
TFE3-201ENST00000315869 MGST3O14880 152 aa12.28□□□□□ -0.44
TFE3-201ENST00000315869 AMTP48728 403 aa12.28□□□□□ -0.44
TFE3-201ENST00000315869 NUTF2P61970 127 aaKnown RBP12.28□□□□□ -0.44
TFE3-201ENST00000315869 RELBQ01201 579 aa12.28□□□□□ -0.44
TFE3-201ENST00000315869 FOXL1Q12952 345 aa12.28□□□□□ -0.44
TFE3-201ENST00000315869 LBHQ53QV2 105 aaPredicted RBP12.28□□□□□ -0.44
TFE3-201ENST00000315869 ARSJQ5FYB0 599 aaPredicted RBP12.28□□□□□ -0.44
TFE3-201ENST00000315869 C15orf65H3BRN8 121 aa12.28□□□□□ -0.44
TFE3-201ENST00000315869 MLANAQ16655 118 aa12.28□□□□□ -0.44
TFE3-201ENST00000315869 PRR31Q5SQ13 230 aa12.28□□□□□ -0.44
TFE3-201ENST00000315869 ZNRD1Q9P1U0 126 aa12.28□□□□□ -0.44
TFE3-201ENST00000315869 IGHV2OR16-5A0A0B4J2B6 119 aa12.27□□□□□ -0.44
TFE3-201ENST00000315869 TMPRSS2O15393 492 aa12.27□□□□□ -0.44
TFE3-201ENST00000315869 KALRNO60229 2985 aa12.27□□□□□ -0.44
TFE3-201ENST00000315869 CDKN1AP38936 164 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms