RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 OR5R1Q8NH85 324 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 ZCCHC14Q8WYQ9 949 aaKnown RBP10.18□□□□□ -0.78
RNF4-201ENST00000314289 RCC1LQ96I51 464 aaKnown RBP10.18□□□□□ -0.78
RNF4-201ENST00000314289 NAV3Q8IVL0 2385 aa10.17□□□□□ -0.78
RNF4-201ENST00000314289 hADV38S2A0JD32 116 aa10.17□□□□□ -0.78
RNF4-201ENST00000314289 DVL1O14640 695 aa10.17□□□□□ -0.78
RNF4-201ENST00000314289 OR1P1Q8NH06 330 aa10.17□□□□□ -0.78
RNF4-201ENST00000314289 ATG101Q9BSB4 218 aa10.17□□□□□ -0.78
RNF4-201ENST00000314289 VPS13CQ709C8 3753 aa10.17□□□□□ -0.78
RNF4-201ENST00000314289 TRBV24-1A0A075B6N3 115 aa10.17□□□□□ -0.78
RNF4-201ENST00000314289 PMS2P5A8MQ11 134 aa10.17□□□□□ -0.78
RNF4-201ENST00000314289 CD81P60033 236 aa10.17□□□□□ -0.78
RNF4-201ENST00000314289 ADORA2A-AS1P86434 159 aa10.17□□□□□ -0.78
RNF4-201ENST00000314289 ACSM6Q6P461 480 aa10.17□□□□□ -0.78
RNF4-201ENST00000314289 DPPA3Q6W0C5 159 aa10.17□□□□□ -0.78
RNF4-201ENST00000314289 ZNF439Q8NDP4 499 aa10.17□□□□□ -0.78
RNF4-201ENST00000314289 OR5T1Q8NG75 326 aa10.17□□□□□ -0.78
RNF4-201ENST00000314289 DDB2Q92466 427 aa10.17□□□□□ -0.78
RNF4-201ENST00000314289 SLC25A22Q9H936 323 aa10.17□□□□□ -0.78
RNF4-201ENST00000314289 RPUSD1Q9UJJ7 312 aaKnown RBP10.17□□□□□ -0.78
RNF4-201ENST00000314289 A0A1W2PPQ1 181 aa10.16□□□□□ -0.78
RNF4-201ENST00000314289 C15orf62A8K5M9 175 aa10.16□□□□□ -0.78
RNF4-201ENST00000314289 A8MWP6 167 aa10.16□□□□□ -0.78
RNF4-201ENST00000314289 VSTM5A8MXK1 200 aa10.16□□□□□ -0.78
RNF4-201ENST00000314289 TCAPO15273 167 aa10.16□□□□□ -0.78
RNF4-201ENST00000314289 RAB7AP51149 207 aa10.16□□□□□ -0.78
RNF4-201ENST00000314289 RELBQ01201 579 aa10.16□□□□□ -0.78
RNF4-201ENST00000314289 OR4A47Q6IF82 309 aa10.16□□□□□ -0.78
RNF4-201ENST00000314289 ELOVL1Q9BW60 279 aa10.16□□□□□ -0.78
RNF4-201ENST00000314289 ZFYVE26Q68DK2 2539 aa10.16□□□□□ -0.78
RNF4-201ENST00000314289 MAP1LC3B2A6NCE7 125 aa10.16□□□□□ -0.78
RNF4-201ENST00000314289 SRRM4A7MD48 611 aaKnown RBP10.16□□□□□ -0.78
RNF4-201ENST00000314289 EREGO14944 169 aa10.16□□□□□ -0.78
RNF4-201ENST00000314289 CT45A6P0DMU7 189 aa10.16□□□□□ -0.78
RNF4-201ENST00000314289 CT45A5P0DMU8 189 aa10.16□□□□□ -0.78
RNF4-201ENST00000314289 CT45A7P0DMV0 189 aa10.16□□□□□ -0.78
RNF4-201ENST00000314289 APOBEC3AP31941 199 aaPredicted RBP10.16□□□□□ -0.78
RNF4-201ENST00000314289 UCNP55089 124 aa10.16□□□□□ -0.78
RNF4-201ENST00000314289 GCSAMLQ5JQS6 135 aa10.16□□□□□ -0.78
RNF4-201ENST00000314289 OR10G4Q8NGN3 311 aa10.16□□□□□ -0.78
RNF4-201ENST00000314289 TMEM37Q8WXS4 190 aa10.16□□□□□ -0.78
RNF4-201ENST00000314289 MAP1LC3BQ9GZQ8 125 aa10.16□□□□□ -0.78
RNF4-201ENST00000314289 IGHV1-69-2A0A0G2JMI3 117 aa10.15□□□□□ -0.78
RNF4-201ENST00000314289 TGOLN2O43493 480 aa10.15□□□□□ -0.78
RNF4-201ENST00000314289 NDUFB3O43676 98 aa10.15□□□□□ -0.78
RNF4-201ENST00000314289 G0S2P27469 103 aa10.15□□□□□ -0.78
RNF4-201ENST00000314289 DNLZQ5SXM8 178 aa10.15□□□□□ -0.78
RNF4-201ENST00000314289 MUC15Q8N387 334 aa10.15□□□□□ -0.78
RNF4-201ENST00000314289 RPP25LQ8N5L8 163 aaKnown RBP10.15□□□□□ -0.78
RNF4-201ENST00000314289 OR4S2Q8NH73 311 aa10.15□□□□□ -0.78
RNF4-201ENST00000314289 ZNF714Q96N38 554 aa10.15□□□□□ -0.78
RNF4-201ENST00000314289 DIRC2Q96SL1 478 aa10.15□□□□□ -0.78
RNF4-201ENST00000314289 C2orf88Q9BSF0 95 aa10.15□□□□□ -0.78
RNF4-201ENST00000314289 TMEM242Q9NWH2 141 aa10.15□□□□□ -0.78
RNF4-201ENST00000314289 VAX2Q9UIW0 290 aa10.15□□□□□ -0.78
RNF4-201ENST00000314289 TRAV1-1A0A0B4J248 108 aa10.15□□□□□ -0.78
RNF4-201ENST00000314289 PMS2P11Q13670 270 aa10.15□□□□□ -0.78
RNF4-201ENST00000314289 CYB5R2Q6BCY4 276 aa10.15□□□□□ -0.78
RNF4-201ENST00000314289 TCTEX1D1Q8N7M0 179 aa10.15□□□□□ -0.78
RNF4-201ENST00000314289 PCGF1Q9BSM1 259 aa10.15□□□□□ -0.78
RNF4-201ENST00000314289 MS4A5Q9H3V2 200 aa10.15□□□□□ -0.78
RNF4-201ENST00000314289 LINC00312Q9Y6C7 94 aa10.15□□□□□ -0.78
RNF4-201ENST00000314289 PPP5D1E7EU14 171 aa10.15□□□□□ -0.79
RNF4-201ENST00000314289 CHRNB4P30926 498 aa10.15□□□□□ -0.79
RNF4-201ENST00000314289 GALR1P47211 349 aa10.15□□□□□ -0.79
RNF4-201ENST00000314289 LHX4Q969G2 390 aa10.15□□□□□ -0.79
RNF4-201ENST00000314289 MRPL20Q9BYC9 149 aaKnown RBP10.15□□□□□ -0.79
RNF4-201ENST00000314289 SRD5A3Q9H8P0 318 aa10.15□□□□□ -0.79
RNF4-201ENST00000314289 FUT9Q9Y231 359 aa10.15□□□□□ -0.79
RNF4-201ENST00000314289 H7BYZ3 331 aa10.14□□□□□ -0.79
RNF4-201ENST00000314289 SPCS3P61009 180 aa10.14□□□□□ -0.79
RNF4-201ENST00000314289 PRSS8Q16651 343 aa10.14□□□□□ -0.79
RNF4-201ENST00000314289 SLC25A48Q6ZT89 311 aaKnown RBP10.14□□□□□ -0.79
RNF4-201ENST00000314289 MRPL41Q8IXM3 137 aaKnown RBP10.14□□□□□ -0.79
RNF4-201ENST00000314289 FAM122AQ96E09 287 aa10.14□□□□□ -0.79
RNF4-201ENST00000314289 OR5B12Q96R08 314 aa10.14□□□□□ -0.79
RNF4-201ENST00000314289 NDUFAF3Q9BU61 184 aa10.14□□□□□ -0.79
RNF4-201ENST00000314289 TCF19Q9Y242 345 aa10.14□□□□□ -0.79
RNF4-201ENST00000314289 LRRC10Q5BKY1 277 aa10.14□□□□□ -0.79
RNF4-201ENST00000314289 GATAD1Q8WUU5 269 aa10.14□□□□□ -0.79
RNF4-201ENST00000314289 TMEM170AQ8WVE7 144 aa10.14□□□□□ -0.79
RNF4-201ENST00000314289 TMEM147Q9BVK8 224 aa10.14□□□□□ -0.79
RNF4-201ENST00000314289 SLC35D1Q9NTN3 355 aa10.14□□□□□ -0.79
RNF4-201ENST00000314289 NAT8Q9UHE5 227 aa10.14□□□□□ -0.79
RNF4-201ENST00000314289 SPG11Q96JI7 2443 aa10.14□□□□□ -0.79
RNF4-201ENST00000314289 FLNCQ14315 2725 aa10.14□□□□□ -0.79
RNF4-201ENST00000314289 IGHV3-72A0A0B4J1Y9 119 aa10.13□□□□□ -0.79
RNF4-201ENST00000314289 IFNA1P01562 189 aa10.13□□□□□ -0.79
RNF4-201ENST00000314289 TMEM241Q24JQ0 296 aa10.13□□□□□ -0.79
RNF4-201ENST00000314289 BSXQ3C1V8 233 aa10.13□□□□□ -0.79
RNF4-201ENST00000314289 FFAR4Q5NUL3 377 aa10.13□□□□□ -0.79
RNF4-201ENST00000314289 CIB3Q96Q77 187 aaPredicted RBP10.13□□□□□ -0.79
RNF4-201ENST00000314289 NPCDR1Q9BY65 106 aa10.13□□□□□ -0.79
RNF4-201ENST00000314289 CTDSP1Q9GZU7 261 aa10.13□□□□□ -0.79
RNF4-201ENST00000314289 GAL3ST2Q9H3Q3 398 aa10.13□□□□□ -0.79
RNF4-201ENST00000314289 SLC39A9Q9NUM3 307 aa10.13□□□□□ -0.79
RNF4-201ENST00000314289 LOXP28300 417 aaPredicted RBP10.13□□□□□ -0.79
RNF4-201ENST00000314289 ST6GALNAC3Q8NDV1 305 aa10.13□□□□□ -0.79
RNF4-201ENST00000314289 OR10X1Q8NGY0 326 aa10.13□□□□□ -0.79
RNF4-201ENST00000314289 HIPK2Q9H2X6 1198 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms