RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 EWSR1Q01844 656 aaKnown RBP eCLIP2.71□□□□□ -1.98
CLOCK-201ENST00000309964 HIST3H3Q16695 136 aa2.71□□□□□ -1.98
CLOCK-201ENST00000309964 LDLRAD2Q5SZI1 272 aa2.71□□□□□ -1.98
CLOCK-201ENST00000309964 FAM223AQ8IWN6 122 aa2.71□□□□□ -1.98
CLOCK-201ENST00000309964 CRIPAKQ8N1N5 446 aa2.71□□□□□ -1.98
CLOCK-201ENST00000309964 C3orf56Q8N813 242 aa2.71□□□□□ -1.98
CLOCK-201ENST00000309964 WDYHV1Q96HA8 205 aa2.71□□□□□ -1.98
CLOCK-201ENST00000309964 AKIP1Q9NQ31 210 aa2.71□□□□□ -1.98
CLOCK-201ENST00000309964 ZIC3O60481 467 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 SRSF10O75494 262 aaKnown RBP2.7□□□□□ -1.98
CLOCK-201ENST00000309964 THBDP07204 575 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 SFTA3P0C7M3 94 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 STAG3L3P0CL85 134 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 PSG2P11465 335 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 CD59P13987 128 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 HTN1P15515 57 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 ZNF660Q6AZW8 331 aaPredicted RBP2.7□□□□□ -1.98
CLOCK-201ENST00000309964 CD200R1LQ6Q8B3 271 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 C10orf111Q8N326 155 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 SFRP2Q96HF1 295 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 KLF2Q9Y5W3 355 aaPredicted RBP2.7□□□□□ -1.98
CLOCK-201ENST00000309964 COL4A6Q14031 1691 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 OR10J1P30954 320 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 BATF2Q8N1L9 274 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 AQP3Q92482 292 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 TAF15Q92804 592 aaKnown RBP eCLIP2.7□□□□□ -1.98
CLOCK-201ENST00000309964 TNFRSF12AQ9NP84 129 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 KCNE5Q9UJ90 142 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 ZNF106Q9H2Y7 1883 aaKnown RBP2.7□□□□□ -1.98
CLOCK-201ENST00000309964 FNDC10F2Z333 226 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 PATE4P0C8F1 98 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 NEU1Q99519 415 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 FBLN5Q9UBX5 448 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 IGKV3-7A0A075B6H7 116 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 A0A1B0GTL3 188 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 SSTR5P35346 364 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 TAS2R60P59551 318 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 OR10W1Q8NGF6 305 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 OR10AC1Q8NH08 325 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 ORAI1Q96D31 301 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 ZMAT4Q9H898 229 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 IL17BQ9UHF5 180 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 ZNF256Q9Y2P7 627 aaPredicted RBP2.7□□□□□ -1.98
CLOCK-201ENST00000309964 NPIPB9F8W1W9 429 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 J3QKU1 62 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 BCL2P10415 239 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 VAMP3Q15836 100 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 LYPD1Q8N2G4 141 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 SRD5A3Q9H8P0 318 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 YAE1D1Q9NRH1 226 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 ATG2AQ2TAZ0 1938 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 TRAV21A0A0B4J279 112 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 RBMY1BA6NDE4 496 aaKnown RBP2.7□□□□□ -1.98
CLOCK-201ENST00000309964 RBMY1EA6NEQ0 496 aaKnown RBP2.7□□□□□ -1.98
CLOCK-201ENST00000309964 NPIPB7O75200 414 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 RBMY1DP0C7P1 496 aaKnown RBP2.7□□□□□ -1.98
CLOCK-201ENST00000309964 RBMY1A1P0DJD3 496 aaKnown RBP2.7□□□□□ -1.98
CLOCK-201ENST00000309964 RBMY1CP0DJD4 496 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 CACNG7P62955 275 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 CX3CL1P78423 397 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 HIST1H1AQ02539 215 aaPredicted RBP2.7□□□□□ -1.98
CLOCK-201ENST00000309964 CDCP2Q5VXM1 449 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 XAF1Q6GPH4 301 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 TMEM144Q7Z5S9 345 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 FBLIM1Q8WUP2 373 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 LPAR5Q9H1C0 372 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 FOXJ2Q9P0K8 574 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 TRGV11A0A075B6L2 103 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 TRGV2A0A075B6R0 118 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 SRRM5B3KS81 715 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 HRKO00198 91 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 ITGB1BP1O14713 200 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 NBEAP1P0C6P0 100 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 SMIM18P0DKX4 95 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 SUCLG1P53597 346 aaKnown RBP2.7□□□□□ -1.98
CLOCK-201ENST00000309964 ABLIM2Q6H8Q1 611 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 TOMM20LQ6UXN7 152 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 IL17DQ8TAD2 202 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 SMIM12Q96EX1 92 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 MS4A3Q96HJ5 214 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 WNT5BQ9H1J7 359 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 PRDM6Q9NQX0 595 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 GPR132Q9UNW8 380 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 SIGLEC5O15389 551 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 PRKNO60260 465 aaPredicted RBP2.7□□□□□ -1.98
CLOCK-201ENST00000309964 NUDT3O95989 172 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 CYB5R3P00387 301 aaPredicted RBP2.7□□□□□ -1.98
CLOCK-201ENST00000309964 CRPP02741 224 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 MGPP08493 103 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 OR8D4Q8NGM9 314 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 SGMS2Q8NHU3 365 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 PRADC1Q9BSG0 188 aa2.7□□□□□ -1.98
CLOCK-201ENST00000309964 MRPS18BQ9Y676 258 aaKnown RBP2.7□□□□□ -1.98
CLOCK-201ENST00000309964 TCRBV4S1A1TA0A5B7 111 aa2.69□□□□□ -1.98
CLOCK-201ENST00000309964 PSMB11A5LHX3 300 aa2.69□□□□□ -1.98
CLOCK-201ENST00000309964 FABP5P3A8MUU1 101 aa2.69□□□□□ -1.98
CLOCK-201ENST00000309964 IGKV1D-33P01593 117 aa2.69□□□□□ -1.98
CLOCK-201ENST00000309964 IGKV1-33P01594 117 aa2.69□□□□□ -1.98
CLOCK-201ENST00000309964 APCSP02743 223 aa2.69□□□□□ -1.98
CLOCK-201ENST00000309964 UCP1P25874 307 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms