RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 PQLC2Q6ZP29 291 aa11.33□□□□□ -0.6
DDX54-202ENST00000314045 Q6ZS49 121 aa11.33□□□□□ -0.6
DDX54-202ENST00000314045 WDR86Q86TI4 376 aa11.33□□□□□ -0.6
DDX54-202ENST00000314045 TEX29Q8N6K0 151 aa11.33□□□□□ -0.6
DDX54-202ENST00000314045 CYB561D1Q8N8Q1 229 aa11.33□□□□□ -0.6
DDX54-202ENST00000314045 OR5AU1Q8NGC0 362 aa11.33□□□□□ -0.6
DDX54-202ENST00000314045 RNF166Q96A37 237 aaPredicted RBP11.33□□□□□ -0.6
DDX54-202ENST00000314045 DNAJC4Q9NNZ3 241 aa11.33□□□□□ -0.6
DDX54-202ENST00000314045 LOC105371267A0A1B0GV96 52 aa11.33□□□□□ -0.6
DDX54-202ENST00000314045 HELTA6NFD8 242 aa11.33□□□□□ -0.6
DDX54-202ENST00000314045 SPINK4O60575 86 aa11.33□□□□□ -0.6
DDX54-202ENST00000314045 CD24P25063 80 aa11.33□□□□□ -0.6
DDX54-202ENST00000314045 S100A4P26447 101 aaKnown RBP11.33□□□□□ -0.6
DDX54-202ENST00000314045 LOXL3P58215 753 aa11.33□□□□□ -0.6
DDX54-202ENST00000314045 UPK2O00526 184 aa11.32□□□□□ -0.6
DDX54-202ENST00000314045 CTRB1P17538 263 aa11.32□□□□□ -0.6
DDX54-202ENST00000314045 RPL30P62888 115 aaKnown RBP11.32□□□□□ -0.6
DDX54-202ENST00000314045 CTRB2Q6GPI1 263 aa11.32□□□□□ -0.6
DDX54-202ENST00000314045 LHFPL5Q8TAF8 219 aa11.32□□□□□ -0.6
DDX54-202ENST00000314045 GALR1P47211 349 aa11.32□□□□□ -0.6
DDX54-202ENST00000314045 MEF2BQ02080 365 aaPredicted RBP11.32□□□□□ -0.6
DDX54-202ENST00000314045 PSMG3Q9BT73 122 aaPredicted RBP11.32□□□□□ -0.6
DDX54-202ENST00000314045 AURKAIP1Q9NWT8 199 aaPredicted RBP11.32□□□□□ -0.6
DDX54-202ENST00000314045 SERTM2A0A1B0GWG4 89 aa11.32□□□□□ -0.6
DDX54-202ENST00000314045 SMAD7O15105 426 aaKnown RBP11.32□□□□□ -0.6
DDX54-202ENST00000314045 LYPD2Q6UXB3 125 aa11.32□□□□□ -0.6
DDX54-202ENST00000314045 LDLRAD3Q86YD5 345 aa11.32□□□□□ -0.6
DDX54-202ENST00000314045 DCAF16Q9NXF7 216 aa11.32□□□□□ -0.6
DDX54-202ENST00000314045 MOSP00540 346 aa11.32□□□□□ -0.6
DDX54-202ENST00000314045 HERPUD1Q15011 391 aa11.32□□□□□ -0.6
DDX54-202ENST00000314045 PDZD11Q5EBL8 140 aa11.32□□□□□ -0.6
DDX54-202ENST00000314045 SSX7Q7RTT5 188 aa11.32□□□□□ -0.6
DDX54-202ENST00000314045 OR10G8Q8NGN5 311 aa11.32□□□□□ -0.6
DDX54-202ENST00000314045 ISOC2Q96AB3 205 aa11.32□□□□□ -0.6
DDX54-202ENST00000314045 NABP2Q9BQ15 211 aa11.31□□□□□ -0.6
DDX54-202ENST00000314045 IFI27L2Q9H2X8 130 aa11.31□□□□□ -0.6
DDX54-202ENST00000314045 IGHV3-35A0A0C4DH35 117 aa11.31□□□□□ -0.6
DDX54-202ENST00000314045 IGHV1-8P0DP01 117 aa11.31□□□□□ -0.6
DDX54-202ENST00000314045 HOXA4Q00056 320 aaPredicted RBP11.31□□□□□ -0.6
DDX54-202ENST00000314045 CBLN2Q8IUK8 224 aa11.31□□□□□ -0.6
DDX54-202ENST00000314045 TMEM37Q8WXS4 190 aa11.31□□□□□ -0.6
DDX54-202ENST00000314045 MBNL3Q9NUK0 354 aaKnown RBP11.31□□□□□ -0.6
DDX54-202ENST00000314045 IGLV3-9A0A075B6K5 115 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 SLC35B1P78383 322 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 FAM74A3Q4VXF1 159 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 TNFRSF14Q92956 283 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 CGAP01215 116 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 C8orf88P0DMB2 117 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 RAB4AP20338 218 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 LMO1P25800 156 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 FAM210BQ96KR6 192 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 TIMM23O14925 209 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 GATA4P43694 442 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 ERVK11-1P61568 191 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 LRRC75BQ2VPJ9 315 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 STPG3Q8N7X2 389 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 OR4D5Q8NGN0 318 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 CHD8Q9HCK8 2581 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 IGKV1-6A0A0C4DH72 117 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 S100A8P05109 93 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 PPP1R27Q86WC6 154 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 CCDC168Q8NDH2 2452 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 ZNF439Q8NDP4 499 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 GATAD1Q8WUU5 269 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 RCC1LQ96I51 464 aaKnown RBP11.3□□□□□ -0.6
DDX54-202ENST00000314045 GGACTQ9BVM4 153 aa11.3□□□□□ -0.6
DDX54-202ENST00000314045 IGHV2-26A0A0B4J1V2 119 aa11.29□□□□□ -0.6
DDX54-202ENST00000314045 C15orf61A6NNL5 157 aa11.29□□□□□ -0.6
DDX54-202ENST00000314045 HSBP1L1C9JCN9 74 aa11.29□□□□□ -0.6
DDX54-202ENST00000314045 OR9G9P0C7N8 305 aa11.29□□□□□ -0.6
DDX54-202ENST00000314045 FCGR2BP31994 310 aaPredicted RBP11.29□□□□□ -0.6
DDX54-202ENST00000314045 BPIFA4PQ86YQ2 179 aa11.29□□□□□ -0.6
DDX54-202ENST00000314045 ZNF525Q8N782 197 aa11.29□□□□□ -0.6
DDX54-202ENST00000314045 OR51G1Q8NGK1 321 aa11.29□□□□□ -0.6
DDX54-202ENST00000314045 IFT22Q9H7X7 185 aa11.29□□□□□ -0.6
DDX54-202ENST00000314045 RABAC1Q9UI14 185 aa11.29□□□□□ -0.6
DDX54-202ENST00000314045 DOCK11Q5JSL3 2073 aa11.29□□□□□ -0.6
DDX54-202ENST00000314045 TRAV30A0A087WSZ9 112 aa11.29□□□□□ -0.6
DDX54-202ENST00000314045 NDUFB4O95168 129 aa11.29□□□□□ -0.6
DDX54-202ENST00000314045 SCGB1D1O95968 90 aa11.29□□□□□ -0.6
DDX54-202ENST00000314045 NPCDR1Q9BY65 106 aa11.29□□□□□ -0.6
DDX54-202ENST00000314045 NBR2O15453 112 aa11.29□□□□□ -0.6
DDX54-202ENST00000314045 EAF1Q96JC9 268 aaPredicted RBP11.29□□□□□ -0.6
DDX54-202ENST00000314045 SLC31A2O15432 143 aa11.28□□□□□ -0.6
DDX54-202ENST00000314045 OR2J3O76001 311 aa11.28□□□□□ -0.6
DDX54-202ENST00000314045 HSPB1P04792 205 aaKnown RBP11.28□□□□□ -0.6
DDX54-202ENST00000314045 GUCA2BQ16661 112 aa11.28□□□□□ -0.6
DDX54-202ENST00000314045 TXNDC17Q9BRA2 123 aa11.28□□□□□ -0.6
DDX54-202ENST00000314045 CLEC5AQ9NY25 188 aa11.28□□□□□ -0.6
DDX54-202ENST00000314045 KIAA1324LA8MWY0 1029 aaPredicted RBP11.28□□□□□ -0.6
DDX54-202ENST00000314045 B4DEV8 164 aa11.28□□□□□ -0.6
DDX54-202ENST00000314045 CD55P08174 381 aa11.28□□□□□ -0.6
DDX54-202ENST00000314045 LINC00205P59089 165 aa11.28□□□□□ -0.6
DDX54-202ENST00000314045 SRSF12Q8WXF0 261 aaKnown RBP11.28□□□□□ -0.6
DDX54-202ENST00000314045 FAM103A1Q9BTL3 118 aaKnown RBP11.28□□□□□ -0.6
DDX54-202ENST00000314045 NAT8BQ9UHF3 227 aa11.28□□□□□ -0.6
DDX54-202ENST00000314045 IGKV1-5P01602 117 aa11.28□□□□□ -0.6
DDX54-202ENST00000314045 NTF3P20783 257 aa11.28□□□□□ -0.6
DDX54-202ENST00000314045 TCL1AP56279 114 aa11.28□□□□□ -0.6
DDX54-202ENST00000314045 S4R3C0 116 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms